Camponotus floridanus (Florida carpenter ant): 105250978
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Entry
105250978 CDS
T03919
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfo03041
]
105250978
Spliceosome [BR:
cfo03041
]
Common components
Common spliceosomal components
General mRNP proteins
105250978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
Nup35_RRM_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
105250978
NCBI-ProteinID:
XP_011255734
UniProt:
E2ACV0
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MRGVSESSPTRAMAEDLDVEAMLEAPYKKGEQDSSSKDKSSKENGSSRKSSGKSKHRSRS
RSRSRDRDRREKDKDRRDRDRDRDRDRDRDRDRDRDRDRRRRSRSRDRRDRDRDRDDRDR
ERRDRDRDRDRRRKRSLTPLTLPRARPPFGKGHSPLGINDELTPEERDARTVFCMQLSQR
IRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPI
VVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLI
MDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLLDTD
ELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANALNMAPVMTQPQPPPQAAPPIATQC
FMLSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAV
AAVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRRGM
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcgtttcagagagctctccgactcgtgcaatggcggaggatttggatgtcgaa
gcgatgctggaggcaccatataagaagggggagcaggactcctcctccaaagacaagtcc
tccaaggagaatgggtctagtcgcaaatcgtctgggaaaagcaaacatcgttcgcgttct
cgttcacgatctcgagatcgcgatcgtcgagaaaaggacaaagatcggcgggatcgagac
agagacagggaccgggatcgtgatcgggacagggatcgcgatcgcgaccgcgaccgtcga
cgcagatcgcgatcacgagacaggcgggaccgcgacagagatcgtgatgatagggacagg
gagaggcgagacagagacagagatagggataggagaagaaagagatcactaacaccactc
actcttcctagagctcgaccaccgttcggcaaaggtcacagtcctcttggaataaatgat
gaattgacaccagaagaacgagatgctcggactgttttttgtatgcaattgagtcagcga
atccgtgcacgagacttggaggaatttttctcgagtgtcggcaaagtgcaagatgttaga
ttaattacatgtaataaaactcgaagatttaagggcattgcttatgtcgaattcaaagat
ccagaaagtgtgacactcgctctcggtctatcaggtcaaaagctccttggagtacctatt
gtagtgcagcatacacaagctgagaagaatcgcatgggcaattcgatgccaaacctaatg
cctaaaggacaaacaggacctatgcgattatatgtaggatctctccattttaatatcaca
gaagatatgcttcgcgggattttcgaaccattcggaaaaattgataatatacaattaatt
atggaccctgagaccggacgtagtaaaggttacggttttctgacattcagaaatgcagat
gatgcgaagaaagctttagaacaattgaatggattcgagcttgctggtagacctatgaaa
gtgggcaatgtaacagaacgaaccgatttgattcaagggccgtctcttctcgatacggat
gaattagatcgtagtggtattgatctcggtgcaactggaagattacaactgatgttcaag
ttggcggaaggtaccggtctagaaattcctcctgctgcagcaaacgctttaaatatggct
ccagtcatgacacaaccacaaccaccacctcaggcagcgcctccaatcgcgacacagtgc
tttatgttatcaaacatgttcgatcctcaaaatgagacaaatcctaattgggcaaaggaa
attcgcgacgatgtaatcgaggaatgtaacaagcatggcggcgtgctacatgtatacgtg
gaccaagcgtcaccgcaaggcaacgtttatgtaaaatgtccgtcgattgcaaccgccgtg
gcggctgtaaattcgctacatggtcgatggtttgccggtcgcgtcataaccgccgcctat
gtgccagtagtgaattatcactctctattcccggacgcgatgaccgcgttgcaattattg
gtgccaagtgcgccgcgaagaggaatgtga
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