Camponotus floridanus (Florida carpenter ant): 105251812
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Entry
105251812 CDS
T03919
Name
(RefSeq) ATP-dependent helicase brm isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105251812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfo03021
]
105251812
03036 Chromosome and associated proteins [BR:
cfo03036
]
105251812
Transcription machinery [BR:
cfo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105251812
Chromosome and associated proteins [BR:
cfo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
105251812
Chromatin remodeling factors
BAF complex
105251812
PBAF complex
105251812
GBAF(ncBAF) complex
105251812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
ResIII
QLQ
DEAD
HDA2-3
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
105251812
NCBI-ProteinID:
XP_011257140
LinkDB
All DBs
Position
Unknown
AA seq
2078 aa
AA seq
DB search
MASPSPQSSPMPPPQAPSPMGPPQQAPSPSNAQGSPMGPPQHHPHSPTQGYQGGPPMQQG
GPPMSQPPQQPPPQQQNYPPHPQQMPPNMGPQNQGPVGQISSSQQGPGGPMVPGQMGPNG
PQSGSHMMQGGPNQIGSNGPGQMGPGGPGQMGPGGPGQMGPAGPGQMGPGGPGQMGPGGP
GQMGPSHMVQGGGPPSGPHMGQGGPGQMGPGSGPVPGSQMSTGGPQSSQMVSGGPGPGHM
GGPPGHMNASGPPGPGHMTTSGPPGPGHMSGTGPPGHMNASGPPGSGHMNASGPSGPGHM
NTSGPPGSGGHMNTGPPIPSHMNTSGPPVSTHMNTSGPGSHMGPGAPGQMSASGSAGHNI
GPGPNQMGPNQMIPISQAQMGPNGPMGPVGPGSTGQIGPNGPGQMGHNGPSQMGPNGLTQ
MGMGGPPGQMSMNAPGGQMGPGGPGNQMGPATPGNQMGPGAPSNQMGPGGPGGQMGPGSG
PVGQMGPNSLGQMGPGSSPGSVSMTNSGPVSMGPTSGPNGPTSVGVVSGPGGQITSNSGP
GGQMGTAGPGGSGSGGQMGLGNGPGAQMNAGSGPGGQMTTGSGPGGQMGPGSGQMGHGGS
VPGGQMGPGSGPGGQMGPGTSPAGQMGPGGQIPSGGPGQMMQGGPGAQMGPNAPSNQMGP
GGPNSQIGPCGPNNQISHINVSGQMGPNGPTNQSPTTQIGPGNQNQGQVLGSTTPIGAPV
NQMSQTGSGQIGPSGPTGPGQGQENLNALQKAIDSMEEKGLQEDPRYSQLLALRARQGGI
EKQAFSSSQLQQLRAQIMAYRLLARNQPLPQQIVVGVQGGAPPPPGMGQRPIDPSQGPAT
TAGPQIPGPNVIGPAGPTPRPGCQTPQQQQQQPQPGTKTNRVTSVAKPVGLDPLLILQER
ENRVAARISLRMEQLSNLPTNMPEDLRIQAQIELRMLRVLNFQRQLRTEIIACTRKDTTL
ETAVNVKAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKEFH
RNNVAKLARLNKAVLNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRL
AFLLSQTDEYISNLTEMVKQHKIEQKRKQVEEQKRKKQKKKKLQENGENAEDGSANDDAR
VGVIDTATGRTLTGDEAPLMSQLSAFLEAHPGWEPIESESEDDEEDDDDGESEDKSDSKE
KSTGDSEEEKVKKTIHKAKVEDDEYKTEEQTYYSIAHTVHEVVTEQASIMVNGKLKEYQI
KGLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWV
LEFEKWAPSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTYEYVIKDKGVLAKLQWKYMI
IDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTF
EQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCD
MSGLQKVLYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKY
CEHVGTPGSNVITGPDLFRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSW
RGFMYLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDW
NPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKS
TGSERQQFLQSILHQDDADDEEENEVPDDETVNQMIARTEGEFEIFQKLDLERRREEAKL
GANRKSRLLEEAELPDWLVKDDDEVERWTYEEDEDRFLGRGSRQRKEVDYTDSLTEKEWL
KAIDDDGAEYEEEEEDDKKKKKTRKRKKKGEEDDEPMPKKRRGGSSLVDPKMKRAMKKLI
TVVVNYTDSSDGRLLSEPFMKLPSRRELPDYYEIIKKPLTINKLLQKIEEGKYADLDELE
KDFMQLCKNAQIYNEEASLIHEDSIVLQSVFTNARQRLEEEGNNSDGDDKDGEEGSDADS
SVRMKIKLKGRKSEGRGGRRKRVTKKYISDDDDDADDN
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtccttcgccccagtcgtcgcctatgccacctccacaagctcctagtccgatg
ggtcctccgcagcaggcaccctctccatctaatgcgcaaggcagtccaatgggaccgcca
cagcatcatcctcacagcccaacgcagggttatcaaggtggcccaccgatgcaacaagga
gggccacctatgtcgcaacctccacaacaacctcctcctcagcaacagaattatccgcct
catccacagcagatgccacctaatatgggtccgcagaatcaaggtccagtcggacagata
tctagttctcaacagggtcctggaggaccaatggttcccggtcaaatgggcccgaatgga
ccacaaagcggatcgcatatgatgcaagggggtccgaatcaaataggttctaatggacct
ggacagatgggtcctggcggacctggacaaatgggacctggtggacctggtcagatgggt
cctgcaggccctggacagatgggaccaggtggtcctggacagatgggtccaggaggtccc
gggcaaatgggtccatctcacatggtgcaaggcggaggccctcccagcggtcctcacatg
ggacagggtgggccaggacaaatgggtccaggtagtggacctgttccaggctctcagatg
agcaccggaggcccccagagttcgcaaatggtttctggaggacctggacccgggcatatg
ggcggacctccaggtcatatgaacgcaagcggcccaccaggtccaggccatatgactacc
agcggtccacccggaccgggacatatgagcggcacaggacctccaggacatatgaatgcc
agcggaccgcctggatcagggcatatgaacgcgagtggtccctctggaccaggtcatatg
aacactagtggacctcctggatcgggtggtcacatgaataccggtcctccgatcccaagt
cacatgaacacgagcggtccaccagtatccacgcatatgaatacaagcggtccaggaagt
cacatgggcccaggtgctcctggccagatgtccgcaagtggttccgcaggacacaatata
ggtccaggtccaaatcaaatgggtccaaatcagatgatacctatcagtcaagcgcaaatg
ggacctaacggaccaatgggtcccgtaggaccaggatcaacaggacaaattgggccaaat
ggacctggacaaatgggtcataatggaccgtcgcagatgggtccgaacggacttacgcaa
atgggcatgggcggaccacccggacagatgagtatgaatgcaccaggtggacagatggga
ccaggcggaccaggtaatcaaatgggtcccgcaacaccaggcaaccaaatgggaccaggt
gcgccaagtaatcaaatgggacctggcggtcctggaggacaaatgggaccaggaagtggt
ccagtcggtcaaatggggccgaatagtctcggtcagatgggtccgggaagtagtccagga
agcgtgtcaatgacaaatagcggaccggtttccatgggtccaacgagtgggccaaacgga
cctaccagcgtaggtgtagttagtggacccggtggacaaataacttcaaacagcggtcct
ggaggacaaatgggcacagcaggccctggaggaagcggttctggaggacagatgggatta
ggaaacggtcctggtgcgcaaatgaatgccggtagcggaccaggtggccaaatgacaacc
ggaagtggtcctggaggacaaatgggaccaggcagtgggcaaatgggacatggtggcagt
gtgcctggaggtcaaatgggaccaggaagtggacctggtggacagatgggaccagggact
agccctgctggtcaaatggggccaggaggacaaattccatctggcggtccaggacaaatg
atgcaaggaggtccgggtgctcaaatgggtccgaatgctccgagcaatcaaatggggcct
ggcggaccgaatagtcaaataggaccatgcggtccaaataatcaaatcagtcatataaat
gtgagtggacaaatgggtcctaatggtccgaccaatcagtctcctaccactcaaataggt
cccggcaatcaaaatcaaggtcaagttcttggtagcacgacacccataggtgctccagta
aatcagatgagtcaaactggaagtggacaaatcggaccttctgggcctacaggacctgga
caaggacaggaaaatctgaatgcgctccaaaaagcgatcgattctatggaagaaaaagga
ctacaagaagacccacgatattctcaattattagctttaagagctcgtcaaggtggcata
gagaaacaagcctttagttcatcacaattgcagcaattacgagctcaaataatggcatac
agattgctggcaagaaatcagccactacctcaacaaattgtagtaggtgtgcagggtggt
gctcctcctcctccagggatgggtcaacgccctatagatccgtctcaaggccctgctaca
acagctgggccacaaataccaggtccgaatgttattggtcccgcaggtcccactcctaga
cccggttgtcaaacgccacaacaacaacagcagcaacctcagcctggcactaagaccaac
agagtgacgagtgtggcaaaacccgttggactagatcccttgttaatattgcaagaacga
gaaaatagagtagcagcccgtatatcgcttagaatggagcaacttagtaatctaccaaca
aatatgccagaagatcttcgtatacaagctcagattgaactgcgtatgctcagagtactg
aactttcagaggcaattaagaacagagataatagcatgcacacgaaaagacactaccttg
gaaaccgcagtgaatgtaaaagcttataaacgcacaaaacggcaaggattacgcgaagct
agagctactgagaaattagaaaagcaacaaaaattggaagcagaacgtaaacgaagacaa
aaacatcaagaatttcttagttccgtactgcaacatggcaaagatttcaaagaatttcat
cgcaataatgtcgcaaagttggctaggcttaacaaagcagtgctcaactatcatgcaaat
gctgaacgcgaacagaagaaagaacaggaacgcattgagaaggagcgtatgcgtcgtctt
atggcagaagatgaagagggatatagaaaattgatcgatcagaagaaagacaaacgttta
gctttcttgctatctcaaacagacgagtatatcagcaatctcacggaaatggttaaacag
cacaaaatagaacaaaagaggaaacaagttgaggaacaaaagcgtaagaagcaaaagaag
aaaaaattacaagagaacggtgagaatgctgaagacggtagtgccaatgatgatgctcgt
gtcggtgtaatagatacagccactggtcgcacattaacaggcgatgaagcaccattgatg
agtcaattgtcagcattcttggaggctcatcctggatgggagccaattgaatcggaaagt
gaagatgacgaagaagacgacgatgatggtgagagtgaagataagtctgacagcaaggaa
aaatctactggtgattctgaagaagaaaaagtaaaaaagacgatacacaaggcaaaggta
gaagatgacgaatataaaacagaggaacaaacatactatagtattgctcataccgttcat
gaagtggttacggaacaagcaagtattatggtgaatggaaaactaaaagaatatcaaatc
aagggattagaatggttagtttcgctgtttaacaacaatttgaatggcattttggcagac
gagatgggtctcggtaaaactattcagaccattgctctagtaacgtatcttatggaaaag
aaaaaagtcaacggtccattcctcatcattgttccattatcgacattatcaaattgggtt
cttgaatttgaaaaatgggcaccgagtgtcgtcgtagtatcatataaaggttctccggct
ggcagaagagctatacaatctcagatgcgagctacaaaatttaacgttctattaacaact
tatgaatatgttataaaagataagggtgtattagctaaattacaatggaaatatatgatt
atcgacgaaggacatagaatgaagaatcatcattgtaagcttacccaagttctaaataca
cattacttggcccctcatcgattattgttaaccggtacaccattgcaaaacaaattgcca
gaactgtgggctcttttgaatttcttgttgccttcgatcttcaaatcctgcagtacgttc
gaacagtggttcaatgctcctttcgcgactacgggcgaaaaggtggaactcaatgaagaa
gaaactattttgattattcgtcgtctacacaaagttttgcgacccttcttgctgagacga
ttgaagaaagaggtagagtcgcagttacccgataaagtggagtacattattaaatgcgac
atgtctggcctacaaaaagttctttacaaacacatgcagagtaaaggtgtattgttaact
gacggatcggaaaagggaaaacaaggaaagggaggagccaaggcccttatgaatacaatc
gtacagttgaggaaattatgcaatcatccatttatgtttcaagctatagaagagaaatat
tgcgaacatgtaggcacaccaggttctaatgttattactggtccggacttatttcgtgcg
tctggaaagtttgaacttctcgatcgaattcttcccaagttgaaagctacaaatcacaga
gtattattgttttgtcaaatgactcaattaatgacaattatggaagattatctgagttgg
cgtggatttatgtatctgcgattggacggcacaacaaaagcagaggacagaggagatctg
ttaaagaaattcaatgatcccggatcggaatatttccttttcctattatccacacgcgca
ggtggtctcggtttgaatcttcaagctgctgatacagttattatctttgattctgattgg
aatcctcatcaggatttgcaagctcaagacagagcacatagaattggacagaagaatgaa
gtacgcgtacttcgattaatgaccgtcaattctgtcgaagagcgaatattagcagcagcc
agatataagttaaacatggacgaaaaagttattcaagccggtatgttcgatcagaagtct
accggctcggagcgacagcagtttcttcagagtattttacatcaagatgacgctgatgat
gaagaagaaaacgaagtgcccgatgatgaaacagtaaatcaaatgatcgctaggacagaa
ggcgaattcgagatattccaaaaactagatctggaaagacgacgcgaggaggccaaattg
ggtgcaaatcgcaaatcacggttgctggaagaagctgagctgcctgattggctagtaaaa
gacgacgatgaggtggaaagatggacctatgaagaggatgaagacagattcctcggaaga
ggttcgagacaacgtaaagaagttgattatacagatagtttaactgagaaagaatggttg
aaggcgattgatgatgatggcgccgaatacgaagaagaagaggaagacgacaagaagaag
aaaaagacacgaaaacgaaagaaaaagggtgaagaggacgacgaacctatgccaaaaaaa
cgaagaggaggcagttctttagtggatcctaaaatgaaacgagctatgaagaaattaata
acagtagtcgttaattatacggatagcagtgacggtcgattattgagcgaaccttttatg
aaattaccctctcgaagagaattaccagattattacgaaatcattaagaaacctttgact
attaataaactattacagaaaattgaggaaggcaaatatgctgatttagacgagcttgag
aaggatttcatgcaactttgtaagaatgctcaaatttataatgaagaagcatccttaatt
catgaagattcgatagtattgcaatccgtttttacaaatgcgcgtcagcgtcttgaagag
gagggtaataattccgacggagatgataaggatggtgaagaaggttccgatgcagattct
agtgtaagaatgaaaattaaactgaagggaagaaaaagcgaaggaagaggtggtcgtaga
aagagagttactaaaaaatatatatccgatgatgatgatgacgcagatgataattaa
DBGET
integrated database retrieval system
