KEGG   Camponotus floridanus (Florida carpenter ant): 105251761
Entry
105251761         CDS       T03919                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit Rpb4 isoform X2
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
cfo  Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03020  RNA polymerase
cfo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cfo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105251761
  09124 Replication and repair
   03420 Nucleotide excision repair
    105251761
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfo03021]
    105251761
   03400 DNA repair and recombination proteins [BR:cfo03400]
    105251761
Transcription machinery [BR:cfo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     105251761
DNA repair and recombination proteins [BR:cfo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105251761
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 CCDC93_CC Minor_capsid_1 GIL1_IRKI_C
Other DBs
NCBI-GeneID: 105251761
NCBI-ProteinID: XP_011257050
LinkDB
Position
Unknown
AA seq 134 aa
MMKFYLLNAKMTNSFAEFENAETLLISEVYMLLEHRKAQNESAEEEQEFSEVFMKSLTYT
NRFGKLKNKETIAAVRSLLMQKKLHKFEIASLANLCPETPEEAKALIPSLEGRLEDEELR
TILDDIQTKRSLQY
NT seq 405 nt   +upstreamnt  +downstreamnt
atgatgaaattttatttattaaacgctaagatgacaaattccttcgcagaattcgaaaat
gcggagacgttattgatatcggaagtttatatgctattagagcacagaaaagctcaaaat
gaatctgcggaagaagagcaagaattttctgaagttttcatgaagagcttaacatacact
aatcgattcggaaaattgaaaaataaggagacaatcgcagccgttagaagtttgttgatg
cagaagaagctacataaattcgagattgcctcgttagctaacttatgtcccgaaactccg
gaggaggcaaaagctcttattcctagtctcgaaggacgtctagaagatgaagaactcaga
acaatacttgatgatatacaaacaaaaagatctctacagtattaa

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