Camponotus floridanus (Florida carpenter ant): 105249735
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Entry
105249735 CDS
T03919
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo04382
Cornified envelope formation
cfo04512
ECM-receptor interaction
cfo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105249735
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105249735
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105249735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfo04147
]
105249735
00536 Glycosaminoglycan binding proteins [BR:
cfo00536
]
105249735
Exosome [BR:
cfo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105249735
Glycosaminoglycan binding proteins [BR:
cfo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105249735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Chitin_bind_4
Motif
Other DBs
NCBI-GeneID:
105249735
NCBI-ProteinID:
XP_025261703
LinkDB
All DBs
Position
Unknown
AA seq
2388 aa
AA seq
DB search
MLRRATAALFTLVIATSVSQLTQEPRSSNRDNDVILNISDDQKVQYLSQNIDSDAYKYGY
DVGPNGQFHHEVRGPDGITYGCYGYIDPFGELKSTFYISDGWGYRVVRPGKDVELFLHKH
EHHETGTDHDHHEHHGVITPWRELYFPAVCARYANINGRPPVKPDGTAPIGSGSTIDVKP
TELPHRPGVPEYPGIPGTPGTPGLPPQPGYPGTPGTPGTPGTPGTPGKPGTPAYPGTPGT
PGTPGTPGLPPQPGYPGTPGTPGKPGTPAYPGYPGTPGTPAAPGTPGLPPQSGYPGTPGT
PGTPGTPGRPGTPAYPGQPGTPGTPGTPGLPPQPGYPGTPGTSGTPGTPGKPGTPTYPGY
PGIPGTPGAPGIPGLPPQPGYPGTPGTPGTPGTPGRPGTPAYPGQPGTPGTPGTPGLPPK
PGYPGTPGTPGTPGTQGRPGTPAYPGQSGTPGTPGTPGLPPKPGHPGTPGTPGTPGTPGR
PGTPAYPGQPGTPGTPGTPGLPPQPGYPGTPGTPGTPGTPGKPGTPAYPGYPGTPSTPGA
PGTPGLPPKPGYPGTPGTPGTPGTPGRPGTPAYPGQPGTPGTPGAPGLPPQSGYPGTPGT
PGTPGTPGKPGTPAYPGYPGTPGTPGGPGTPGLPPQPEYPGTPGSPGTPSTPGKPGTPAY
PAQPGTPGIPGTPGTPGTPGLPPQPGYPGTPGTPGKPGTPAYPGRPGTPGIPGIAGTPGL
PPQPGYPGTPGTPGTPGTPGRPGTPAYPVQPGTPGIPGTPGTPGLPPQPGYPGTPGTPGK
PGTPPYPARPGTPGISGTPGTPGLPPQPEYPGTPGTPGTPGTPGRPGTPAYPGRPGTPGI
PGIPGTPGLPPQPGYPGTPGTSGTPGTPGRPGTPAYPVQPGTPGIPGTPGTPGLPPQSGY
PGTPGTPGRPGTPAYPGRPGTPGIPGTPGTPGLPPQPGYPGTPGTPGTPGTPGKPGTPAY
PAQPGTPGIPGTPGIPGLLPQPGYPGTPGTPGTPATPGRPGTPAYPGRPGTPSIPGTPGT
PGLPPQPGYPGTPGTPGTPGTPGKPGTPAYPAQPGTPGIPGTPGIPGLPPQPGYPGTPGT
PGTPGTPGRPGTPAYPVQPGTPGIPGTPGTPGLPPQSGYPGTPGTPGRPGTPDYPGRPGT
PGIPGTPGTPGLPPQPGYPGTPGTPGTPGTPGKPGTPAYPAQPGTPGIPGTPGIPGLPPQ
PGYPGTPGTPGTPGTPGRPGTPAYPGRPGTPGIPGTPGTPGLPPQPGYPGTPGTPGTPGT
PGKPGTPAYPAQPGTPGIPGTPGIPGLPPQPGYPGTPGTPGTPGTPGRPGTPAYPGRPGT
PSIPGTPGTPGLPPQPGYPGTPGTPGTPGTPGKPGTPAYPAQPGTPGIPGTPGIPGLPPQ
PGYPGTPGTPGTPGTPGRPGTPAYPGRPGTPGIPGTPGTPGLPPQPGYPGTPGTPGRPGT
PAYPGRPGTPGIPGTPGTPGLPPQPGYPGTPGTPGTPGTPGKPGTPAYPAQPGTPGIPGT
PGIPGLPPQPGYPGTPGTPGTPGTPGRPGTPAYPGRPGTPSIPGTPGTPGLSPQPGYPGT
PGTPGTPGTPGKPGTPAYPAQPGTPGIPGTPGIPGLPPQPGYPGTPGTPGTPGTPGRPGT
PAYPGRPGTPGIPGTPGTPGLPPQPGYPGTPGTPGTPGTPGKPGTPAYPAQPGTPGIPGT
PGIPGLPPQPGYPGTPGTPGTPGTPGRPGTPAYPVQPGTPGIPGTPGTPGLPPQSGYPGT
PGTPGRPGTPAYPGRPGTPGIPGTPGTPGLPPQPGYPGTPGTPGTPGTPGKPGTPAYPAQ
PGTPGIPGTPGIPGLLPQPGYPGTPGTPGTPGTPGRPGTPAYPGRPGTPGIPETPGIPGL
PPQTGYPGTPGTPGTPGTPGRPGTPAYPGRPGTPGISGTPGVPGLPPQPGYPGTPGTPGS
PGIPGKPGYPPYPGYPGYPEGPIGPVGPEGPDGSIGDIGGIGGVGGEGGEGDVGSDGPDG
PWPTGSPGPNGPWPGDPGYKPKVKPTSRSWHKEPIRNQYSRIYPLTNTDNYNPVRKYYLN
KIDSSYKGNVAKDTELSKLPYIKTPLYTDYEQYKPQYEAETIPSIYEKGRSIYNADEINS
LSQTGPTSPSLQYNGEDYENIDLEKLTSRAYDDTNHFGLRNQIKKPAKNDFKQFFTHDED
QYQKSEFNSPHNLQQLPSKGRLSKSGRQESVFNVNEQYDNLTDVDKKSIPNLSFQSDGPF
SVPEKQVNARLEHSFQANPGLDAIGVQPPNSINVKPFSLPIGPDPQACPCYLIESNNNTN
VSASTTPIPVIGQVGFIPVIFVPYCPGDETDSNKMKVMFPSVTPVPYACEACGTQDGNFG
IKTLDVNQLGNINYLKQVLSQANLGFLNVPVKSSAERRRSRGRKTRQE
NT seq
7167 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcgtgctaccgctgctctcttcaccctggtgattgctacatccgtgtcgcaa
ctcactcaggaaccaagaagcagtaatcgggacaacgatgtgattctgaatattagcgat
gatcaaaaggttcaatatttgagtcaaaatattgattccgatgcgtataaatacggttat
gatgtcggaccaaatggccaattccatcatgaagtgcgtggaccagatggtatcacttac
ggatgttatggttacattgatccgttcggtgaactaaaatcgacattttacatcagtgat
ggatggggttaccgcgttgttcggcccggaaaggatgtggaattattccttcacaagcac
gaacatcatgaaactggaaccgatcatgatcatcatgagcatcatggtgtgattacacca
tggcgagaattatattttcccgcagtatgcgcgcgatacgcaaacataaacggtcgacct
cctgtaaaaccagatggaacagcacctattggaagtggatcaacgatagatgtgaaacca
actgagcttcctcataggcctggtgtacctgaatatcctggtattcctggaaccccgggt
actccaggtttgccaccacaacccggatatcccggcacgcctggaacaccaggaacacct
ggtaccccaggcacaccaggtaaaccaggaacaccagcttatccaggaactccaggaact
cctggtactccaggcacaccaggattgccaccacaaccaggatatcctggcaccccaggc
acgccaggtaaaccaggaacaccagcttatccaggatatcctggaactcctggtactcct
gcagctccaggcacaccaggattgccacctcaatcaggatatccgggcacgcctggtacg
ccaggaacacccggcacaccaggaagaccaggaacaccagcttatccggggcaaccagga
actcctggtactccaggcacaccaggattgccaccacaaccaggatatcccggcacgcca
ggaacatccggcaccccaggcacgccaggtaaaccaggaacgccaacttatccaggatat
cctggaatccctggtactcctggagctccaggcataccaggattgccacctcaaccagga
tatccgggcacgcctggtacgccaggaacacccggcacaccaggaagaccaggaacacca
gcttatccgggccagccaggaactcctggtactccaggcacaccaggattgccacctaaa
ccaggatatccgggcacgcctggaacgccaggaacacccggcacacaaggaagaccagga
acaccagcttatccagggcagtcaggaactcctggtactccaggcacaccaggattgcca
cctaaaccaggacatccgggcacgcctggaacgccaggaacacctggcacaccaggaaga
ccaggaacaccagcttatccggggcaaccaggaactcctggtactccaggcacaccagga
ttgccaccacaaccaggatatcccggcacgccaggaacacccggcactccaggcacgcca
ggtaaaccaggaacaccagcttatccaggatatcctggaactcctagtacacctggagct
ccaggcacaccaggattaccacctaaaccaggatatccgggcacgcctggaacgccagga
acacccggcacaccaggaagaccaggaacaccagcttatccggggcaaccaggaactcct
ggtactccaggcgcaccaggattgccaccacaatcaggatatcccggcacgccaggaaca
cccggcactccaggcacgccaggtaaaccaggaacaccagcttatccaggatatccagga
actcctggtactcctggaggtcctggcacaccaggattgccacctcaaccggaatatccc
ggcacaccaggatcacccggcaccccaagtacaccaggaaaaccaggaacgccggcttat
cctgcgcaaccaggaactccaggaatacctggcactcctggaactccaggcacaccggga
ttgccaccacaacccggatatcccggcaccccaggtacgccaggaaaacctggaacgccg
gcttatccggggcgcccaggaactcctggcattcctggaatagcaggcacgccaggattg
cccccacaacccggatatcccggcacaccaggaacacccggcaccccaggtacaccagga
agaccaggaacaccggcttatccagtgcaaccaggaactcctggcattcctggaacccca
ggcacaccgggattgccaccacaacccggatatcccggcacaccaggaacaccaggaaaa
ccaggaacgccgccttatccggcgcgtccaggaactccaggtatttctggaaccccaggc
acaccgggattgccaccacaaccggaatatcccggcacaccaggaacacccggcacccca
ggtacaccaggaagaccaggaacgccggcttatccgggacgcccaggaactccaggcatt
cctggaatcccaggtacaccaggattgccaccacaacccggatatcctggcacgccagga
acatccggcactccaggcacaccaggaagaccaggaacaccggcttatccagtgcaacca
ggaactcctggcattcctggaaccccaggcacaccaggattaccaccacaatccggatat
cccggcacaccaggcacaccaggaagaccaggaacgccggcttatccgggacgcccagga
actccaggcattcctggaactccagggacaccgggattgccaccacaacccggatatcct
ggcacgccaggaacacccggaactccaggcacaccaggtaaaccaggaacaccagcttat
ccggcgcaaccaggaactccaggtattcctggaactcctggaataccgggattgctacca
caacccggatatcccggcacgccaggaacacccggcactccagccacaccaggaagacca
ggaacgccggcttatccgggacgcccaggaactccaagcattcctggaaccccagggaca
ccgggattgccaccacaacccggatatcctggcacgccaggaacacccggaactccaggc
acaccaggtaaaccaggaacaccagcttatccggcgcaaccaggaactccaggtattcct
ggaactcctggaataccgggattgccaccacaacccggatatcccggaacgccaggaaca
cctggtactccaggcacaccaggaagaccaggaacaccggcttatccagtgcaaccagga
actcctggcattcctggaaccccaggcacaccaggattaccaccacaatccggatatccc
ggcacaccaggcacaccaggaagaccaggaacgccggattatccgggacgcccaggaact
ccaggcattcctggaaccccagggacaccgggattgccaccacaacccggatatcctggc
acgccaggaacacccggaactcctggcacaccaggtaaaccaggaacaccagcttatccg
gcgcaaccaggaactccaggtattcctggaactcctggaataccgggattgccaccacaa
cccggatatcccggaacgccaggaacacctggtactccaggcacaccaggaagaccagga
acgccggcttatccgggacgcccaggaactccaggcattcctggaaccccagggacaccg
ggattgccaccacaacccggatatcctggcacgccaggaacacccggaactccaggcaca
ccaggtaaaccaggaacaccagcttatccggcgcaaccaggaactccaggtattcctgga
acgccaggaataccgggattgccaccacaacccggatatcccggaacgccaggaacacct
ggtactccaggcacaccaggaaggccaggaacgccggcttatccgggacgcccaggaact
ccaagcattcctggaaccccagggacaccgggattgccaccacaacccggatatcctggc
acgccaggaacacccggaactccaggcacaccaggtaaaccaggaacaccagcttatccg
gcgcaaccaggaactccaggtattcctggaacgcctggaataccgggattgccaccacaa
cccggatatcccggaacgccaggaacacctggtactccaggcacaccaggaagaccagga
acgccggcttatccgggacgcccaggaactccaggcattcctggaaccccagggacaccg
ggattgccaccacaacccggatatcctggcacgccaggaacaccaggaagaccaggaacg
ccggcttatccgggacgcccaggaactccaggcattcctggaaccccagggacaccggga
ttgccaccacaacccggatatcctggcacgccaggaacacccggaactcctggcacacca
ggtaaaccaggaacaccagcttatccggcgcaaccaggaactccaggtattcctggaacg
cctggaataccgggattgccaccacaacccggatatcccggaacgccaggaacacctggt
actccaggcacaccaggaagaccaggaacgccggcttatccgggacgcccaggaactcca
agcattcctggaaccccagggacaccgggattgtcaccacaacccggatatcctggcacg
ccaggaacacccggaactccaggcacaccaggtaaaccaggaacaccagcttatccggcg
caaccaggaactccaggtattcctggaacgcctggaataccgggattgccaccacaaccc
ggatatcccggaacgccaggaacacctggtactccaggcacaccaggaagaccaggaacg
ccggcttatccgggacgcccaggaactccaggcattcctggaaccccagggacaccggga
ttgccaccacaacccggatatcctggcacgccaggaacacccggaactccaggcacacca
ggtaaaccaggaacaccagcttatccggcgcaaccaggaactccaggtattcctggaact
cctggaataccgggattgccaccacaacccggatatcccggaacgccaggaacacctggt
actccaggcacaccaggaagaccaggaacaccggcttatccagtgcaaccaggaactcct
ggcattcctggaaccccaggcacaccaggattaccaccacaatccggatatcccggcaca
ccaggcacaccaggaagaccaggaacgccggcttatccgggacgcccaggaactccaggc
attcctggaaccccagggacaccgggattgccaccacaacccggatatcctggcacgcca
ggaacacccggaactccaggcacaccaggtaaaccaggaacaccagcttatccggcgcaa
ccaggaactccaggtattcctggaactcctggaataccgggattgctaccacaacccgga
tatcccggcacgccaggaacacccggcactccaggcacaccaggaagaccaggaacgccg
gcttatccgggacgcccaggaactccaggcattcctgaaactcctggaataccgggattg
ccaccacaaaccggatatcccggcacgccaggaacacctgggaccccaggcacaccagga
agaccaggaacgccggcttatccgggacgcccaggaactccaggcatttctggaactcca
ggcgtaccaggattgccaccacaacccggatatcccggcacaccaggaacacccggcagc
ccaggcattccaggaaagccaggttatcctccttatcccggttatccagggtatccggaa
ggtccaataggtccagtaggtccagaaggacctgacggctcaattggcgatatcggtggg
attggtggtgtaggtggtgaaggaggagaaggagacgttggatctgatggacctgatggt
ccatggccaactggttcaccgggtcctaatggaccttggcctggtgatccaggatataag
cccaaagtaaagccaacaagtagatcttggcataaggaaccaataagaaatcaatattct
agaatttatccacttactaatactgacaattataatccggttagaaaatattatctcaac
aagattgattcttcgtacaaaggcaatgtagcaaaagatactgaattgtcaaaattacca
tatataaagacaccattatatacagattatgaacaatacaaacctcaatatgaggccgaa
actattccatcaatctacgaaaaaggaaggagcatttataatgcagatgaaatcaattca
ctttcgcaaactggtccgacatcgccatcattgcaatacaatggcgaagattatgaaaac
atagatttagaaaagctgacttcacgagcttatgatgatacgaatcattttggattaaga
aaccaaataaaaaaacctgcgaagaatgatttcaagcaattttttactcacgatgaagat
caatatcagaaatcagaattcaattcgcctcataacttgcaacagctaccttccaaaggt
cgattgagtaaatcagggcgacaagagagtgtgtttaatgttaacgaacaatacgataat
cttaccgatgtggataagaaatcgattcctaatctatcttttcagtcggatggacccttc
agtgttccggaaaagcaggtaaatgcacgtcttgaacattcattccaggcgaatcccggc
ctcgacgctattggggttcagccacccaattccatcaacgtcaagcccttttcgttacct
atagggccagatccgcaagcatgtccttgttatttaatcgagtcaaataataatacaaac
gtatcggcaagcacgactcccatccctgtcattggtcaagtcggattcatacctgttata
tttgtaccatattgtcccggtgatgaaaccgacagcaataagatgaaagtcatgttccca
tccgttactcctgttccatatgcatgcgaagcatgtggcacacaagacggtaatttcgga
ataaaaacgctcgatgtaaatcagcttggcaatatcaattatctcaagcaggtgttaagt
caagccaatcttggctttttgaatgttccagtgaagagcagcgccgaacgaaggaggagc
agaggcaggaaaacgaggcaggaatga
DBGET
integrated database retrieval system
