Camponotus floridanus (Florida carpenter ant): 105250269
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Entry
105250269 CDS
T03919
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105250269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfo03009
]
105250269
Ribosome biogenesis [BR:
cfo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105250269
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
105250269
NCBI-ProteinID:
XP_011254571
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MAEFVEKRCQDMIPQLEQMKRIKLFDKNEIRNISKKLKEHEYKIQRQTKCKEDYLRYIQY
EMDLLKLIKQRRDKYGINQNKSDIEFAITAKMNKLYEDAICNFQDDIRFWIAYVKFCKHI
HSYSNISKILNKMLQVNRDKPKCWHIVAHWELEENKNKQSARQYLLRGLEIHPDSQLLYI
DIFKLELENRLTVAPNNSENNESKEDNLAMENDEIPFSLRTAYIVYQQAFECIKNVKFII
ELLNIAKEYNDTEKLQKKIISDMIREYTLEPLMWDTMARRELQGLNDIPMEIENSEQTSL
RDRITSCTKVYQTAVKKIKNEEMWSLYIECLLEINHDLQSLRNFKRKLLKTALMQAHQAK
KLNEKYYLHWIDMLNVDKERDENARKKFFEVLCEATDIIPNSVNLWHARISHLLQSGQEK
EVDAIFPKMTQILEEQALPLWKMRILHSQIRSSKEAEENFRAALEVHPLIANGIRPIWLE
WLVLTKGIRAAREEYKKLVLQPPNSLEFHMKMIALEYLQPEISLKHMRYVYDVMTHQFGA
ENMSIWIDYCSFEMKHGDPKKPGEIYKRAINVLNRNLIETFMEDYGILLTKFPAK
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatttgtggaaaaacgatgtcaggatatgatacctcagttggagcaaatgaaa
aggatcaaactttttgataaaaatgaaattcggaacatttctaagaaactcaaagaacat
gaatataagattcaacgacaaacaaagtgtaaggaggattatctccgttatatacaatat
gaaatggatcttttaaagttgattaaacaacgtagagataaatatggtattaaccaaaat
aagtcagacattgaatttgctataactgctaaaatgaataagttgtacgaagatgcaata
tgtaattttcaagatgatattagattttggattgcttatgtgaaattttgtaagcatata
cattcttacagtaatatcagcaaaatattaaataaaatgttgcaagtgaacagagataag
ccaaagtgctggcacatagtggcacattgggaattggaagaaaacaaaaataaacaaagt
gctcggcaatatcttcttagaggcttagaaattcatcctgattctcaattgttgtacatt
gatatttttaaattagaactagagaatcgtttaactgtagctcctaataacagtgaaaac
aatgagagtaaagaagataatttggcaatggagaatgacgagataccattctcactaaga
acagcatacattgtatatcaacaagctttcgagtgtatcaagaatgttaaatttataata
gagttgcttaacattgcaaaggaatataatgacacagagaaattgcaaaagaaaattatt
agtgatatgattcgagaatatactcttgaacctttaatgtgggatacaatggcacgtcgt
gaattgcaaggtcttaacgatataccaatggaaatcgagaattccgaacagacttccctg
agagatcgcattacgtcctgtaccaaggtttatcaaaccgctgtaaagaaaattaaaaat
gaagaaatgtggtcattatacatagaatgtttactggagatcaatcatgacttgcaatcg
ttaagaaatttcaagaggaaactcttgaaaactgctttgatgcaggctcatcaggcaaaa
aagctgaacgaaaaatattatttacattggatcgatatgttgaacgtcgacaaagaacgc
gatgagaatgctcgaaaaaaatttttcgaagtgttgtgcgaagcaactgatattatacca
aatagcgttaatctttggcacgcgcgaatcagtcatttgttgcaatctggtcaggagaaa
gaggtggatgctatatttcccaagatgacgcaaattttggaagaacaagcattacctctg
tggaaaatgcggattttacacagtcaaataagaagctcaaaggaagctgaagagaatttc
cgagcggctttagaggtgcatccattaatcgccaatggtatcaggcccatatggctggaa
tggcttgtcttaacgaaaggtatccgtgcagctcgcgaagaatacaagaagcttgtcctg
caacctcccaactcattggaatttcatatgaaaatgatcgcgctggaatacttacagccg
gaaatttcgctaaaacacatgcggtatgtttacgatgtgatgacgcaccaattcggagca
gaaaacatgtctatctggatagattattgtagcttcgagatgaagcatggagatccgaag
aaacccggcgaaatatataagagagcaatcaacgtgttgaatcgcaatttaatagagacc
tttatggaagattatggtatacttttaactaaattcccagcaaagtga
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