Camponotus floridanus (Florida carpenter ant): 105250551
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Entry
105250551 CDS
T03919
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03018
RNA degradation
cfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105250551
09123 Folding, sorting and degradation
03018 RNA degradation
105250551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105250551
03041 Spliceosome [BR:
cfo03041
]
105250551
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105250551
mRNA degradation factors
5'-3' decay
Lsm complex
105250551
Spliceosome [BR:
cfo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105250551
Complex C
U2 snRNP components
105250551
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
105250551
NCBI-ProteinID:
XP_011255014
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MLFYSFFKSLIGKDVVVELKNDLSICGTLYSVDQYLNIKLADISVTDSEKYPHMLSVKNC
FIRGSVVRYVQLPVDEVDIHLLTEAARREAMNAQAR
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgttattctactccttcttcaaatccttgatcggaaaggatgtggttgtggagttaaaa
aatgatcttagtatttgtggaacattatattccgtcgatcagtacctgaacataaaatta
gccgatattagcgtaacagattctgaaaaatatcctcatatgttatcggtaaaaaattgt
ttcatccgtggatctgtagtacgatatgtgcaacttccagtagacgaagtagatattcat
ctcttaactgaagcagcacgcagagaagcaatgaatgctcaagcaagatag
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integrated database retrieval system
