Camponotus floridanus (Florida carpenter ant): 105250531
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Entry
105250531 CDS
T03919
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105250531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfo03041
]
105250531
Spliceosome [BR:
cfo03041
]
Complex B
Other components
Prp19-related factors
105250531
Complex C
105250531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
RRM_occluded
zf_CCCH_4
Torus
RRM_YTH1
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Nup35_RRM_2
zf-CCCH_10
zf-CCCH_12
RRM_3
DUF5092
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
105250531
NCBI-ProteinID:
XP_011254996
UniProt:
E2ABI2
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MATSKTTNTYNRQNWEDAEFPILCQTCLGDNPYIRMTKEKYGKECKICMRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALKIKDDLPRSDVNKEYYVQN
IDNEIGKIDPTTPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLDPPEDKSITTLYIGNLG
DILTEKQLRDHFYQYGEIRSVTMVPRQQCAFIQYTQRNAAEAAAERTFNKLILGGRRLTI
KWGRSQGRQTISATEAMREILEPVPGLPGALPPPPETMGNNFFNLQTTPGMMPPMMIPPP
PVAPQFMFPPQMAASAATPIFPPGTTPIHYPSQDPSRMGASQGIGKPWPEE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggctacatcgaaaactaccaatacatataacagacaaaattgggaggatgctgaattt
ccaatattatgtcagacatgcttaggagataatccatatattcgtatgacaaaagagaaa
tatggaaaagaatgcaagatatgtatgcgaccatttacagtatttagatggtgtcctgga
gcaaggatgcgatttaaaaagactgaagtctgtcagacatgtagtcgattgaaaaatgtt
tgtcaaacatgtttattagatttggaatatggtctgcctattcaagttcgtgatgctgct
ttaaagattaaagatgatttgccacgttcagatgtaaataaagaatattatgtacaaaat
atagacaatgaaattggaaaaattgatccaacaacgccagctggtgctgttggcaaatct
gccgcagctagtgatctcttaatgaaattggctagaacgagtccatattacaagagaaat
agaccacatatttgttcattttgggtaaaaggtgaatgtaagagaggcgaagaatgtcct
tatcgacatgaaaagccaacagatcctgacgatccattagctgatcagaacataaaagat
cgttattatggcgtgaatgatccagtggcagacaaacttatgcgaagagcggcagctatg
cccaagctcgatccacctgaagataaatctatcacgacattgtatattggcaatttaggt
gatatactgacagagaaacaattgcgcgatcatttctatcaatatggtgagatacgttcg
gtaactatggtgccacgtcaacaatgtgccttcatccaatatacgcaaagaaacgctgcc
gaggcagcggcagaaagaacgttcaacaaattgatattgggtggaagacgactcactata
aaatggggccgttctcagggaaggcaaacaatatccgcaacagaagcaatgagagagatt
ctcgaacctgttccgggattacctggagcattaccaccaccaccagaaactatgggtaat
aattttttcaacctgcagaccacgcctggtatgatgccgccaatgatgattccaccaccg
cctgttgcacctcaatttatgttcccgccacaaatggcggcttcagctgcgacgccgatt
ttccctccaggaacaactcctatacattatccaagtcaagatccatccagaatgggtgca
tcacagggtataggcaaaccttggccggaagaatag
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