Camponotus floridanus (Florida carpenter ant): 105251775
Help
Entry
105251775 CDS
T03919
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105251775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfo03036
]
105251775
Chromosome and associated proteins [BR:
cfo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
105251775
REST complex
105251775
Heterochromatin formation proteins
Other heterochromatin formation proteins
105251775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Tricorn_C1
Motif
Other DBs
NCBI-GeneID:
105251775
NCBI-ProteinID:
XP_011257086
LinkDB
All DBs
Position
Unknown
AA seq
1522 aa
AA seq
DB search
MKRIRGLDDVASPPARHSTVSAGSGLGGGGGSLEYHTSSGIGVVVPGQAVRSVASKEMPG
SIQFGTAQAQQQYTGAIVVPTAAPSPIKQTSGSAGGLSSTCSSSNINTSGGLNSGLSTGN
SHTMTSQQPTSGSQNQVHTQQQSTIRHKTHTGNVTPLASTPPGSNQGGGGGGSQFQRLKV
EDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIVGFN
TFLPPGYKIEVQANEQGYAFQVSVSIPSPTATHTATLSQHCTVNVGSPPVASPPTQPAKA
PPVLQIMHGSGNIHHTLANSITTNSLTVHAPSPPPVPVYNNSHVSTAQAQAVSQALSQAD
GVSTGGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESGHM
GGTSSGATSGGKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQSSLSAMFQTNKT
TSINDHTAIVKKPIGLKTPYNNSGTISRDLRESGSTAGLERDNRDHRERERERDRSNVRD
INSGQKFGHNTGQLKRSPSFSTSATAGNSHHVQYGSGGPPPLKKPKVASMRDVTIAEAGK
YGTLNDYAFFDKVRKSLRSQDVYENFLRCLVLFNQEIVSKSELVLLVTPFLGRYPELLRW
FKDFLGYLPADSSATTTTNSGNAVGVETFPNSVVRSHQERPQNDLAIEIDYAACKRLGAS
YCALPKSYIQPKCGGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEESIYRCEDERF
ELDVVIETNAATIRVLEGVHKKMNRMSQEEAQKYKLDDCLGGSSPTIHQRAIKRIYGDKS
HDIIEGLKKNPQIAVPIVLRRLKAKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFK
QNDVKALRSKSLFNEIETIYDERHEQGDDGNGDGQGNHGPHLILPYKDKSVLDDAANLLI
HHVKRQTGIHKEDKQRIKLLLKHFIPDLFFHTRQELSDDERDEDDEKEDINVATCNNSQS
ATSTSSLSGLQANRSKASVSPNTSSISVRTEADIKVPIHALSNDPEEAYTLFMASNNWYL
FLRLHHILCERLTKMYDRAVALAEEESKYKQQRKESTAIALRLKPKNEIEIEDYYPAFLD
MVKNVLDGNMESTAYEDTLREMFGIHAYIAFTLDKIVTYAVRQLQHLVTDTICQQCMELF
QREQRQPKESSGAGGLCATAYMRLSAELSYQRKAEKTMVDENCFKIYIYKKDCKMTVELL
DTESDETMDSGCREREREGVTVSEKWSTYVERFSAPAGQASPKDTPALTENEPPTNHPVS
SDQAARGGRGRKRKNTDISKKMDGITWNSLGRSSAGLKPIYLYRNINSYRKHVAKLVKEK
SLLNANHPERVTESVDAPDIINSDETQCRFNPNSYTMFFIAHKDRFLYKQKSINRARMSH
PAVTKRIDSKFHHWHASWISKNCTDTQHRLCQDWLMGRYENLIPHRTRVVTDNDQTRSPY
RQYNRFKVERLQSDLLTSEQCV
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtattcgtggattagacgacgtagcatcaccaccagcaaggcactcaacggtg
agtgcgggaagcggcttaggtggtggaggaggtagcttagaatatcatacaagcagtggg
ataggtgttgttgtacctggtcaagcagttagatctgttgcttcgaaagaaatgccagga
agtatacaatttggtactgcccaagctcaacagcaatataccggtgcaattgttgtgcca
acggcagcaccatcccccatcaaacagacgagtggttctgcgggaggacttagttctaca
tgtagcagtagcaacataaatactagtggtggtttgaatagcggactaagtactggcaat
agtcataccatgacttcccaacaacctacatcaggatcgcaaaatcaagtacatacgcaa
caacaatcgacaataaggcataagacgcatactggtaatgtaacaccactggcttccact
ccacctgggtccaatcaaggaggaggaggaggaggatctcaattccagagattaaaagtg
gaagatgcattatcttacctagatcaagttaaatataaattcagtgatcaaccacaggtg
tacaatgattttttggatattatgaaggaatttaaatctcaaagtatagatactccgggc
gttataacccgagtgagtcatctatttaaaggacatcccgaacttattgttggtttcaac
acatttctcccaccaggctataaaatagaggtacaagcaaacgaacaaggatatgccttc
caagtatctgtcagtataccaagtccaacagcaacgcacacggctacattatctcaacat
tgtacagtcaatgtaggttcacctcctgtggctagtccacctacgcaacctgcaaaagca
cccccagttttacaaataatgcatgggtcgggcaatatacatcatactttagcaaacagt
attacaaccaatagtttaactgttcacgcgccttcaccaccgccggtaccagtgtataat
aattcacatgttagtactgcacaagcgcaagctgtaagtcaagctttaagtcaagcagat
ggtgtatcaactggtggacaaacgcagcaaagtcagccagtagaattcaaccatgcaata
aattatgtcaataaaattaagaatcgtttccaaggtcaaccagacaaatataaacgtttc
ttagagatattgcatacttatcaaaaagaacagagaaatttaaaggaatctggacacatg
ggaggtacaagttctggcgccacaagtggaggaaaacatttaacagaagcggaagtatac
agtcaagtggctaaattattcgaaaatcaagaagacttacttgctgaatttggacaattt
ttgccagatgctactaatcagcaaagttcgttgtctgctatgtttcagactaacaaaaca
acatcgattaacgatcatacggcaattgttaaaaaaccaattggactcaaaacaccttac
aacaattctggaactatttcgagagatcttcgagaatctggtagtacggccggattggaa
cgcgataaccgagatcatagagaacgggaacgagaacgagatagatcaaacgtacgagac
atcaatagcggtcagaaatttgggcataataccggacagttgaagagaagtccatcattc
tcaacttcggcaacagccggaaattctcatcacgtacaatacggcagtggcgggccacca
cctttaaagaaacctaaagttgcttcgatgcgcgatgttactatagcagaagctggcaaa
tatggtaccttaaatgactatgcattctttgacaaggttcgaaagtcactcagatcgcaa
gatgtttatgaaaatttccttcgctgccttgtgctttttaatcaagaaatagtatcgaaa
tcggaacttgttttgttggtgactccgttccttggccgttatccggaactcctacgttgg
ttcaaagatttcctcggttatctacccgctgattcgtccgccacaacaacgacaaactct
ggtaacgcagtaggagtcgagactttcccaaacagtgtcgtacggagtcatcaggaacgg
ccgcaaaatgatttagcgatagaaatcgattatgcagcgtgcaaacgattaggggcatcg
tattgcgcattgccaaagtcgtacattcaaccaaaatgcggtggtagaacgcaattatgt
aaggaagttctcaacgatacatgggtttcatttccaacttggtcagaggatagcacattt
gtaacatcaagaaaaactcaatacgaggaatccatatatcgttgtgaggatgaacgtttt
gaattggacgtcgttatagaaaccaacgcagcaacaattagagtcctcgaaggtgttcat
aaaaaaatgaatagaatgagtcaagaagaagcgcagaaatataagctcgacgattgtctc
ggtggttcttccccgacgattcatcaacgtgcgataaagaggatatacggcgacaaatct
cacgatatcatagaaggtctcaaaaagaatcctcaaatagccgtgcctattgttctacgt
cggttgaaggctaaagaggaagaatggcgagaggcacaaaagggtttcaataaaatctgg
agagaacagaacgaaaagtactacttaaaatccttggatcaccaaggaattaactttaaa
caaaatgatgtaaaagcgttgagatctaaaagtttattcaatgaaattgaaacgatatat
gacgagagacacgaacagggtgatgatggcaatggtgatggtcagggaaaccacggccca
catctcattctaccatacaaagacaaatctgtattagacgatgccgctaatcttttaatt
catcatgtcaaacggcaaactggtatccataaagaagacaagcaacggataaaactttta
ttaaagcatttcatacctgatctctttttccatacacgacaagagcttagtgatgacgaa
agagatgaagatgatgaaaaggaagatataaacgtggcaacatgtaacaattcccaatcc
gcgacaagtacgtcatcgttaagtggcctgcaagctaatagaagtaaggcatccgtatcg
ccaaatacgtcttccatctccgtcagaactgaagccgatatcaaagtacctatacacgct
ctctcgaatgatcccgaggaagcatatacacttttcatggctagtaataattggtacctc
tttttgaggttacatcacatactctgcgagagattaacgaaaatgtacgacagagcagtc
gctctagccgaggaggagtcaaagtataagcagcagcgcaaagaaagtacagcgatcgct
ttaagattaaaaccaaaaaatgaaattgaaattgaggattattatcctgcctttctggat
atggtgaaaaatgttctcgatggaaatatggaaagtacagcgtacgaggacacgttacga
gaaatgtttggtatacatgcctacattgcctttactcttgataagatcgtaacttatgct
gtgaggcaattgcagcacttagtcacagacactatatgccagcaatgcatggaattattc
caaagagagcaacgtcaacctaaagaaagcagcggagctggcggattgtgcgccacggca
tacatgagactaagtgctgaattatcatatcaacgaaaagcggaaaagacaatggtggat
gaaaattgtttcaagatatatatatacaagaaagactgtaaaatgacagtcgagttgtta
gatacagagagcgacgaaacgatggatagtggctgtagagagagagaaagggaaggcgtc
acggtctctgaaaaatggtcgacgtacgttgagagattttctgcaccagctggtcaagct
agcccaaaagacactcctgccttaacagagaatgagccgccgaccaatcatcctgtgagt
agcgaccaggcagcaaggggggggaggggcagaaaacgcaagaacactgacattagcaag
aagatggacggaattacttggaattccttaggcagatcttcggcgggactaaaacccatc
tatctttatcgaaacattaattcttatcgaaaacacgttgcgaaattagtgaaggagaaa
tctttgcttaacgccaatcatccagagagagtcacagaatcagtcgacgctcccgatatt
attaattccgacgagacacagtgtagatttaatcccaacagttataccatgtttttcatt
gctcacaaggacagattcctttacaagcaaaagtctattaaccgtgcgagaatgtctcat
ccagccgtaacgaagcgtatagattcgaaattccatcattggcatgcatcgtggatatcg
aagaattgcacggacactcagcatcgattgtgtcaggattggctgatgggaagatacgag
aacttgattccccataggacgcgagttgtaacggataacgatcagacacgttccccgtat
cggcaatacaatcgtttcaaagtagaacgtctgcaatctgatctattgacttctgagcaa
tgcgtctaa
DBGET
integrated database retrieval system
