Camponotus floridanus (Florida carpenter ant): 105251674
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Entry
105251674 CDS
T03919
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X2
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105251674
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cfo01009
]
105251674
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfo04131
]
105251674
03029 Mitochondrial biogenesis [BR:
cfo03029
]
105251674
Protein phosphatases and associated proteins [BR:
cfo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105251674
Membrane trafficking [BR:
cfo04131
]
Autophagy
Autophagosome formation proteins
ULK complex
105251674
Mitochondrial biogenesis [BR:
cfo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105251674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
105251674
NCBI-ProteinID:
XP_011256931
LinkDB
All DBs
Position
Unknown
AA seq
1294 aa
AA seq
DB search
MLYIFHVDTGTTITFDIKLALESVSQLMEAIERECGVVATHQVLLMSGGECLEPNARVCS
YSAGTDTNPIYLFSKAAIESSLPPTPSIDYGSDVDLQTQIDASLAMPATYQTLCARAHLA
QQCCGLAREQTRICEKLVHDQHLQQQGWAAVVANLEDITQMFQSRAEQFQQAFVLYLAER
QQHTDLLDNFSADLGTLAKIPILPALRAQAEGLLSPDDQPSQSSEPASENPGEMLSLLRW
ISAKDNQSSLEQVADQCSRGLEQFDERLMEALKAEVNAAIDNANKQDMKEIKGLGERLFA
LEQLMVQTKRLVHEQGELAQGFLQNQNRASNLGDASVLPDLCTSHRRQLLVMLQNHNQLR
DIRRRCTKAKEELSVNIYHRLKWIMYVENKMVEVGNKLIIYHESLKRLRRHLEVLQQIHL
APEMYISAVIEVVRRRTFSQAFLVWASNLACQLLTVHSEELARRREFQSKFNGHFLNTLF
PGLEDTPPPFATQAPSVFDNGLPKLTADDMESLRSQLPDLALTISTPDLNNITHFFLSKS
FTEGSSDDIKGKDATSVSIPAKEQERGRAPMLSDRGDFESETDTEEFEKIGQAGADATKP
GVFESAKQKRQKQLEENLGNTREEVERLQSILKTMKIVVCEELNFVRKELTSLRERSNKD
KSGFAEMTERMRVALSLYSRECDRRLQEREQELTLEHEFEITDVKKLIQSHEEEICTLKH
NLLEKETELTEHERLVATMRQKLEDEQIERGNLQTRLHQQLEDYSRILEQARIDKEEAMK
KANDEKFLEITSLTNSLTQCQKRIQELEENLITARNDQERIMKEVTDKFQIEYKTELETI
RSRFKLMAASTMERSPSDSSLERIERTDVIELANHEAILEQAKEDMKVENAMAVRTAIEK
ERADCMTKLDNELKLAKEVVEEKNREIEMYRVRTVALIEQGKRYKNMMDRLIGEFGLTSD
IQQTIKEKVKNLETDKTWLENKETAEKTMQTVMEQNKDTLYPLESEACKDLTYNRLDGSQ
VDLEKVFKDLESEKYEDEVSESKKVRLEANDDDLAHLSRRLEILENDNKRLSCELSSIRA
SKMVVEAKVEALMTDKIRLEIELLKERAKRLFSIDSSLLPSENRDRDMNASVAVVSDSNS
SRDAATSPEPSRRSSSKSICFHPSLPSYIHKKVAEKVAKMVQQGIVTITSCNPGDVVLVV
WDTVHGNYAVYQESSTLYFLHSDYVDALDAGMNSSGSRKCILAEVIDKEYCHARKHENRY
HVPRGTKFYRVRAKPRDVRALTEETGSLSKSQLP
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgctctacatcttccacgttgataccggcactaccatcaccttcgacatcaagctggct
ctagaaagcgtgagccagctgatggaggcgatcgagagggaatgcggcgtagtagcgacg
catcaggtactgcttatgagcggaggcgagtgcctagaacccaatgcacgtgtatgctct
tactcggctggaaccgacacgaatccgatctatctgtttagcaaggctgccattgagagt
agtcttccgcctacaccgagtatagattacggttccgatgtggatcttcagacccagatc
gatgcttcgctggcaatgccggccacctatcagactctttgtgcacgtgcccatctggct
caacaatgttgtggtctggcacgagaacagacaagaatctgcgagaagctagttcatgat
cagcatcttcaacagcagggttgggctgcggtagttgcaaatctcgaagatatcacacaa
atgtttcaatcgcgagccgagcaattccaacaagcctttgttttgtatctcgctgagagg
cagcaacatacggatctcctcgacaattttagtgccgatcttggtactctcgcaaaaatt
cctattctgccggctttgagagcccaagcggagggcctattgagtccggatgatcaaccc
agtcaatcttctgagcccgcttcggagaatcccggggaaatgcttagtctgcttcgatgg
atctcggctaaggacaatcagagcagcctagaacaagtggcggatcaatgttcgcgtggt
ttagagcaattcgatgaacgattgatggaagctttgaaagccgaagtaaacgcggccatc
gacaatgccaacaagcaagacatgaaagaaattaagggcttgggcgagagactgttcgcc
ttagaacagctaatggtgcagaccaagagactcgttcacgaacaaggcgaattggctcag
ggttttttacagaatcagaatcgcgcgagtaatctgggcgatgcaagcgtcctacccgat
ctttgcacttcccatcggcgacaattgctcgtcatgttgcagaatcacaaccagttgcgc
gatatccgtcgcagatgtaccaaggcgaaggaggagctctcggtgaacatctatcatcgt
ctcaaatggataatgtatgtggaaaataagatggtagaagtgggcaacaagttgatcata
tatcacgaaagcctgaaacgattgaggagacatctggaagtactccagcagattcatttg
gctccggaaatgtatataagcgcggtaattgaagtggtaagaaggcgcacgttctcgcaa
gcttttctcgtatgggccagcaatttggcttgccagttgttgacagttcacagcgaagag
ctagcacgtagacgagagtttcagagcaaattcaacggtcactttttgaacaccctcttt
ccgggcctggaggatacgccgccgcctttcgcgacgcaagcaccttccgtttttgacaac
ggactgcccaagctgaccgcggatgacatggaatcattgaggtcacagcttccggacttg
gcattaaccatctctacgcccgatttaaacaacatcacacatttctttttatccaaaagc
tttaccgagggcagcagcgacgatattaagggaaaggatgctacatcggtgagcattcca
gcgaaggaacaagaacgcggtagagcgccaatgttgtccgacagaggggactttgaatcc
gaaacagatacagaggagtttgaaaagatcggtcaggccggcgctgacgcgaccaagccc
ggcgtgttcgagagtgcgaaacagaagcggcaaaagcaattggaggaaaatctcggtaat
actcgcgaggaagtggaaaggttgcaatccattctaaaaactatgaagatagttgtatgc
gaagaattgaatttcgttcggaaggaattgacgagtctgcgagagcgatccaacaaggac
aagagcggtttcgccgagatgacggagcgcatgcgagtggcattatctttatactcgcga
gaatgcgatcgacgtcttcaagagcgcgagcaagaattgacgctcgagcatgagtttgaa
ataacggatgtcaagaagctgatacagagccacgaggaagaaatttgcacgcttaagcat
aatcttctagaaaaggagacagaattaacggagcacgaacgactggtggccacaatgcgt
caaaagctggaggacgaacagattgaaagagggaacttacagactcgtctacaccagcaa
cttgaggattattcgagaatattggaacaagcgcgtatagataaggaagaggctatgaag
aaggcgaatgatgagaagtttctcgagattacctctctgacgaattccttgacacaatgt
cagaaacgaattcaagaattggaagagaatctaatcactgctcgcaacgatcaggagaga
ataatgaaagaggtgactgataagttccaaatagaatataagacggaattggaaaccatt
cgaagtcgcttcaaattaatggccgcttccaccatggaaaggagtcctagtgattctagt
ttagaaaggatcgagcggacagatgttatcgagctggcgaatcacgaggcgattttagag
caagcaaaggaagatatgaaggtagaaaacgccatggcagttcgtactgctatagaaaag
gagagggctgattgcatgacaaaattggataacgaattaaaattggcaaaggaagtagtt
gaagagaaaaatagagagattgagatgtacagagtaagaacagttgcgttgatcgaacag
ggcaaacgttacaagaatatgatggatcgattaattggagaatttggattgacatcggat
atacagcaaacgataaaagagaaggtgaaaaatcttgaaacagacaaaacatggttggaa
aacaaagagaccgcggagaagacaatgcaaacggtcatggaacaaaacaaagatacccta
taccctctggaatctgaagcatgcaaggatttgacctacaatcggttagatggcagtcaa
gtcgatctggagaaagttttcaaggatctagaatccgaaaagtatgaagatgaggtctcg
gaatcaaagaaagtacgattagaggctaatgacgatgatttggctcatctatcgagacga
cttgagattctcgagaacgataacaagagactgtcttgcgaactgagttcaatacgtgcg
agtaaaatggtagtcgaagctaaagtagaagcgttaatgacggataaaattcgtttagaa
attgagttgctgaaggaacgagccaagagattatttagtatcgactcgtcattgttaccc
tccgaaaatcgtgatagagacatgaatgcatcggtcgcggtagtttcagattctaattcg
agtcgagatgcagctacgagtccagaaccaagtcgacgatcatcttccaaatccatatgc
ttccatccttcccttccctcttatatacataaaaaggtcgcggaaaaagtggccaagatg
gtgcaacaggggatcgtcaccattaccagttgcaatccaggtgatgtggtactcgtagtc
tgggacactgttcatggcaattatgcagtgtatcaggaatcctcgactctttattttctt
cattcagactacgtagacgcactggacgcaggaatgaattcaagcggctctcggaaatgc
attctcgccgaagtgatcgataaggaatattgtcacgcgagaaagcatgaaaatcggtat
catgtcccacgtggcacgaaattttacagagtgcgcgctaaaccgcgagatgtacgcgca
ttgacagaggaaacgggttcattgtcaaagagtcaactaccgtaa
DBGET
integrated database retrieval system
