Camponotus floridanus (Florida carpenter ant): 105252450
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Entry
105252450 CDS
T03919
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105252450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105252450
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105252450
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105252450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
105252450
NCBI-ProteinID:
XP_011258109
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
KDEVTSWLANSIDALNLQMDTFESEIESLQAGKKKRIDKDKQDRVDELKTKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQDPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSCTSPIPSPSLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNTQASIPTTGSTATIKSNILSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHSSSQTIHPTSNKTSTHNNENSLLSSSSMSSITSIVPQTVTQQHNSNSAPVQTTHV
LHSQQSQNHNSETEMTTPIPPSSSPQSSVSSRSSPMPANSCSPAPSTANGLIPKLPDGNM
SSLKSIAQQVIVRAGLEIPPSEPNRNIFDSTKTNNNSGNNATSEAHIPPLLGVAPLGPVP
LQREHQLQFQMMEAAYCHMPHPSDSERLRSYLPRNTCTTPPYYQQVQLPHSDTVEFFQRL
STETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIY
FDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaagaaagttgcaaggtgaaatagatcggtgccttaaaaaagtaacagaa
ggtgtagaaacctttgaagatatttggcaaaaagttcataatgccaccaacagcaatcag
aaagaaaagtacgaggctgatctcaaaaaggaaattaagaaacttcaaaggttacgcgat
caaattaagagctggatcgcatcaggtgaaataaaagataagagtacattacttgactac
aggaagttgatcgaaactcaaatggaaagatttaaagttgtggaaagagagacaaaaaca
aaggcttactctaaagaaggtttgggtgcagctcaaaaattagacccagctcagaaagag
aaagacgaggttactagttggctcgccaattctatagacgctctcaatctgcagatggat
acatttgaatcggaaatagaatcgttacaggcgggaaagaagaagagaatagacaaggac
aagcaagatagggtagatgaattgaagacgaagctcgataagcatcgctatcatatccgt
aaattggaaacgttattacgtatgcttgacaatatgtccgtcgaagtcaatacaattaag
aggataaaggacgatgttgagtattatatcgaatcgtcgcaagatcctgattttgaagaa
aacgaatatatttatgatgatattatcggcctcgatgaagtcgaattgtccggggttggt
ataccctcgtcagcaacgacggatagtaacaatagcaacgaaaccggggggacgccgact
tcaactaattcctgtacttcgcctataccgtcaccatcattgagttcaactatgcataat
cattcgagcgacagttctacagataacgataagaaaacaaagcctgtgaaaccgacagca
gtcagaccgctactgaatacacaagcgagcattccaaccacgggaagcactgccaccata
aaatcgaacatattatcaagcagcactccgagcaaaaccattcccatgacgcctagccac
agctcgcctagttctacgagtaatcacattgccaccactaacgctggcaattttgccact
gtagctgcttcgcacagcagttcgcaaaccatccatcctacctctaataaaacatccacc
cacaacaacgagaatagcctcttgtcgtcatcgtctatgtccagcattacgtcgattgtg
ccgcaaacggttacgcaacagcataatagtaattcggcgccagtacaaacgacgcatgta
ctacacagtcagcagagtcagaatcacaatagtgaaacggaaatgaccacgccaataccg
ccgtcgtcatcgccacaatcatcggtcagcagtagatcctcgccgatgcctgcaaattcc
tgctcgccagcaccgtccactgccaatggtctcatccctaagcttcctgatgggaatatg
tcctctttaaaatccattgcccaacaagtaattgtccgagcaggtctcgagataccgcct
tccgagccgaatagaaacatctttgacagtactaagacaaataacaacagcggtaacaat
gctacgtcggaagcacacattcctccgctgcttggggtcgcgcctctggggcctgtacca
ttacagagagaacatcagttgcaattccaaatgatggaggccgcgtactgtcatatgcca
catccgtctgactcggaacgactacgttcgtatttgccgagaaatacgtgcactacacct
ccctattatcagcaggttcagcttcctcattcggataccgtggagttcttccaacgtctt
tctacagaaacattattcttcatattttattatatggaggggtctaaaggacaatatttg
gcggcgaaagctctaaagaagcaaagctggaggtttcacactaagtatatgatgtggttt
caaaggcacgaagaacctaaagttattaatgaggaatatgaacagggaacatacatttat
tttgactatgaaaaatggggacaaaggaaaaaagaaggatttactttcgagtataagtac
ttagaggacagagacttgaattaa
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