Camponotus floridanus (Florida carpenter ant): 105250180
Help
Entry
105250180 CDS
T03919
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfo03021
]
105250180
03036 Chromosome and associated proteins [BR:
cfo03036
]
105250180
Transcription machinery [BR:
cfo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105250180
Chromosome and associated proteins [BR:
cfo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
105250180
SLIK complex
105250180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_Hrp3
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
DEAD
Myb_DNA-binding
Tudor_4
Motif
Other DBs
NCBI-GeneID:
105250180
NCBI-ProteinID:
XP_011254445
LinkDB
All DBs
Position
Unknown
AA seq
1803 aa
AA seq
DB search
MQKTLESESGKESGSDSENDSKSDSSSSGSNSGSASGSDSDSSSSSGSGSGSGSDSEKSE
KSDAPAAQSDSFQSKSSNHSTETKLRVKHESSREWDENPDIYGIRRSGRSRKEPDRLATN
RESDSDGRKKFKKKGSHNSWNSESSDSESDEIENRRPPPSKSLNRRAAQKAKEKAKVRKK
RISESSENSSFDSDDNRRQVTRRTGTAVSYKEESEEGTDSEDLVEVEESNAASAEPDNAE
TIEQILGQRMGKKGVTGNVTTIYAVEENGDPNPKDLSNVETEVQYWIKWKGWSHIHNTWE
SEESLKTQKVKGLKKLDNFIKRERRLEQMRECIESEDLEYLECQLELKNQLLKSYNNVER
IIADYKKPDSEHPDYFCKWENLPYAEATWEDGALIVKKWPEKIKEFRDREDSKRTPSKHC
KVLKSRPKFYQLNEQPTYMGKEKDLVLRDYQMDGVNWMIHSWCKENSVILADEMGLGKTI
QTICFLYYLFHTQQLHGPFLLVVPLSTMTSWQREMALWAPDMNFVIYLGDVNSRNVIREY
EWCYRGSKRLKFNVILTTYEIVLKDKALLGALNWAVLLVDEAHRLKNDDSLLYKALSEFH
TNHRLLITGTPLQNSLKELWALLHFIMPTKFVSWEEFEKQHDNAAQKGYSKLHKQLEPFI
LRRVKKDVEKSLPAKIEQILRVEMTSLQKQYYKWILTKNYDALRKGMKGSSSTFLNIVIE
LKKCCNHAFLTKPNEAEREKGNGDYLQTLIRGSGKLVLLDKLLVRLRDTGHRVLIFSQMV
KMLDILSEYLQKRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLA
TADTVIIFDSDWNPQNDLQAQARAHRIGQKNKVNIYRLVTKNSVEEEIVERAKQKMVLDH
LVIQRMDTTGRTVLDKKNAGTNSNPFTKEDLTVILKFGAEDLFKDEEDGDEEPMCDIDEI
LRRAETRDEGPTTVGDELLSAFKVASFKPTFEEDLEPINQPNDNDDESKDWAEIIPENFR
KKVEEEEKSKEMEDLYLPPRSRKTLQQINQSEGRSRKRKKVQDDSEEGEESGSEVEGSDD
ERPKKRGRPRVLPRENIKSFTDVEIRRFVKSYKKFPAPLKRLEDIAADADLQEKPMSELR
FLGEQLKSRCDMCLVEFENTAKENKTGEEEGKGPGRKRGRGPTFKMGGVMVNAKSFSAAV
KELEPLEQALPSDPEQRANWHLDIKSKPANFDCEWTSEDDSRLLRGIYQHGMGSWEAIKM
DASLELGDKIFPNGSKVQLKRVNARAEYLLKILKKQIDLKLGVARMRKPRKTKEMKTAIT
KEIVEDNDTSGDETKKSKSKNDKSGIKKEEDIVAKKEVKDEIDDLSDDKKKDKKIKKEKK
ENKKAKKNKQAAGPMHFTANNEPRAVDVIGELDPPIFDECKEKMRPVKKALKALDTPDMS
LSEEERVARARRCLYQIGNHINTCLTEYKNPEQISEWKSNLWYFASKFTNFKAKKLYRMY
KNLVKQGGDSNGGTTLSPDKKEDASNTTKKHNERSSHDKQTESSSSNKDSRITKRKIDDT
EENSNSSTQSKKQNISSVSSNISSTSTVTIGAITITPITSTPNSTSSTTNSAETSRHKEQ
KESKHKDMKRDRERDRDRDRGHNDRGMDRISGGKDDRIRRDSGGYNMGHYSGSREDDHWL
PRDGRDMRDGRYGFGDHKRDRFDIYGRMSGGYHRDRDRDRDRGMHMNDKRSDYYRYSSGP
PSYGYNPGNYGDSSGGGGYPPTDIAPGHFRGRGYGGDSYSNWRPNKDYRRDYDRRPPPPN
ANS
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaacattagaatctgaatccggtaaggaatccggatccgattcggagaatgac
agcaaaagcgatagctcctcttctggaagtaatagcggttcagcatcaggatctgatagt
gactctagctcctcgagcggttccggttccggatcaggctctgactcagaaaagtcagag
aagtcagatgcacctgctgcacaaagcgatagcttccagagcaaaagctcgaatcacagc
acagaaacaaagcttagagttaaacatgagtctagccgtgaatgggacgagaatcctgac
atatatggcatcaggagatcgggacgttccaggaaggaacctgacaggctcgcgacaaat
cgcgagagcgacagcgatggtcgcaagaagtttaaaaagaaaggttcacacaattcctgg
aattctgaaagttcagattccgaatctgacgaaattgaaaatcgaaggccgcctcctagc
aagtctttaaacagacgcgcggcgcaaaaagcaaaagagaaagccaaagtgcgaaagaag
cgaatttctgaatcttctgaaaattcttcctttgatagtgatgacaatagaaggcaagtc
actagacggactggcacagcagttagctataaagaagaaagtgaagaaggaactgatagt
gaagatttggttgaagttgaagaatcgaatgctgcatcagcagaacctgataatgcggaa
actattgaacaaattttgggacagagaatgggcaagaaaggagttaccggcaacgtgaca
acaatttatgctgtcgaagaaaatggcgatcccaatccaaaggatctaagtaatgtagag
accgaagtacaatattggataaaatggaaaggttggtctcacatacacaatacatgggaa
tcagaggaatctttgaaaacacaaaaggtgaaaggattaaaaaagttagacaattttatc
aaacgtgaacgtagactggaacagatgagagaatgtattgaatcagaagatttggaatat
cttgaatgtcaattggaacttaaaaatcaacttttgaaaagttacaacaacgttgagaga
attatagctgattataagaaaccagactcggaacatcctgattatttctgtaaatgggag
aatctaccatatgctgaggctacatgggaagatggagctttgatagtgaagaaatggcca
gaaaagataaaagaatttcgcgacagggaggattctaaaagaacaccaagcaaacattgt
aaagttcttaaatctagacctaaattttatcaattgaacgaacagcctacttatatgggc
aaagaaaaggatttagtattgagggattatcaaatggatggagttaattggatgattcac
tcttggtgtaaggaaaacagtgttatattagctgacgagatgggtctcggcaaaacaatc
caaacaatatgcttcctttattatctttttcacacgcaacaacttcatggaccgttttta
ttagtagttcctctgtcaacaatgacttcctggcaaagagaaatggctctatgggcacct
gatatgaatttcgtcatttatttgggtgatgtcaattcgcgcaatgttattagagaatat
gaatggtgctatcgaggatcgaagagattaaaattcaatgtcatacttacaacgtacgaa
atagtacttaaagataaagcactgttgggtgccttaaattgggcagtactgctagtggat
gaagctcatcgattaaaaaacgacgattctcttctgtacaaagcacttagcgaatttcac
accaatcatcgtttgttgatcactggtactccattacagaacagcttgaaagaattgtgg
gctttattacacttcattatgcctaccaaattcgtctcatgggaagaatttgagaaacaa
catgataatgctgcacaaaaaggatactccaaactacataagcaattggagccatttatt
ttgcgcagagttaaaaaggacgttgaaaaatctttacccgctaaaattgagcaaatttta
cgggtagaaatgacttccctgcaaaaacaatattataaatggatattgactaaaaattac
gatgcattaagaaaaggcatgaaaggatccagttcgacatttttgaacatcgtgatcgaa
ttaaaaaaatgttgcaatcatgcttttcttacaaaaccgaacgaggccgaaagggaaaaa
ggcaatggggattatttgcagacactcatccgtggttccggaaaattagtacttttagat
aaattattagtgagattgcgtgatactggacacagagtactaatattcagtcagatggtc
aaaatgttagacattctcagtgaatatctgcaaaaaagacatttcccattccaaagatta
gatggcagtataaaaggggaactgaggaaacaggcattagatcacttcaatgctgaagga
tcacaggatttttgtttcctattgtcaacgcgagccggcggtctcggcattaatcttgcc
actgcggatactgtgataattttcgattccgattggaatccgcaaaatgatttgcaagct
caggccagagcacaccgaataggacaaaagaataaggtcaatatttatcgactggttacc
aaaaattctgtcgaggaagaaatcgtagaacgtgcaaagcagaaaatggtcttggaccat
ttagtgatacagcgaatggatacaaccggacggacggtattggataagaagaatgcaggg
accaatagcaatccatttaccaaagaagatttaactgttattttgaaattcggcgcagag
gatctgtttaaagatgaagaagatggagatgaagaaccaatgtgtgatatcgatgaaata
ttaagaagagctgaaacaagagatgaaggtccgacgacagttggcgatgaattattgtcc
gcttttaaagtagctagttttaaacctacttttgaagaagatttggaacctattaatcag
ccgaatgataacgatgatgaaagtaaagactgggctgaaatcattccggaaaactttcga
aagaaagtagaagaagaagagaagtcgaaggaaatggaagatctttatttgccaccgaga
agtcggaaaacacttcagcaaatcaatcagagcgaaggaagaagcagaaagcgtaaaaag
gtacaggatgatagcgaagaaggggaggagtcgggtagcgaggtggagggtagtgacgat
gaaagacctaagaaaagaggtagaccgagagtcttgccgcgcgagaacatcaagagtttc
acagatgttgagatacgaagattcgttaaaagttataaaaagttcccggcacccttgaaa
cgattggaagatatcgcagctgatgctgatttacaagagaaaccaatgtcggaattgcgc
ttcttgggcgaacaattgaaatctagatgcgacatgtgcttagtcgaatttgagaacacg
gcgaaagagaataaaactggcgaggaagagggcaagggacctggtcgtaagagaggacga
ggacctactttcaagatgggcggtgttatggtgaacgcgaaatcattttcagccgcagtt
aaagaacttgaacctttggagcaagctttgccatccgatcccgagcaacgcgccaattgg
cacctcgacattaaatcaaagccagcaaactttgattgtgagtggacttccgaggatgat
tcgagattattaagaggtatatatcaacatggcatgggttcgtgggaagcaataaaaatg
gacgctagtttggaattgggagataagatttttcctaatggcagtaaagtacaactcaaa
cgtgtgaacgcacgtgcggaatatcttctgaagattttgaagaaacagattgatcttaag
ttaggagtggcacgaatgagaaaaccaaggaagactaaggaaatgaaaacagcaatcact
aaagagattgtagaagataatgatacttctggtgacgaaactaagaaatcaaaatctaaa
aatgataaatctggaattaagaaagaagaagatattgttgcaaagaaagaagtaaaggat
gaaattgatgatttatctgatgataaaaaaaaggataagaagattaaaaaagaaaagaaa
gagaacaagaaagcgaagaaaaataagcaagccgcaggtcctatgcattttactgcaaat
aacgaaccaagagctgttgatgtaattggtgaattggatcctccaatatttgatgagtgt
aaggaaaaaatgaggccagtgaagaaagcattaaaggctctggatacaccagatatgtct
ctgagcgaggaggagcgagtcgctcgtgcgcgtcgatgcctttatcaaatcggaaaccat
atcaatacatgtcttacggaatataaaaatcctgaacaaataagtgaatggaaaagtaac
ctctggtactttgcttcaaagttcacaaatttcaaagcaaagaagctttatagaatgtat
aagaatttggtaaaacaaggtggcgatagcaatggcggtactacattgagtcctgacaaa
aaagaagatgcttccaatactacaaagaaacataatgaaagatcgtctcacgataaacag
acggaaagtagcagcagtaacaaagacagcagaataacgaaacgtaaaattgacgatact
gaggagaattcaaatagtagtacacaaagtaagaaacagaatatttctagtgtcagcagc
aatatcagcagcacgtccaccgttactatcggtgctattacgattactcctataacatca
acgccaaattccacatcaagtactactaacagcgcagaaacatcacgacataaagagcaa
aaagaatcgaagcataaagatatgaaaagagatagggagcgtgacagagatcgagataga
ggacacaatgataggggtatggataggataagcggaggaaaggacgacaggatcagaaga
gacagtggaggatataatatggggcattatagtggcagcagagaggacgatcattggtta
cccagagatggaagagacatgagagacggcaggtacggattcggagatcacaaacgcgat
cgcttcgatatttatggccgaatgtcaggcggttatcacagagatagagatagagatcga
gatcgtggtatgcacatgaatgacaagagaagtgattattaccgatattcgtcgggaccg
ccaagttatggatacaatccgggtaattatggcgatagtagcggtggtggcggttatcct
ccaacggatatcgcaccgggtcattttagaggtcgcggatatggaggagatagctattct
aattggcggccgaacaaggattataggcgagactatgatagaaggccaccaccaccaaat
gccaactcctag
DBGET
integrated database retrieval system
