KEGG   Camponotus floridanus (Florida carpenter ant): 105250265
Entry
105250265         CDS       T03919                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
cfo  Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105250265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cfo03041]
    105250265
   03036 Chromosome and associated proteins [BR:cfo03036]
    105250265
Spliceosome [BR:cfo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105250265
 Complex B
    105250265
 Complex C
   U2 SnRNP specific factors
    105250265
Chromosome and associated proteins [BR:cfo03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    105250265
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG DUF2298
Other DBs
NCBI-GeneID: 105250265
NCBI-ProteinID: XP_011254565
LinkDB
Position
Unknown
AA seq 1301 aa
MDSIPRTHKDIEAQIREIQSKKKELLNTTSEKEQVALGKTGFYDQDIYDDNKFDGYVTSI
ATNDEIEDYDPFADKRLPTVADREEKDYDPFADRRRPTIADREDEYRQKRRRMIISPERV
DPFAEGGKTPDIGSRTYTEIMREQMLKGEETELRKRLVEKAKEGTLKANGEPKPAPKKRG
RWDQTDDTPVQKKLSGTSATPTSWDNADVTPAAVRWDETPGHGKGAETPGATPGVSTRMW
DATPAHATPGAATPGRETPSHEKTVTSRRNRWDETPKTERETPGHNSGWAETPRTDRVAG
DLIQETPTPSASKRRSRWDETPSNQTPGSMTPQTPATPLTTPHQTTILTPSATTPTGPKA
MGLATPTPGHLMSMTPEQLQAYRWEREIDERNRPLSDDELDALFPPGYKILQPPAGYIPI
RTPARKLTATPTPIAGTPQGFFIQTEDKSAKYIDNQPKGNLPFMKPEDAQYFDKLLVDVD
EETLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPT
LEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKA
AGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKAVCRSKKSWQARHT
GIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITALAIAALAEAATPYGIES
FDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEE
MKKIVLKVVKQCCATDGVEAQYIKDEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIANK
VGASEIINRVVDDLKDENEQYRKMVMETIEKIMGNLGAADVDSRLEEQLIDGILYAFQEQ
TTEDVVMLNGFGTIVNTLGKRVKAYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMK
TCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPI
LKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGY
IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNV
QNGVLKSLSFLFEYIGEMGKDYIYAVSPLLEDALMDRDLVHRQTACAAIKHMALGVYGFG
CEDALIHLLNHVWPNVFETSPHLVQAFMDAVDGLRVALGPIKILQYTLQGLFHPARKVRD
VYWKIYNSLYIGGQDALVAGYPRIMNDPKNQYIRYELDYVL
NT seq 3906 nt   +upstreamnt  +downstreamnt
atggactccattccgaggacgcataaagatattgaagcacagataagagagatacaatcg
aaaaagaaggagcttttaaatacaacatctgagaaagaacaggttgctttgggaaagact
ggattttatgatcaagacatctatgatgataataaatttgatggctatgttacatcgatt
gcaaccaacgatgaaattgaagattatgatccatttgcggacaaacgactacccaccgta
gcagatagagaggagaaagattatgatccatttgcggacagacgacgacctactatagct
gatagagaagatgaatacaggcaaaaaagacgtagaatgattatctctcctgaacgtgtt
gatccatttgctgaaggtggtaagacacctgacattggttctagaacatatactgagatt
atgcgagaacaaatgctcaaaggtgaagagacagagctaagaaaaagattagtagaaaag
gctaaagaaggtactctaaaagccaatggcgaacctaaaccagctcccaaaaagagaggc
cgttgggatcagacagatgatactccagtgcagaaaaagttatctggtacttcagcaaca
cccacatcttgggataatgcagatgtgacgccagctgctgttagatgggatgaaactcca
ggccatggtaaaggagcagaaactcctggagctactccaggagtgagtacaagaatgtgg
gacgctactcctgcgcatgcaacgccaggagctgcgactccaggaagagaaacgccttct
catgaaaaaacagtaacgagtcgaagaaatcgttgggatgaaactccaaaaactgaaaga
gaaactcccggacataacagcggttgggcagaaactccgagaactgatcgtgttgctggg
gacttaatacaagagactccaacaccttcggcgagcaaacgaagaagtcgatgggacgag
acgccgtcgaatcaaacgccaggctcgatgacgccgcaaactccagcaacacctctaaca
acacctcatcagacaacgatattgactccaagtgctaccacaccgacgggacccaaggca
atgggtctggctactccaactccaggacatttaatgtccatgacacctgaacaattgcag
gcttaccgttgggaacgcgagatagatgagcgaaatagacctctctcggatgatgagttg
gatgcactgtttccacctgggtacaagatcttgcaacctccggcaggatatatacctatt
cgtacacctgctagaaaactcacggcgacacccacgcccatcgctggtacacctcaaggt
ttcttcattcaaacggaagacaaaagcgccaagtacatagataatcagccgaagggtaat
ttaccattcatgaaaccggaagatgcgcagtattttgataagttgctagttgatgtggac
gaagaaacgctgagtcctgaagaacaaaaagaaagaaaaattatgaaattgcttttgaaa
attaaaaacggaactccaccgatgcgcaaagctgcgttacgacaaattactgacaaagcg
agggaatttggcgccggaccactctttaatcaaattctccctcttctcatgtcaccgact
cttgaagatcaagaacgtcatcttttggtcaaagtcatcgatcgcattctgtataaactc
gacgatttagtacggccgtatgtacacaagattctggtcgtcatcgagcctctattgatc
gacgaggattattatgctcgtgtcgaaggcagagagattatttctaatttggcaaaagcc
gcaggactggctacaatgatctccacaatgagaccagatatcgataacatcgatgaatac
gttcgtaatacaacagcaagagcattcgctgttgtagcatccgctctcggaatcccttca
cttcttccattcttaaaagctgtttgtcgcagcaaaaaatcctggcaagcgcgacatact
ggtatcaagatcgtgcaacaaatagctatattgatgggttgtgccattttgccacatttg
aaaagcttggtggaaattatagagcatggtttggtggacgagcagcaaaaagtacgaaca
attactgcgttagccatcgccgcactggctgaagcagcaacaccttatggtatcgaaagt
tttgactctgtgctaaaacctctttggaagggtattcgtacgcacagaggaaaaggatta
gcagcgttcctaaaagctatcggttatctcatccctcttatggatgcggagtatgcgaac
tattatactagggaagtaatgttaattcttatacgtgaatttcaatctcctgatgaagaa
atgaagaaaattgtgttgaaggtagtcaaacaatgctgtgcaactgatggtgtagaagct
caatatataaaggatgaaattttgcctcacttctttaaacacttttggaatcatcgtatg
gcactagatcgtagaaattacagacagcttgtggatacaacagtagaaatagccaacaaa
gtgggcgcatcagaaattattaatagagtagtagatgacttaaaggacgaaaatgaacaa
tatagaaaaatggtgatggaaaccattgaaaaaataatgggcaacttaggagcggcggat
gtcgattctcgtctagaggaacagcttattgatggaattttatacgcctttcaggagcaa
acaaccgaggacgttgttatgctgaacggtttcggtacaattgtgaacacattgggtaaa
agagtgaaggcgtatcttccacagatatgtggtacaatattgtggagattgaataacaaa
tctgcaaaagtcagacaacaagctgcagatcttatttcgcgcatcgcagtggttatgaag
acctgtcaagaggaaaaacttatgggacatctgggagtcgttctgtatgaatatttaggc
gaagaatatccagaagtattaggtagcattttaggagcgttaaaagctatcgttaatgtt
ataggaatgacgaagatgacaccacctatcaaagatttgttaccaaggcttacacccatc
ctgaaaaacagacatgaaaaggtacaagaaaattgtattgatcttgtgggtagaatcgca
gatcgaggtcccgagtatgtttccgcgcgagaatggatgagaatatgtttcgaattgttg
gaattattgaaggcacataagaaagctattagaagagctacggtgaacacttttggttat
atcgcgaaagctattgggccgcacgatgtcttagcgacacttttaaacaatttaaaagta
caggaacgtcaaaatcgtgtttgtaccacagttgctattgccatagttgctgaaacttgt
agtccgttcacagtattaccggcattaatgaacgagtatagggtacctgagttaaatgta
cagaacggagtgttgaaatccttgtcgttcttattcgaatatattggggagatgggtaaa
gattacatttatgctgtcagcccattgctagaagatgcgcttatggacagagacttggta
cacagacagacagcttgtgctgctattaaacatatggcattaggtgtatacggatttgga
tgtgaagatgcgttgatacatttattgaatcatgtgtggcccaatgttttcgagacttcg
ccgcatttagtccaggcgttcatggatgctgtggatggattacgtgtcgcgcttggacca
atcaaaattttgcaatacacattacaaggtttattccatccagcccgtaaagttcgtgac
gtttattggaagatatataattctctttacattggcggacaggatgctcttgtagctggt
tatcctcgtatcatgaatgatccaaagaaccaatacataagatatgaattagattatgta
ttataa

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