Camponotus floridanus (Florida carpenter ant): 105250669
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Entry
105250669 CDS
T03919
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo04140
Autophagy - animal
cfo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105250669
04148 Efferocytosis
105250669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfo04131
]
105250669
Membrane trafficking [BR:
cfo04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
105250669
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_HPS5
WDR55
Beta-prop_EML_2
TPR_7
zf_RING_Vps8_fungal
zf-RING_Vps41
Vps39_1
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
zf-RING_5
zf_RING_Vps8
TPR_12
Beta-prop_WDR19_1st
PEP5_VPS11_N
TPR_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
105250669
NCBI-ProteinID:
XP_025267656
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MESTSSKEEQNNQEDSDSSEMDEVEPRLKYIRIRNDLEHILQNDAASCIAVHPKFLCLGS
HWGMIHLLDHQGNNVKSKTLQAHTVAVNQISIDHNGDFIASCSDDGKVFIYGLYSTEDNH
NMSMGRLVKSIAIDPNYYKSGSGRRFITGDDKLVLYEKTFLARMKPTVLCEAEGGVKSVA
WSGRFVAWASDTGVRVYDLDARCSLGLIKWSRTPDTLPEHYRCNLQWSDSKTLLIGWVDI
VRICHIRKRTMQEMVNRDLPEFVVDPVSTFQVDFYISGIAPLKNQLVLLGCLKELDEDGK
NQRPTLHVVEPKYQDFSVLCANSLTLRGYKEYSCNDYHLDCLKEENRFFIVSPKDIVVAS
LYDTDDRIEWLLSHGKFEQALEAVTTNNGKDCKRHTVLDVGRIYLDHLLAYEKYDEAGKL
CLKILGRNKKLWEEEVYKFARLHQLRSISSYLPRGDVTLDPLVYEMVLYEYLKMDPDGFL
QLVKEWSPTLYTVAAVVNGVLEHLLVHNQRQNVLLEALAILYIHDGKYDKALAMYLKLRH
KDVFQLIQKYQLYNSVYDMIEGLMDLDTERAIQFFLEKDRVASDVIVQKLQHNHRYLYLY
LDALDKRDTKDSKGKYHGLLVRLYADYSRDKLLPLLRRSDNYPIQQALDICSQRQFYPEM
VYLLGRIGNTSEALALMTRELDDMESAIAFCQEHDDEELWNDLVNYSLDKPTAITFLLQK
IGTYVDPRLMVQRIEPTLEIPGLKKALVKMMCDYNLQVSVQEGCKKILSNDYFNLHERLV
RCQQKGIFVDDDQMCGACHRKIIVRELRNIVVFYCKHCFHEDCLPNFEFVENCVICNSQE
MTLGRK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggagtccacatctagcaaagaggagcaaaacaatcaagaagattcagattcttcagaa
atggatgaggtagaacccagactaaagtatatacggatacgcaatgatttagaacatatt
ctgcaaaatgatgcagctagttgtattgctgtgcatccaaagtttctctgtttgggatca
cattggggaatgatccatcttctagatcatcagggtaataatgtaaagtctaaaacacta
caggcacatacagtggcagttaatcaaatctccatagatcataatggggacttcatcgct
tcttgcagtgatgatggaaaagttttcatttatggattatacagtacagaggataatcac
aatatgagcatgggtagactagttaaaagcatagcaattgacccaaattattataaaagt
ggcagtggcagaagatttattacaggtgatgacaagttggtgctctatgaaaagactttt
ttggccaggatgaagccaacagtactctgtgaagcggaaggtggagtcaaatccgttgca
tggtctggtcgctttgtagcatgggcctctgatactggtgtgagagtctatgatctcgat
gctagatgttcattgggacttatcaaatggtctcgtactccagatacattgccagagcac
tatagatgcaatttacagtggtcagacagtaaaacattgttaattggatgggtggacatt
gtacgcatttgtcatatcagaaaacgtaccatgcaggagatggtgaatcgagatttgcct
gaatttgtagtagatccagtatctacatttcaagtagatttttatatatctggtatagcg
ccattgaaaaatcaattggtattgctgggatgcttaaaagaattagacgaagatggaaaa
aatcaacgtccgacactgcacgtggttgaaccaaaatatcaggatttttcagtgctatgt
gcaaactcacttactctacgtggctacaaagaatacagctgcaatgattatcatttggat
tgtttaaaggaggaaaataggttttttatcgtaagtccaaaagatatcgtggtagctagt
ttatacgatacagatgacagaatcgaatggttattgagccacgggaaatttgagcaagct
ttagaagcagtaacaacgaacaatggcaaagattgcaaaaggcatactgtattagacgtg
ggacgaatttatttggatcacttgttagcatatgagaaatatgatgaggctggaaaactt
tgcctgaaaattctaggaagaaataaaaagttgtgggaagaagaggtttataaattcgcc
agactgcaccagttacgctctatttcatcttatttgcctcgaggcgatgtcacccttgat
ccactagtgtatgagatggtgctatatgagtatttaaagatggatcccgacggtttcttg
cagttggtcaaagaatggtctccaaccttatacacagtggcagcggtagttaatggcgta
ttggagcatttactagtccacaatcaacgacagaatgtattattggaagcattagctatt
ttatacatccatgatggaaaatacgataaagcactcgccatgtacttgaaactgcgacac
aaagacgtctttcagctgattcagaagtatcagttgtataattctgtttatgatatgatc
gaaggtctaatggatctagacactgaacgtgccatacaattttttttggaaaaagataga
gtagcatctgatgtcattgtacagaaattacaacataatcatcgttatttatacttgtat
ttagatgccttagacaagagagatactaaagactctaagggcaaatatcatggcttacta
gtgcgactatatgctgattattcaagagacaagttattgccgcttctacgtcgctctgat
aattatccaatacaacaagctttagatatctgtagccagcgtcaattttatccggaaatg
gtgtatttgttgggcaggataggaaacacttctgaagctttggcgctcatgacgagagaa
ctcgacgatatggagagtgcgattgcattttgtcaagaacacgatgacgaagaattatgg
aacgatctagttaattactcgctcgacaaacctacggcaattacatttcttcttcaaaag
attggcacctacgttgatccccgacttatggtacaaaggatagaacctactttggaaatt
ccagggctgaagaaagcattagtcaaaatgatgtgcgattataatctgcaagtatctgtt
caagaaggttgcaaaaagatactatctaatgattatttcaatctccatgaacgacttgtt
cgttgtcagcaaaaaggcatatttgtcgatgatgatcaaatgtgtggagcttgccatagg
aagataattgtaagagagctacggaatatagttgtattttattgtaagcattgttttcac
gaggattgtctacctaactttgaatttgttgaaaattgtgtgatatgcaactcgcaggag
atgacacttggcagaaaatga
DBGET
integrated database retrieval system
