Camponotus floridanus (Florida carpenter ant): 105252039
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Entry
105252039 CDS
T03919
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03013
Nucleocytoplasmic transport
cfo03015
mRNA surveillance pathway
cfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105252039
09122 Translation
03013 Nucleocytoplasmic transport
105252039
03015 mRNA surveillance pathway
105252039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105252039
03041 Spliceosome [BR:
cfo03041
]
105252039
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105252039
Spliceosome [BR:
cfo03041
]
Complex C
Other components
EJC/TREX
105252039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
105252039
NCBI-ProteinID:
XP_011257514
UniProt:
E1ZWY7
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MRRKSERNKAKGSPEKKIEKPTRKSMRRRKKSPSTSPSKQDNFVEDAPESTAPLKEIEKE
TSVQTRLQSKELEQTPHGHEEKVSSTEKDVKADSPENEEDNGGSVWKVARADASPGEIQK
LKLCRQRNTSEASSDTASSSRKSVKSSSKWQESGEGVAEEADSADEQLVSCTRMLSSTEQ
PNDPSSSYPGQDSNEEVSDSKEILPETTSVNLLSDDKPNIDQHGESNEANCAAQIIDSES
GSTKPGSTTTALTPSADSDYLCEKPAAAVTVQEEKSVEDINEKSTEIFSHETNVENVHKD
TSSEDEEDDKAKTHRPVDSSSDSNDESRPKRRTSSDRTSPRAIRRKHRNKYGDSSNSDTP
DSEDETVDSKVSKPYVEEEEEEEDEKPTTEYSQENDKERSVSPERTNSHSNNVEKMEVEQ
CETVQDKSEENTTEKSEQTAPVGTQTIAHKPVKVNLKRSFSTRILSEKNEMKRDDTDTNV
DNESNSQNKENGNEQEPKCVPRKRRWGTALSTDTAPSFSISTDSLKALVPGAKPLSINEV
RLSKDDDEDKDRHRSNDKRHNSNDSTNDNKITDENLQKNGTAKKGNGKTDNHIATRRKIS
IVKEMPHIKSPSPPTSKPTNILLIKNLVRPFTLNQIKELLSRTGTIVENGFWMDRIKSKC
IVEYSNEDQAFETRQALHGISWPMSNPKKLHVEYATKEDMEAARESSKEQPVARKAEPLS
SDPWQQDWSRDEKINTTKVTVVREWDLGKEDGQQHIREKEREKKEHDKKRRARSRSPALD
AHLSAPARKFKKKEDDPPPAKLLDDLFRKTKATPCIYWLPLTNEQIVVKEEMRRQHMAEH
ARRLEEMRRADRNRDGRRRRSPRK
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcaagagtgaaagaaataaagcaaagggatctccagagaagaaaattgagaaa
ccaacgaggaagtcaatgcgtagacgtaagaaatcgccttccacttcgccttctaaacaa
gataattttgtcgaagatgcgcctgaaagcaccgctccactcaaagaaattgagaaggaa
acaagcgtacaaacgcgcttacaaagtaaagaattggaacagacgccacatgggcacgaa
gaaaaagtgtcgtctactgagaaagacgtgaaggcagactcaccagaaaatgaggaggat
aatggcggctctgtgtggaaagtagcgagggcggatgcatcacctggcgagatacagaaa
ttgaaactatgtaggcagcgcaacacatcagaagcatcatcagatacagcatcttctagt
aggaaaagtgttaagtcaagtagcaagtggcaagaaagtggtgagggcgttgcagaggag
gctgactcggcggatgagcaactggtttcttgtacaagaatgcttagtagcactgaacag
ccgaacgatccctcctcttcatacccaggtcaggactccaacgaagaggtaagtgatagc
aaggagatcctgcctgaaaccacttcagtcaacttgttgtctgacgataaaccaaacata
gatcagcatggtgaatcaaatgaggcaaattgcgctgcccaaatcattgatagcgaatct
ggtagcacgaaaccgggtagcacgacaaccgcgctgactcctagtgcagacagcgattat
ctttgcgagaagccagctgctgctgtcaccgttcaggaagagaagtctgtggaagatatc
aacgaaaaatcaacagaaatattcagtcatgagactaatgtggaaaatgtccataaagat
actagtagtgaggatgaggaagatgataaagcgaaaactcatcgtccagtagactcatcg
tctgattctaacgatgagtcgcgtcctaaaagaagaacaagtagcgaccgaacatcgcca
cgtgcgattcgcagaaaacatcgaaacaaatatggagattcatctaattctgatacacct
gattccgaagatgaaactgttgatagtaaagtctccaaaccttatgtcgaggaggaggaa
gaggaagaggatgagaaaccaactacagagtattcacaagaaaatgataaggaacgatcg
gtctcgccggaaagaacaaactctcactcaaacaatgtagagaaaatggaggttgagcag
tgtgaaactgtgcaggataaatcagaggaaaatacaactgaaaaatcggaacaaactgca
ccagtcggtactcagacgatcgctcataagccagtgaaagtcaacttgaagagatcattt
tcaacaaggatattatctgaaaagaacgaaatgaaaagagacgacactgatacaaacgtc
gacaatgaatccaatagtcaaaataaggaaaacggcaacgaacaagaacctaaatgtgtg
ccaaggaaacggcgatggggaaccgcgctttctacagatactgcaccttcattctctatc
tcgacagattcactcaaagcattggtaccgggtgcaaaaccattatctatcaatgaagtt
cgtctctcgaaagatgacgacgaggataaagatcgtcatagaagtaatgacaaacggcac
aattctaatgacagtacaaatgataataaaataacagacgaaaatttacagaagaatggc
actgctaaaaaaggcaatggaaaaacagataatcacattgcgacaaggcggaagatatcg
atcgtgaaagaaatgccacatataaaatcaccgagtccacctacgtctaaacctactaat
attcttctgattaagaatctagttcgcccttttacattaaatcagattaaggaacttctt
tcgcgtactggcactattgtggagaacggattttggatggatcggattaagtccaaatgc
attgttgagtattccaatgaggatcaggcttttgagacaagacaggcacttcacggaatt
tcttggcctatgtcgaatccaaagaagctccatgtggaatatgccacaaaggaggacatg
gaggctgcacgggaatcatccaaggaacaaccagtcgctcgcaaagccgagccgctttcg
tcggatccatggcaacaggattggagtcgcgacgaaaagatcaatacaactaaagtgact
gtagtgagagaatgggatttaggtaaagaggatggccaacagcacatcagggagaaggaa
cgtgagaaaaaggaacacgacaaaaagcgacgagcgagaagtcggagccctgcattggat
gcgcatttatcggcaccagctcgtaaattcaagaagaaggaggatgatccgccgccagcc
aagctcctggatgatctcttcagaaagacgaaggcgacaccttgcatatattggctgcca
cttacgaatgagcaaatagtcgtcaaggaagaaatgcgacggcaacacatggccgaacac
gcgcgcagattagaagagatgagacgtgctgacagaaatagagatggccggcgtcgacgt
agtccgagaaaatag
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