Camponotus floridanus (Florida carpenter ant): 105250018
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Entry
105250018 CDS
T03919
Name
(RefSeq) ATP-dependent RNA helicase bel
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105250018
03041 Spliceosome [BR:
cfo03041
]
105250018
03036 Chromosome and associated proteins [BR:
cfo03036
]
105250018
Enzymes [BR:
cfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105250018
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105250018
mRNA cycle factors
Common to processing body (P body) and stress granule
105250018
Spliceosome [BR:
cfo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105250018
Chromosome and associated proteins [BR:
cfo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105250018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Motif
Other DBs
NCBI-GeneID:
105250018
NCBI-ProteinID:
XP_011254168
UniProt:
E2A9Y0
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MSNAANQNGSGLEQQLAGLDLQGSRQGRYVPPHLRHKAASNPPLDLNYSSNSRSFGERDR
GGDRDRERDRDRDRGRGGYRESRSPRDVDFANFGSFGGRNRRSQENGRDFRYSNSERDRP
ISGNDRWQEPTRNDRWPETRNDRMGSSGRWDDRSSRGGRGEVDWTIPTARDERLEVELFG
TGNTGINFSKYEDIPVEATGENIPPHITSFDEVKLTEIIKNSIALAGYDKPTPVQKYAIP
IIIGRRDVMACAQTGSGKTAAFLVPILNQIYESGPRPPPVQANSSGRRKQYPLGLVLAPT
RELATQIYDEARKFAYRSRMRPAVVYGGSNIVDQMRELDRGCHLLVATPGRLVDMLGRGK
IGLHNCRYLVLDEADRMLDMGFEPQIRRIVQEDNMPPTGERQTLMFSATFPKEIQMLARD
FLSNYIFLAVGRVGSTSENITQKIVWVEEHDKRSYLLDLLQASNFSDPSAESLTLVFVET
KKGADMLEEYLATMGYPVTSIHGDRTQREREEALRRFRAGKAPILVATAVAARGLDIPHV
KHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNHKNHNLVRDLVSLLIEANQELPPW
LDDMYTEARYSGSSSRRPTGGTKGGRFSGGGFGARDYRQQPSSGSGRSNGPSRPGGYGGG
YSSYGGNYNNSAYNNSTNNGNSGPDWWGGWDK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgcagccaaccagaatggatcaggtctagagcagcagttagctggtctggac
ttgcagggctcccgccagggtcgctacgttccaccgcatcttcgtcataaagctgcaagt
aatccacctttggatttaaattattcttccaactcaagatcgtttggtgagagagacaga
ggtggagatcgtgaccgagaaagggaccgtgatcgggatagaggtagaggcggttatcga
gaatcacgaagtcctcgcgacgtcgatttcgcgaactttggaagcttcggtgggcgcaat
aggcgcagtcaagaaaatggaagagatttcagatattccaattctgagcgcgatcgacca
attagtggtaatgatcgctggcaggagcctactagaaatgatcgctggccagagactaga
aatgacaggatgggtagtagcggaagatgggacgatagaagcagcagaggcggaagaggc
gaggtcgattggacaattccgactgccagggatgaacgattggaggtggagctgtttggt
actggcaatactgggattaattttagcaaatatgaggatatcccagttgaggctaccgga
gaaaatataccaccacacatcacatcttttgatgaggttaagctgacagagataataaag
aacagcatcgccttggcaggatatgacaagcctacaccagtgcagaaatacgcgataccg
atcatcatcggacgccgtgacgtgatggcctgcgctcaaacggggtccggtaaaacagcg
gccttcctagtgccaatattgaatcagatttacgagagcgggccgcgaccgccaccagta
caagcgaattcctctggtagacgtaaacagtatccattgggtctagtattggctcctacg
agggaactcgctacgcagatatacgatgaggcgcggaagtttgcgtaccgatcgcgtatg
cgtcccgcagtcgtatacggcggttccaacatagtagatcaaatgcgcgaattagatcgc
ggttgccatttacttgtggcgacgccaggacgtctagtggatatgttgggacgcggtaaa
atcggtttacataattgccgatatttagttctggacgaggcagatcgcatgctggacatg
ggtttcgagccgcaaataagacgtatcgtccaagaagacaacatgccgccaactggagaa
agacaaactctcatgttctctgctacttttccgaaagagattcagatgttggccagagat
tttcttagcaattatatcttcttggccgttggtcgagtgggttcgacttccgaaaatatc
acgcagaagattgtgtgggtggaggaacacgataaacgttcatacttgcttgatttgcta
caagctagcaacttttcggacccttctgcagagtcgcttactttggtattcgtggaaaca
aagaaaggagccgacatgcttgaagaatatttggccacaatgggatatccagttactagc
attcatggcgacagaacccagcgtgaacgagaggaagccttgcgtcgcttccgcgcgggt
aaagcaccgattctagttgcgactgcagtagcggcacgtggtctcgatataccacatgtt
aaacatgtcatcaattttgatttgcctggcgacgttgaggaatacgttcatcgtattggt
cgtaccggtcgtatgggcaatttaggtttggctacatcgttcttcaatcacaagaatcat
aatctggtacgcgatttggtgtctttacttattgaagccaatcaagaacttccaccctgg
ctggatgacatgtataccgaagctaggtattctggaagctcatctcggcgtcctactggt
ggcaccaaaggaggccgtttcagcggcggcggttttggtgcaagagattatcgtcaacaa
cccagttctggatctggccgtagtaacggaccttcaagacctggcggttatggaggtggt
tattcaagttatggaggtaattataataattcagcgtacaataattccactaacaatggc
aatagtggccctgattggtggggaggatgggacaagtag
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