Camponotus floridanus (Florida carpenter ant): 105250627
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Entry
105250627 CDS
T03919
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105250627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105250627
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105250627
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
105250627
NCBI-ProteinID:
XP_011255117
UniProt:
E2ABT4
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MIEIDKKDCKKLLTRRMLLAVVSSITLQFFLVCCLILFTNLSTDYVHWLQNTWRTVISLR
MWIYLGILAAVISLQGVFCSKIYLHNPPYYKSRFAKLCATLTVQNLSLKASYIVMGGILT
WSHLSLKGGMYSSLTADCSIIYGTCLVEEYYFLLFSGLWSGLYFSVKTNDSMKYFRFPII
TQFKFFRLRQGIYAMLPNLMISSMWSAVYYMTIYYFLGSYCRAALLSMISIQTEVEPLDN
MSRLLNLTLILHLWLHQFIFILTISSTYLLFEIYLTEWISFKFSSSGVYNGDASELTLIE
ALAMDKIPIIQHLGYLDLVTLAQKEKMRRGILFTLSQPGGHPYNWNCIVQKCIDLLKKFS
SDFNAISMKPQEQQFCYSTNVLTTRIAPVRPAQKEHIYHMRKLVPDVTPVPSIEVDTKEA
PYSGMFIQKFIKQKREAFVAYLLSKPLINYIFGEQDDNKIRYVLLNGQLVIWAAEAISSL
SVFSLSEDSYGVVQKDVPNIINTLLSVKQVLDKLQKSAVLARKIQTDDKLTKEICTSLRS
AIKRSLYRIITNFEPYVNDLSLESLTIEQLQSFLNYKE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgacaaaaaggattgcaaaaaacttttgacgcggcgaatgttgctggct
gtcgtctcaagcataacattgcaattttttctagtctgctgcctcatcctatttacaaac
ctgagcactgattacgtacattggcttcaaaacacgtggagaactgtaatatcactacga
atgtggatttatctcggcattctcgccgcagtgatctctttacagggtgttttctgcagc
aaaatttatctccacaatccaccatattataagagcagatttgccaaattatgtgcgact
cttacagttcaaaacttaagtttaaaagcctcgtatatcgtcatgggtggcattttaacc
tggtcgcatttgtcattaaaaggaggaatgtacagttctttgactgcagattgtagtatc
atatatggaacatgtttggtggaggaatattattttttgctgttcagtggtttatggagt
ggattatatttctccgtaaagactaatgactctatgaagtatttccgatttcccattata
acacagtttaaatttttccggctgcgacaaggaatttatgctatgcttccaaatctaatg
atttcctccatgtggtcggctgtgtattatatgactatttattactttctgggatcatac
tgtcgtgcagcactattgtcaatgatttctatacaaacagaagttgaacctttggacaat
atgtctagattgctaaatctgacattaatattgcacttgtggcttcatcaattcatattc
atactgacaataagcagcacttacttgttatttgaaatatatctaactgaatggatttca
tttaaatttagttcgagtggtgtctataatggtgatgcttcagaattaacacttattgag
gcgctagcaatggacaagataccgataatacaacacttgggttatttagatttagttacc
ttagcccaaaaggagaaaatgagaagaggaatattatttacactcagtcaaccaggtggt
catccatacaattggaattgcattgtgcaaaagtgcattgatcttcttaagaaattctct
tctgatttcaacgctatatccatgaaacctcaagagcaacaattctgttatagtacaaat
gtattgacaacaagaattgcacctgtacgacctgcacaaaaagagcatatatatcatatg
cggaagttagtaccagatgtaacaccagtgccatcaatagaagtagatacaaaagaagct
ccttatagtggcatgtttattcaaaagtttattaaacaaaaacgagaagcctttgtagca
tatttgctttccaaaccacttattaattatatctttggtgaacaagacgataataaaatc
cgttatgtattacttaatggacaactagtgatttgggcagctgaagctatttcatcatta
tcggtgttttcgctcagtgaagattcttatggtgttgtacaaaaagatgtgcccaacatt
atcaatactttgttgtcagtgaagcaggttctggacaaattgcaaaaatcagctgtatta
gcaagaaaaattcaaactgatgataaattaactaaagaaatttgtacctctttacgaagt
gcgatcaaacgtagtctatatagaattattacaaactttgaaccgtatgtcaatgattta
tcccttgaatcactgacaattgaacaattgcaaagctttcttaattataaggaataa
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