Camponotus floridanus (Florida carpenter ant): 105252018
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Entry
105252018 CDS
T03919
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105252018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfo03021
]
105252018
Enzymes [BR:
cfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105252018
Transcription machinery [BR:
cfo03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105252018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
zf_C2H2_10
Motif
Other DBs
NCBI-GeneID:
105252018
NCBI-ProteinID:
XP_011257489
UniProt:
E2AG26
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MMGKYKQRLTPKHQDSHHLLFSMFTANDIRNLSVTKIRTSLSFNILGHPLKGGLYDPSLG
TTKNFELCSTCGYNSFKCPGHFGHIELPVPVVNPLFHRELATLFKLSCLNCFTFQIPPDI
KTLLAAKLKLLYQGQLADLEILDQEITYVKSNEKDKEKQTQYICDIIDTYMQNFFNRTRL
SQSMIESHEHKSNMKNINTQWHIYVKNVLKEYVRNKVGKCRNCNNVLPKISTLQNKIMIR
NKGGVSKEILSHEVIHKLHTVMIMPNQSKEYLRQLWNNEKDFFQIIIPCLELVDIEYPTD
IFFFEVIPVLPPIVRPVNFINGQMIEHPQTYIYKNIIQDCLILRNIIQTIQDGSIDHLPQ
ASRLVFEQIRGNTTVEKLHNAWQTLQSNIDHLMDRDINRTPESINGLGLKQILEKKEGII
RMHMMGKRVNFAARSVITPDPDLNIDEIGIPEAFARKLTYPTTVTPWNVVELRRLVLNGP
DVHPGAVIIENEDGSVQAINSNDSMQREAIAKRLLTTNDKTNESFTGIKIVHRHLQNGDV
LLLNRQPTLHKPSIMAHKARVLKGEKTLHLHYANCKAYNADFDGDEMNAHFPQNELARSE
GYNIANVCNQYLVPKDGTPLSGLIQDYIIAGVQLTTRGQFFSQTHYTQLVYTALSMVQGD
VILLPPTIIKPKPLWSGKQVLSTVIINIIPSDKTRINLISNAKINVKEWQVETPRRWKCG
VEFKNPIIMSEAEVVIRHGELLCGVLDKMHYGATSYGLIHCIYELYGEMYASKILSAFAK
LFQTFLRYNGFTLGVEDILITHKIDKKRKELILDCRKIGEDVQKSIIKVSNEVSMDEFKD
KVEEFYWHNSKFRAQVDHKYKSVLDVYTNDINRTCLQLGLFKKFPKNNLQLMVQSGAKGS
MVNTMQISCLLGQSELEGKRPPLMISGKSLSSFSAYDPTPRAGGFIDSRFMTGIKSQECF
FHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEGLVIGYDATVRDYDGSLIQFYYGEDGLD
IPGSRFLRKEQMAFLADNKDAIIDTKLLEYLKTDNKKIRKMIKKIKKWEDKNGSSLKKKR
ISEFTRFSIENQNNLKEKRSIDKSNGRSKAALSLMRKWIRTKEEVKETFRAQCAKCPDPV
TSKYRQDIEFGVLPERIEGLIDEYVFHSPKIKKSILRDLLSIKIMKSICPPGEPVGLLAA
QSIGEPSTQMTLNTFHFSGRGDMNVTLGIPRLREILMIASKNIKTPSMEIPFQNNLQNLE
KQAKKLRLKLTKCVLRDVLKDITVSRTIEKSPYRKLVYTIMIEYLPYKSYKNEFSIHRQD
VIKRTEKFFFKNIFKEIEKLTKASKVLLHYEGEKRQASNDDALDQFDPDDIMSENTGRRM
QMDLGEMHESSDEEEIAEDADATMSRSLSRHQENQEYEDSEEEVEDITNYKEEEADNNNI
NKNLENTEDNEEDDYTKEKLDNRKNDKYNRKKCVLDSYLYATDYDYDESKLSWCKFTFWL
PLKMIKLDLPTIIKNAADKTVLCEIPHIKKAFTFQNSENETILKTDGLNIVEMFKYDKIL
NLNRLYSNDIYNISLTYGIEAANKVIVREVRDIFKMYGITVDCRHLSLIADYMTFDGTFQ
PLSRKGMENSASPLQQISFESSLAFLKSATLQGKKDDILSPSSRLMLGQPCKSGTGAFSV
LPSLYM
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgatggggaaatataagcaacgtctaacaccaaaacatcaagactctcatcatttatta
ttctcaatgttcacagcaaatgacataaggaatttaagtgtaacaaaaataagaacatct
ttatcttttaatatacttggacatccactaaaaggtggattatatgatccatctttaggc
acaacaaagaattttgaactatgcagcacatgtggatataatagcttcaaatgtccaggt
cactttggacacatagaattgccggtacctgttgtcaatccattatttcatagagaatta
gccacattgttcaaattgtcgtgcttaaattgttttacttttcaaataccaccagatatc
aagacattacttgctgcaaaattaaagttactttatcaagggcaacttgctgatcttgaa
attttagatcaagagataacatatgtcaaatctaatgaaaaagataaagaaaaacaaact
caatatatttgtgatataattgatacttatatgcaaaacttttttaacagaaccagactc
agtcagtctatgattgaaagtcatgagcataaaagcaacatgaagaatatcaatacacaa
tggcatatctatgttaaaaatgtacttaaagaatatgtcagaaataaagttggaaaatgt
aggaattgtaataatgttttaccaaaaatttcaacgttacaaaataaaataatgataaga
aataaaggaggagtctccaaggaaatattgtcacatgaagtgattcataaattacataca
gtgatgattatgccaaatcagtctaaggaatatctacgacaattatggaataatgaaaag
gatttttttcagataattataccctgcttagaattagtggatattgaatatccaactgat
atattttttttcgaagtaatacccgtgctaccgcccattgtgcgaccagtgaactttatt
aatggtcaaatgatcgaacatcctcaaacttacatctataagaacatcatacaagattgt
ttgatcttaagaaatattatacaaacgattcaagatggaagtattgatcatttacctcaa
gcgagtcgacttgtctttgaacaaataagaggaaatacaacggtcgaaaagctacacaac
gcctggcaaaccttgcaaagcaatattgatcatctgatggatcgcgacataaataggact
ccagaatctatcaatggtttaggcttgaaacaaattcttgagaagaaagaaggtattatt
agaatgcacatgatgggtaaaagagtgaattttgctgcacgttcggtcatcactccagat
cctgacttaaatatcgatgaaatcggcattcccgaagctttcgctcgaaaattaacttat
cctacaactgtaacaccgtggaacgtcgttgaattgcgacgattagttttaaatggaccc
gatgttcatcctggagcggttataatagaaaatgaagatggatcggtacaggcgattaac
agtaacgattctatgcaaagagaagctattgctaagcgtcttttgacaacaaatgacaaa
accaacgaatccttcactggcatcaaaatagtacatcgacatcttcaaaatggcgatgtg
ttgttattaaatagacaaccaacgttacataaaccgagtataatggctcataaagcacgt
gttctgaaaggagaaaagacattgcatcttcattatgcaaactgtaaggcgtataatgcg
gattttgatggcgatgagatgaacgctcattttccgcaaaacgaactagctagaagtgag
ggttataatatagctaatgtgtgcaatcaatatctcgtaccaaaagacggaactccgtta
agtggtcttatacaagattacataatagccggagtacaattaacaactaggggtcaattt
ttctcacaaacgcattatacacaattagtttatactgcactctcgatggtacaaggagat
gtaattctcttaccaccaactattatcaaaccaaagcctctatggtcaggtaaacaagtt
ctttcaactgttataattaatattattccttcggataagacacgaattaatctaatttct
aatgcaaagattaatgtaaaagaatggcaagtggaaacaccacgacgttggaaatgtgga
gtagaatttaaaaatccaataattatgtcagaagctgaagttgtaattcgacatggagaa
ttactatgtggagtgcttgataaaatgcactatggtgcgacttcttatggtcttattcat
tgtatttatgagctatatggggaaatgtatgcaagtaaaatattaagcgcatttgcaaaa
ttgttccaaacctttttacgatacaatggatttactctgggtgttgaagatattctaata
actcataaaattgacaaaaaacgtaaagaattaattcttgattgtcgaaaaatcggagaa
gatgtacaaaaatctatcataaaagtatctaatgaagtatctatggatgaatttaaagac
aaggtggaagaattttattggcataattcgaaatttcgtgcacaagtcgaccataaatat
aagagtgtattagacgtttacactaatgatattaatagaacgtgtctacagctaggactt
tttaagaaatttcccaagaataatttacagcttatggtacaatctggcgcaaaaggatcc
atggttaatactatgcaaatatcgtgtttgcttggtcaaagtgaattggaaggtaaaagg
ccaccattaatgatcagtggaaaaagtttatcaagtttctcagcgtatgatccgacacct
agagctggcggttttatcgatagtagatttatgactggaattaagtctcaggaatgtttt
ttccattgcatggcaggacgtgaaggtcttgttgatactgcagtcaaaactagtagatcc
ggatatttacaaagatgccttgtgaagcatctggaaggattagttatcggttatgatgcg
acagttagagattatgatggtagtttaattcaattttattatggagaggatggcctcgat
ataccgggttcacgattcttaagaaaagaacaaatggcatttttagccgataataaagat
gctattatagatacaaaattattggaatatctaaaaacagataacaaaaagattagaaaa
atgataaaaaagattaaaaaatgggaagataaaaatggttcttctttgaaaaagaagaga
attagtgaatttacgagattttctattgagaatcagaataacttaaaagaaaaaagaagc
attgataagtctaatggaagaagtaaagctgcattatctcttatgcgaaaatggataaga
acgaaggaagaagtgaaagagacatttcgcgcacaatgtgctaaatgtcccgatccagta
acatcaaaatatagacaagatattgaatttggtgtattaccagaacgaatagaaggttta
atagacgaatatgtttttcattctccaaaaattaaaaaatccatcctaagagatttgtta
tccatcaaaattatgaaaagcatttgtccacctggtgaaccagttggtttgttagcagca
caatctataggcgaaccatccactcaaatgaccttaaatacatttcatttttctggacgt
ggtgacatgaacgtgactctaggtattcctagattgcgtgaaattttaatgatagcatca
aagaatataaagactccaagtatggaaatacctttccagaacaatctgcaaaatcttgaa
aagcaagcaaagaaactaagattaaaattaacaaaatgtgtcctgcgtgatgtattgaaa
gatattacagtaagtagaacaatagaaaaaagtccatatagaaaattagtgtacactata
atgatcgaatatcttccttacaaatcttataaaaatgagttttccattcatcgacaagat
gtaattaagcgtactgagaaattttttttcaagaatatatttaaagaaatcgaaaaactt
actaaagcaagcaaagttttattgcattacgaaggagaaaaaagacaggcaagcaatgac
gatgcactagatcaatttgatcctgatgacataatgtcggaaaatactggacgaagaatg
cagatggatttaggagagatgcatgaatcatccgatgaggaagaaattgcagaggatgct
gatgcgacgatgagtagatccctatcgcgtcatcaagaaaatcaagaatatgaagattca
gaagaagaagtggaagatatcacaaattataaagaggaagaagcagataataataatata
aataaaaacttggaaaatacagaagataatgaagaggatgactatactaaggagaaatta
gataacagaaaaaatgacaaatataacagaaaaaaatgtgtcctagattcatatttgtat
gctactgattatgattatgacgaaagtaaattatcatggtgtaaattcacattttggtta
ccacttaaaatgattaaattagatttgccaacaataattaaaaatgctgcagacaaaact
gttttatgcgaaataccacatatcaagaaagcttttacttttcaaaatagtgaaaatgaa
acaattctcaaaacagatggtttaaatatagtagagatgttcaaatatgataaaatactt
aatttaaataggttatattctaatgatatctataatatttctttaacatacggaattgaa
gctgcaaataaagttattgtaagggaagtgagggatatctttaagatgtatggtattact
gtagactgtagacatctatccttaatcgctgattatatgacatttgatggaacattccaa
ccacttagtcggaaaggaatggaaaattctgcctcaccattacaacaaataagttttgaa
agctcgttagcttttttgaaaagtgcaacattgcaaggaaaaaaggacgatatattatca
ccttcaagtagactgatgttaggacaaccatgcaaatctggaactggagcattctctgta
ttaccatcattatacatgtaa
DBGET
integrated database retrieval system
