Camponotus floridanus (Florida carpenter ant): 105251340
Help
Entry
105251340 CDS
T03919
Name
(RefSeq) RNA-binding protein squid isoform X1
KO
K03102
squid
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
105251340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105251340
03041 Spliceosome [BR:
cfo03041
]
105251340
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105251340
Spliceosome [BR:
cfo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
105251340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_DEAH11
NCBP3
Motif
Other DBs
NCBI-GeneID:
105251340
NCBI-ProteinID:
XP_011256366
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MADQQENKDFSEDIAEQSFEKNGEAESGGTGGGGTGDAVENGQDSQEDRKLFVGGLSWET
TDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMSAGDHVINNKKVD
PKKAKARHGKIFVGGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESE
QVVNELLKTPKQTINGKAVDVKKATPKLDGMGGMRGGMMGRGRGARGGRGRGFGGQGGWG
QGYGGGYGGGYGQGGYGGGYDGYGGYDYYGSGYGGYGSYDYSGYGDGYGYGGGNYDGGYA
GGRGGVRGKGGSGYGGKQRGGGGRQNQRHQPY
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcagcaagagaacaaggacttcagtgaagacatagcggagcaaagtttcgag
aagaacggcgaagccgagagcggcggtaccggtggcggcggtactggagacgccgtggag
aatggccaggactcgcaggaggacagaaaattatttgttggtggcttaagctgggagact
actgacaaggaattaagagaacactttagcacatacggcgacattgagagtattaatgtt
aaaacagatcccaacacggggagatcgagaggttttgcattcattgtcttcgccaaggct
gaagctctcgataagattatgtcagccggtgatcatgtcattaacaacaaaaaagtcgac
cccaaaaaagcaaaagctagacacgggaagatcttcgtcggtggtctttcgacggagctc
tccgacgatgatattaagaacttcttttcacaatttggaaatattgtcgaagtggaaatg
ccattcgacaagacaaagaaccaaaggaaaggtttctgctttattacttttgaatctgag
caggtggtcaatgagctgctcaaaacacccaaacaaaccatcaatggaaaagcggtggac
gtgaagaaagcgacacccaaattggatggcatgggcggaatgcgcggcggaatgatgggc
cgaggtagaggtgctcgtggtggccgtggtcgcggttttggaggtcaaggtggctgggga
cagggttacggaggtggctacggcggcgggtatggtcaaggtggctacggcggtgggtac
gatggttacggaggatacgattactacggcagcggttacggtggttacggaagttacgat
tacagcggatatggtgatggctatggctatggcggtggtaattacgatggtggctacgcg
ggcgggcgcggtggtgtacgcggtaaaggtggctcaggctacggcggcaagcagagagga
ggtggtggtcgccaaaatcagaggcaccaaccatattaa
DBGET
integrated database retrieval system
