Camponotus floridanus (Florida carpenter ant): 105252504
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Entry
105252504 CDS
T03919
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03030
DNA replication
cfo03410
Base excision repair
cfo03420
Nucleotide excision repair
cfo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105252504
03410 Base excision repair
105252504
03420 Nucleotide excision repair
105252504
03430 Mismatch repair
105252504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfo03032
]
105252504
03036 Chromosome and associated proteins [BR:
cfo03036
]
105252504
03400 DNA repair and recombination proteins [BR:
cfo03400
]
105252504
DNA replication proteins [BR:
cfo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105252504
DNA Replication Termination Factors
ELG1-RFC complex
105252504
Chromosome and associated proteins [BR:
cfo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105252504
DNA repair and recombination proteins [BR:
cfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105252504
Check point factors
HRAD17(Rad24)-RFC complex
105252504
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_16
AAA_22
AAA_11
bpMoxR
AAA_14
RuvB_N
DUF815
ResIII
AAA_30
AAA_assoc_2
AAA_7
Mg_chelatase
AAA_19
AAA_5
AAA_2
AAA_24
nSTAND3
TniB
DNAX_ATPase_lid
SLFN-g3_helicase
Bac_DnaA
RNA_helicase
AAA_3
NB-ARC
TPR_PRD1_C
MCM
AAA_28
AAA_18
AAA_29
Motif
Other DBs
NCBI-GeneID:
105252504
NCBI-ProteinID:
XP_011258199
UniProt:
E2AHM5
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MHAFLKTGKLGAPTDVKKPSTSRAKDDKKDLTPWVEKYRPKNVDDIVEQTEVVNVIRQAM
KHGDFPNMLFYGPPGTGKTSIIHAAARQMFGSMYKDRILELNASDDRGIQVVREKIKSFA
LRKANPIGPDGKKCPPFKIIILDEADSMTGAAQTALRRIMEKEAHSTRFCLVCNYLSRII
KPIASRCTKFRFKPLSDEKSISRLEYICNEENLKADRSVLEKIVEASGGDLRQAVMCLQS
ITRLKGKNYEITVDDALDVIGLIPDEKINALWEACKKGNYSNVETLLENLLLEGYPGSQV
IEQLNEKVIFSDELSDKQKVIIGDMLGECDYKLTEGSDEYLQLLSIFSTILIAWKSS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcacgctttcttgaagactggtaaattgggcgccccaacagatgtgaagaaaccatcg
acttctcgcgccaaggatgacaaaaaagacttgacaccatgggtggaaaaataccgacca
aaaaatgtcgatgacattgtagagcagacagaggtggtgaatgtgataaggcaagccatg
aaacatggagattttcctaatatgttgttttatgggccaccgggtactggcaaaaccagc
attatccatgcagctgcaaggcagatgtttggtagtatgtataaggataggatactggaa
ctgaatgcctctgatgatcgaggtatccaggttgtgagagagaagatcaaatcctttgca
ttacgcaaggctaatcctattggaccagatgggaagaaatgtccaccattcaagatcatc
atattggacgaagcggacagtatgactggcgccgcgcaaacagcacttcgtcgaattatg
gaaaaagaggcacatagcacgcgcttttgcctagtatgcaattacctatcgcgaattatc
aagccgatagcgtcgcgctgcaccaagttccgattcaagccactgagcgatgagaagagt
atcagcagactcgaatatatatgcaatgaggagaatctaaaggctgatagaagcgttcta
gagaaaatcgttgaagcgtccggtggcgatttgagacaggccgtcatgtgtctgcaatca
atcacacgattaaagggcaagaattatgagatcaccgtggatgatgctcttgatgtgatt
ggactaattcctgatgaaaaaattaatgcgctgtgggaggcctgtaaaaaaggaaactat
agtaatgtcgagacattacttgaaaatttgctgttggaaggatatccaggctcacaggta
atcgaacaattaaatgagaaagtaattttctctgatgaactgagtgacaaacagaaagtg
ataattggcgatatgctcggggaatgcgattataaattaacagaaggaagtgacgaatat
ctgcagcttttaagtatattttctaccatcttaatagcgtggaaatcatcataa
DBGET
integrated database retrieval system
