Camponotus floridanus (Florida carpenter ant): 105250778
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Entry
105250778 CDS
T03919
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03008
Ribosome biogenesis in eukaryotes
cfo03013
Nucleocytoplasmic transport
cfo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105250778
03015 mRNA surveillance pathway
105250778
03008 Ribosome biogenesis in eukaryotes
105250778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105250778
03009 Ribosome biogenesis [BR:
cfo03009
]
105250778
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105250778
mRNA cycle factors
Stress granule specific factors
105250778
Ribosome biogenesis [BR:
cfo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105250778
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
RRM_NXF1-2
LRR_4
LRR_8
LRR_NXF2
LRR_9
Motif
Other DBs
NCBI-GeneID:
105250778
NCBI-ProteinID:
XP_025264822
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MPKKSNKIWGWGGRNGRGNVPSEDKHYFGHDDRTGRNNGRPHDGTRPRVSFKTHRPNREI
PRNALLATLLDEDIPMTGNSNNNNRQIRQVVVPRDRDRTWQRTIGRGRNSPLPNRNFKGG
QPGSRIQTLAIGESNWYKISIPYGHKYEKDYILRTLLNYMAPEVFIPITYKIMGTEASFY
VDNYKTANALLNCDRKITMTDGFKLQVRAKPGVPQCEIDDKLKEQLKQAMSKRYVQETNA
LDLSKFHQDPDLGDYFCALFRPAMLMTVLDIVSEHIPNLEALNLEGNKLQSIDRLNVLNK
KFSNLKILYISDNKIKDIHQIDAIKDLKLEELKLIGNPLCNKYKSRQNDYISDVRKRFPR
LLRLDGTELPRPIVFDVVDDTAKIPSSQRMFVADAKAQEIASQFLQQYFTIFDSESRQPL
LDAYDEHACFSMTISTSHNNKLNGYLMENRNLFRIYDTARRQKLLKHGRLPVVSFISEMP
RTRHFLDTFTMDIALATQVMMFITITGYFQELDNKEQPIRHFNRTFIIVPEGRGYCIRNE
QLHISQPPEAQLKQLNQQLNSQPTQPEVSALLPQTSTQSAKPVELSEDIKQQMTMTLSQQ
TNMNLEWSLKCLQETQWNYDNALSAFQEFFKRGQIPSEAFTK
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaaatcgaataagatctggggctggggtggtcgcaacggccgtggaaatgtt
ccctccgaggataagcattattttggccatgatgatcgtacgggaagaaataatggacgg
cctcatgacggaactagacctcgtgtttcctttaaaacacatagacccaatagagaaata
ccacgtaacgcattgcttgcaaccttgctagatgaggatattccaatgacaggcaatagc
aataacaataatagacaaataagacaagtagttgttccaagagatagagataggacatgg
caaagaacgattggtcgaggaagaaatagtcctctaccaaataggaattttaagggaggc
caacctggttctagaatacaaacacttgcaataggagaatccaactggtataaaatcagt
ataccatatggacacaaatatgaaaaagattacattttaagaaccttattaaactatatg
gcacctgaagtattcattcccataacgtataagataatgggaactgaagctagtttctat
gttgacaattataagacagcaaatgcattattaaattgtgatcgtaagattacaatgaca
gatggttttaaattacaagtaagagcaaaaccaggggttccacaatgcgagattgatgat
aaattgaaggaacaattaaaacaagctatgtccaaaagatatgttcaagaaacaaatgct
ttggacttgtcaaagtttcatcaagatcctgatcttggtgattatttttgtgcattgttt
cgacctgcaatgttaatgactgtgttagatatcgtcagcgaacatataccaaatttggaa
gccttaaacttagaaggcaataaactgcagagcattgataggctcaatgtgctaaataaa
aaattttcaaacctgaagattttatacatcagcgataataaaatcaaggatattcatcaa
atagatgcaattaaagacctcaaattagaggaattgaaattaattggaaaccccctctgt
aacaagtataagtctcgacaaaatgactacattagcgacgtccggaaacggttcccgaga
ctgctacgtctggacggcacggaattaccacgaccaatcgtatttgatgtggttgatgat
actgctaaaataccatcatcacagcgaatgtttgttgctgatgcgaaagcccaggaaatt
gcaagccagtttttgcaacagtatttcacaatatttgacagtgagagccgtcagcctcta
cttgacgcgtacgatgaacatgcgtgctttagtatgacaatatccacttctcacaataat
aagttaaatggatatctcatggagaaccgaaacttattcagaatatatgatacagcaaga
aggcagaaattattaaagcatggtagattacctgtagtttctttcatatcagaaatgcca
cgaacaaggcatttcctggatacctttactatggacattgctcttgctacgcaagtaatg
atgttcatcacgataacgggctattttcaagaacttgataataaggaacagcccatacgc
cacttcaatcgaacatttataattgttccggaaggcaggggatattgtattcgcaatgaa
caattacatattagtcagccgcctgaggcgcaattaaaacagttgaaccagcaattgaat
agtcaaccgacgcaaccggaagtgtcggcgctattgccacaaacatctacacaatcagca
aaacctgtagaattaagtgaagatataaaacagcaaatgacaatgacgttgagccagcaa
acgaacatgaatttagaatggagtctgaagtgtttacaagaaacacagtggaactatgat
aatgcgctctctgcatttcaagagttctttaaacgaggtcaaataccatcagaagcgttt
acgaaataa
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