Camponotus floridanus (Florida carpenter ant): 105252880
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Entry
105252880 CDS
T03919
Name
(RefSeq) vacuolar protein sorting-associated protein 13 isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfo04131
]
105252880
Membrane trafficking [BR:
cfo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
105252880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
105252880
NCBI-ProteinID:
XP_011258849
LinkDB
All DBs
Position
Unknown
AA seq
3287 aa
AA seq
DB search
MVFESIIAELLNKVIGEYIENLDYTQLKVSLWGGDLVLNDLLIKESALDVLDLPVRLEYG
RLGKLILKIPFKDMWNGQIDAIVEELFILVVPTSQVAYNEEKESKAQLEAKRAELDRVEK
RKQLEDIKSQEKLDDSMVEKLVARMIKNIHVEIKRIHVRYEDHVTFKEHPFSVGFTLNTF
VLESCTDSWETTGNLKDMYAIPQIFKLCSLDGLAVYLNTSVEQYSKSPQSSYSNLFCQGI
ATTDYIPTGYQYLLGPINVKSKLRLNPKPESDNSDYTIPKVWLDLEMQKLRIGLTKRQYQ
TLIRLGEGLDQARKAAPYRKYRPNLTSYRGHYKEWWHFAYTCVLEETVRRYRRNWNWIHM
KQHRDTCRDYAQAYQTKLTTKKLAKEIAEQLTHCEMKLDIFNLVIIRQQIEMEVERLAER
EKSLKAKRGWFGFLWNSSQAEETKELNSAAAIMRRFEEAMTPQEKEKLYRAIDYQENSAP
AHYPETYEMIDTCFYLHGLQISLLDTDKEHSCILDLQLHGVRAGFKSRPSANAILVTASI
SDMKLLGVTQDGHIPSLFNPEHGSSDSALLSVSYEKNPIDKLCGDRVIVKSRSADIIYDA
QTIIELVNMFKVQDSSTLNQLQTAAAEQLEGLKEMSALGLEYAIQKHSILDIQVDMQASQ
LIIPHGGFYGDSKSLIVVNLGSLKMHSLENGKSDMAGASVKQLVSMGKSEEEVLLHLREH
SYDKFVLEIVNFQVLVSLPNEEWRSALASTESSLTLLHPTTLEIQFHKCLVMDDPLLPKL
RLLGRLPSVTVNITDVRLLQALSIAQSIPLPEEEKTAELHRTSLSKSISQLSLKELGTTI
STIADKRKQQEGTMSVPIKQTTDLEMKFEMKEFTLSISRQRDDNVESEFVRFQVLQVEAE
MLQRTYDQEVQLRLGGVQLRQLHEDQEIFIVNTPMSTGRDEYLIVVRYINVNKRSPEFIT
RHGSVVKLLVLEFTSLDMLLHQEALIELLRFSTYIQDRMNSLEGVQKKEVEHLRPTQLAS
IQEETSGFFKEQMQRQKSRSTGRRRRQTVECIDLKVSAKVGSINLKISSVIRDISALYIE
GLSASFLSKSSYSQVNADLASISIKNLNPASVYKDIVAVEGTESLQIQAVMYNIESWEVD
KNNMSVKVTMGCHRIVFLNAFVTSVMNFLNNFQTAQKAIKDASAAAAEAARTNIKDVQES
ASRIQLCIKIKAPVVYVPMNSKSEYSLMLDMGNLMVCNVFKKLEATNEETNECPIVDEMK
IELQNLKLLRVRLNTEKFINENEVLILEPVTFTLLMKRNLSTAWFTAIPDIDMSGRLNKI
NLLLSKEDYATILKVLEQNLGETFEDSKLVQPVPSTVKSEYSGELQIQPAYKYEVSTSQE
PPSTDSQERHAHTFVKFEFIMDSLVINLFTGGSKLLQSQTSPLHLPENGLARFSLTHFAV
KGRVFADGLLATSILLMNCTLDDTRQSREGSLVRIMERISMPSGGASEDHLDKEHAKYNT
RSMLDVTVRQSPNDTFADVRVFSFSIIVSLDYLMKIKDFFDVDTAGKTIATTSLQSSSKG
ESVVSSKKKHPTQQPVAPTPKMLTVNLHVEKPDIILLEDMDDINSNCIILNTELLLKMRI
MGEHQVITGSIKDFSLLTGIYNPTKRADWIYQVLKPCSISVAGSTPEGKGLHLDICCTDI
HISVSPGVIEILNKVVHTMTKKEEEDKEVIKAEPNYEGLWIVTPFEENDYWFLKTEIALE
ALEEFTYPDDEITTAYKSELAIISAPTILFTLEAGVGNKTLPMLLLHVGFQSNINDWSTK
TMGVDCTMSVIMAYYNSRLALWEPLIEPIEGSDNGKRVSTPWELKTKVQFNDILLDSRGA
SAVSPTSDSEPEELPNQSTKMSIDITSSDNLEITVTKTCLDVLKQLGQSFSSAMEASGKG
PTKKVAPYMLKNETGLPMILDLEHSLFKIFDDGSRIQNDSNSYMEVILETGASIELAPKT
SKLDTHLLKQLKAETVKDREDSKFTVSFKGIQGKLAIPVLKADKRFFSLKYRKEGSEEWG
IVSDVIVEEGSTIVTLRSILQIHNHFAQPIAVYYMTKRGNEVECVGTVAPDEKLNLPLDA
VYTPTNIYWLFFSVEGYMVSVEPFIWKDLQKTVSMTKLLKCESRSKQDVTEPFYIQAVGE
IEQVYFENTTRHTMASTIYNVHLYPSIYLKNFLPIDIIISLPGIVQENLLEASASLQLPT
IDPVKSSIIIKLPNYLEKDWSCKGEIVANPPEFAVWSFESFDSAQKVTLDLGMHTSYKYG
SIVMALYCPFWMLNKTGLMLSYRKSSKGGKEHSSPIKKFVSTMKPHQQRRRRKTRATTDD
YLNVLYHPEHFKGPILFSFRSKAFFGKKKAMIRVEDGEWSEKFSIDVAGSEGVVACKYNG
MTYQIGVHNQLTYNSLTKQITFTPYYILINNADFLIECQEGDRPADPMIKVPPGECAALW
PRIEHDNKTLRAKVAGQPEKTAAFIYTDSHTTLLKLDNKYGGINVDVQISEGGVYISLSA
YSSGNAPALIINHTPYTINLWEKGSINVRSIQSYNRMFYTWENPAGPRKIVWEDNNGKEI
EDNLRKDNLGTFQLPDVNDKLFYVSFLDGTQRVLLFTTNLKIAEDCQLAGDLEIIDQEIM
LNIHGIGFSLVNNITKSELLYMCIASSGIIWETRKSLGGRWRALTAKEVNAIEEGYQRYI
KELQIGKDADYRVMLEPKLMVDYLNMEMLKPHRRYMRRTFQTGLWLQYRTSAHQVQLHAK
INRLQIDNQLSECVFPVILAPVPPPKSVTQSTVMKPFAELSMVKRLLEHSTVQQFRYFKV
LVQEFHIKVDIVFLNAIMSLLEANEVNDAEESALFRTDMKLVNEPLMYHVSLITTAEQKN
FFDLLHFSPLKIHISFSMTGSGSGPSAMPQVLNVLLQGIGVTLTDINDIVFKLAYFERNY
VFMTNKQLISEATTHYAGQAIKQAYVLVLGLDVIGNPYGLVVGTMKGIEDLFYEPFQGAI
QGPGEFAEGLFLGVRSMLGHTVGGMAGAVSKITGAMGKGIAALTFDKDYQRKRQEQLTKQ
PANLQEGLARSGKGLVMGVVDGVTGVVMKPISGAKEEGVEGFFKGFGKGVVGLVTRPTAG
VIDFASGSFGAVKRATELNEETRRVRSPRFLQPDSLVRPYIKEEAEGNKILMELEKGKYA
HTDVYVYHIFINKDVLLLTDKRLSYLEHNDLFGGWRVDWTHTWNEFSESPKIVERGVQIF
LKDTSKKKKFGGFFGSADQSKILLITDQNIKQLLCSKIQEQINQYGV
NT seq
9864 nt
NT seq
+upstream
nt +downstream
nt
atggtttttgaatcaatcattgcggagctcctcaacaaggtgatcggcgagtatattgag
aacttggactatacgcaacttaaagtcagtctctggggaggagatcttgtattaaatgat
ctgttaataaaagaatctgcattagatgtgctagatcttcctgtaagattggaatatggc
cgtttaggaaaattgatactaaaaattccatttaaagatatgtggaatggtcagattgat
gctatagtcgaagaattgtttatattagtagtgcctacaagtcaggttgcatacaatgaa
gaaaaagaaagcaaagcgcagttggaagccaaacgagcagaactcgacagagtagaaaag
aggaagcagttagaagatataaaatcacaagaaaaactggacgactcgatggttgaaaag
ctggtcgctcgtatgatcaagaacattcatgtagagatcaagagaattcatgtgcgatac
gaggatcatgttacttttaaagaacatccattttccgtcggtttcaccttgaacaccttc
gttctggaaagttgcacagattcgtgggagacgacaggcaatctgaaggatatgtatgcc
attccgcagatcttcaaactgtgtagcctggacggactggccgtttatctcaacacaagc
gtggagcagtacagcaagagcccacagtcctcatattccaatctcttctgtcaaggtatc
gcgaccacggattatattccgacgggttatcaatatctgttaggaccgatcaacgtcaag
tccaagctcagacttaatcccaaacccgaatcggacaatagcgattacactattcccaag
gtatggctggatctggaaatgcaaaaattgcgaatcggtttgacgaagcggcagtatcag
accttgatacggctgggcgaaggcctcgatcaggcgcgaaaagccgccccataccgaaag
taccggccgaatttgacatcgtatcgcggccattacaaggagtggtggcatttcgcgtat
acttgtgtcctcgaggaaaccgtacgaagatatcgtcgtaactggaattggattcacatg
aaacagcatcgcgatacttgccgcgattacgcccaagcctaccaaacgaagctaacgacg
aagaagcttgcgaaggagatcgcggagcaattgacgcattgtgaaatgaaattagacatc
tttaatctggtaatcatacggcaacagatcgagatggaggtggagagactggcagagcga
gaaaagagtctgaaggcgaaacgaggttggttcggcttcctgtggaacagttcgcaagcc
gaggaaacaaaagaactcaattcagctgcggctattatgcgcagattcgaggaagcgatg
acgccgcaagagaaggagaagctttatcgggcaatcgactatcaagaaaacagcgcacca
gcacactatccggaaacatatgaaatgatcgatacttgtttctatctgcatggtctacag
atttctctgctggacacagataaagagcactcgtgcattttggacttgcagctgcatggt
gtacgagcgggttttaaatcgcgaccgtctgcaaacgcgattctcgtcaccgcctccatc
agtgatatgaagctattgggtgtgacacaagacggccatattccctcgcttttcaaccca
gaacatggcagttctgacagcgccttgctgtcggtttcttacgagaaaaatccgattgac
aagttgtgcggcgatcgcgtcatcgttaagtcccgatccgccgacataatctatgatgca
caaaccattatagaactggtcaacatgtttaaggtgcaagactcttcgacgctaaaccag
ctacagacagcagcagcggagcaattagagggcttgaaggaaatgtcggcgcttgggcta
gagtacgctatacaaaaacattcaatcctagatatacaagtggatatgcaggcctcacaa
cttatcataccgcatgggggcttttatggagactcaaaatcattgatcgtcgtcaatctt
ggcagtttaaagatgcattccttggagaatggcaagagtgacatggctggcgccagcgtt
aaacaactagttagcatgggcaagagcgaagaggaagtgcttctgcacttgagggagcat
agttatgacaaatttgttttggagatagttaactttcaggtgctagtctcattgccgaac
gaagaatggcgatcagctcttgcaagcaccgagagttccctgacgttacttcatccgacc
acattagagatccagttccataaatgtttggtgatggacgatcctttgttgccgaaactc
cgacttcttggtcgcctgccgtcagtaaccgtgaacataacggatgttcgattactacag
gcgctgtcgattgcacagagcattccgctgcccgaagaagaaaaaaccgcagaactacat
cgaacatctctttctaaatccatctcacaattgtcactgaaagagcttggtaccacgata
tccactattgccgacaagagaaagcaacaagaaggaacaatgtctgtaccgataaagcag
actactgatttggaaatgaaattcgaaatgaaggaatttacgctttcgatatctaggcaa
cgtgatgacaatgtggaatcggaatttgtcagattccaggtgctgcaggtagaggcagaa
atgctgcagcgtacatacgatcaagaggtgcaattgcgactaggcggcgtgcaattgcga
cagctgcatgaagatcaagagattttcattgtgaatacaccgatgtcgaccggtagagat
gaatatctaattgttgtgcggtacataaatgtaaataaacgctcgccagaattcatcacg
cgacacggttctgtcgtgaaattgttagtactggaattcacttcgctagacatgttattg
catcaggaggcgctcattgagttgctacggtttagcacatatatacaggaccgaatgaat
tcgcttgaaggtgttcagaagaaagaagtcgaacatcttcgaccaactcagctcgcttct
atccaagaagaaacttccggtttctttaaggagcagatgcagagacaaaaatccagatcc
actggacgacgtagaagacaaacagtcgagtgcatcgatttaaaagtgagtgctaaggtc
ggctcgattaatctgaaaatctccagcgttattcgagatattagcgcactctacatcgag
ggcctcagcgctagttttctcagcaagtcttcgtattcgcaagtgaatgctgatttagcc
tccatcagcattaaaaatcttaatcctgcttccgtgtacaaggatattgtggccgtagag
ggtaccgaatctttgcagattcaagcggttatgtataacatcgagtcatgggaagtggat
aaaaacaacatgtccgtcaaagtgacgatgggttgccatcgtatcgtcttcctgaatgcg
tttgttaccagcgtgatgaatttcttgaacaactttcaaacagcgcagaaagctatcaaa
gacgcttcggcggcagcggcggaagctgcgaggacaaacattaaggatgttcaagaaagc
gcctctcgcatccagttatgtatcaaaatcaaggcacctgtcgtatatgtaccgatgaac
tccaagagcgagtacagtttaatgttggatatgggcaatcttatggtgtgcaacgtcttc
aagaaattggaagcgacaaatgaggaaaccaacgaatgtcccatagtggatgaaatgaaa
attgagcttcagaacttgaagcttttgcgagtccgactgaatacggagaaatttattaac
gaaaacgaagtgcttatactagagccggtgacgtttacgctgctaatgaagcgtaatctg
tcaaccgcttggttcaccgctattccggacattgatatgtcgggcaggttgaataaaatt
aatctactattgagcaaagaagattatgctacaattctaaaggtactggagcagaatctg
ggcgagaccttcgaagattcgaaacttgtgcaacctgtaccatctactgtgaaatccgaa
tacagcggagagctacagattcagccggcgtacaaatacgaagtcagcacatcgcaagaa
ccgccatcgacggattcgcaggagcgacatgcccacacgttcgtcaagttcgagtttatc
atggatagcctggtgatcaatttatttaccggcggttccaagctgctgcagtcgcaaaca
tcgccgctgcatttgcccgagaatggattagcgcgcttcagtctcacgcattttgccgtg
aaaggtcgcgtatttgcggatggattgctggccacatcaattctgttgatgaactgtaca
ctagatgacacacgacagagtcgagaaggttctttggtgcgaatcatggagagaatcagc
atgccgagcggcggtgccagcgaagatcacctcgacaaagagcatgccaagtacaatacc
agaagcatgctggatgtgacggtgcgccagagtccgaatgacacattcgccgacgtgcgt
gtattctccttcagtattatcgtgtcccttgattacctcatgaagatcaaggacttcttc
gacgtagatactgcgggcaagactatcgccacaacctccctgcagtcttcgtcgaaaggc
gaatcggtggtatcatcaaagaaaaaacatccgacacaacaaccagttgctccgacgccc
aaaatgttgactgtgaatctacatgtggagaaaccggatattattctgctcgaggacatg
gacgacatcaactcgaattgcataatattgaacacagagctgttattgaaaatgcgcatt
atgggagaacaccaagtgatcacaggctccattaaggatttctctctactcacggggata
tataatcctacgaaaagagccgattggatctatcaggtcctgaaaccatgtagcatcagt
gttgccggttccacgccggaaggtaaaggacttcacttggacatttgttgtacagatata
cacatatctgtttcgccaggtgtgatcgaaatattgaataaggtcgttcacacgatgaca
aagaaggaggaggaggacaaggaagtcattaaagccgaaccgaattatgaaggattgtgg
attgtcacacccttcgaggagaacgattattggtttttaaagacagaaattgcgctggaa
gctcttgaagagtttacatatccagatgatgaaattacaactgcttataaatccgaatta
gcaattatttcggctccgacaatcttgtttactctcgaggcaggtgtcgggaacaaaact
ctacccatgttactgcttcatgtgggctttcaaagcaacatcaatgattggagcacgaaa
acgatgggcgtcgattgtacgatgtctgtaatcatggcgtactataacagccgcctagct
ctgtgggaaccgttgattgaaccgatagaaggttctgataatggcaaacgtgtttctaca
ccgtgggagttaaagacaaaggttcaatttaatgatatattactggactcgagaggcgct
agcgcggttagtcccacttcggatagcgagcctgaagaactaccaaatcagtccactaag
atgtccatcgacatcacatcttctgacaatctggagataactgtaacaaagacatgtttg
gacgtgctgaagcaactcggccaatcgttttcctcggctatggaagccagtggaaaagga
cctactaagaaggtggcgccgtacatgctgaagaacgaaactggtctgccaatgatactt
gatttggaacatagtctctttaagatattcgatgatggatcaagaatacagaatgatagc
aattcgtacatggaagtaatccttgagaccggtgcgtcgattgaactggcaccaaagaca
tccaagttggatacacatcttctcaaacagttaaaagcagaaaccgtgaaagacagggag
gatagtaaatttactgtttcttttaaaggtatccaaggcaaattggcgatacctgttttg
aaggcggacaagagattcttctctttgaagtaccgtaaagagggctccgaggaatggggc
attgtatcggacgtcattgtggaagaaggtagcacgatcgtcactcttagaagcatactt
cagatccacaatcattttgcgcagccgatagcggtttattatatgacgaagcgcggaaac
gaggttgagtgcgtaggaacggtggcaccagatgagaagctcaatttacccctcgacgct
gtgtacactccgaccaacatctattggctcttctttagtgttgaaggatacatggtgtca
gttgagccattcatctggaaggatctacagaaaacagtttccatgacaaagctactaaaa
tgtgaatctcgatccaagcaggatgtcacagaaccattttatattcaggccgtaggagaa
atcgaacaggtgtattttgaaaatactactcgtcacaccatggctagtaccatctacaat
gtacatctatatccatccatatatctgaaaaactttctgccgatcgatatcatcatctct
ttgccaggcattgttcaggagaatttactcgaagccagtgcttccttgcaactgcccacg
atcgatccagtcaaatcaagtataattatcaagttgccaaattacctggaaaaggactgg
tcgtgtaaaggtgaaattgtggcaaacccacctgagttcgcagtctggtccttcgagtcc
ttcgatagcgcgcagaaagtaacattggatctcggaatgcatacatcctacaaatatggt
tcgatcgtcatggcgctgtactgtcctttctggatgttgaacaagactggcctgatgtta
tcctacagaaagtcaagtaagggtggcaaagagcactcgagtccgatcaagaaattcgtt
tccactatgaaaccccatcagcaacgaaggaggaggaaaacgcgcgcgacaacggatgat
tacttgaatgtcctgtaccacccggagcactttaagggacctattctgttttcattccgt
tcgaaggctttctttggcaagaagaaggccatgatcagagtggaggacggagagtggtct
gaaaaattctcaattgacgttgcaggcagcgagggtgtggtggcatgcaaatacaacgga
atgacatatcagattggagtacataatcaactgacctacaactcattgaccaaacaaatt
acatttacaccctactacatactcatcaataatgcagattttctcatagaatgccaagag
ggcgatcgtccagcggatccgatgatcaaagtacctcccggcgaatgcgcagctttgtgg
cctcgaatcgagcatgacaacaaaactttgagggccaaggtcgcgggtcaacccgagaaa
accgcggctttcatttacactgatagtcacacaactttattgaaattagataataagtac
ggagggatcaatgtagatgtgcaaatcagtgaaggtggtgtctacatctctctgtcagca
tatagttcaggtaacgcaccggctctgatcatcaatcatactccgtataccatcaatctg
tgggagaagggttcaatcaacgtcaggtccatacagtcgtacaacagaatgttttatact
tgggaaaatccagcaggtccgcgaaaaatcgtctgggaagataataacggcaaggaaatc
gaagataatcttcgtaaagataatctcggtaccttccaattgccggacgtaaatgataaa
ctgttctacgtgtcgtttctagacggtactcaacgagtgcttttattcactacgaatctg
aagatagccgaagattgtcagctggctggtgatcttgaaataatcgatcaggaaataatg
ttgaacatacacggtattgggttctctcttgtgaacaatattaccaaatccgaattgtta
tacatgtgcatcgctagttctggaattatatgggaaacccgcaagtccctcggtggccga
tggcgagcgttaaccgccaaggaggtcaatgccatcgaggagggatatcagcgatacatt
aaggaattgcagattggcaaggatgcagactatcgggtaatgctggagccaaagttaatg
gtggattatctgaatatggaaatgttgaagccacatcgtagatacatgcgacgtacattt
cagactggactttggctacaataccgcacttcagcgcatcaagtacagttgcatgcaaag
atcaatagactgcagatcgataatcaattatcagagtgtgtcttcccggttatattggct
ccggttccaccgccaaagagcgtaacgcagagcacagtaatgaaaccttttgcggaactc
agtatggtaaaacgcctactggagcatagtaccgtgcaacaatttcgatattttaaagtt
ctcgtacaagagttccacatcaaggtggacatcgtttttttgaatgcgataatgagcctt
ttggaagcaaacgaagtcaatgatgcggaggagagtgcattattccgtactgatatgaaa
ctggtcaatgaaccgctcatgtatcacgtcagcctgattaccacggctgagcaaaagaac
tttttcgatctactgcatttctcgccacttaagatacacatcagtttctcgatgactggt
agtggcagtggaccctctgcaatgccacaagtgcttaatgtgctgttgcaaggaataggt
gtgacactaacggatattaacgacatcgtgttcaaattggcgtatttcgagagaaactat
gtattcatgacaaacaaacagctcatctccgaagcgactactcattatgcaggccaggcg
attaaacaggcttatgtgctcgtgctgggacttgatgtcatcggtaatccgtacgggctt
gtggtcgggactatgaagggcattgaggatttgttctacgaacctttccaaggggccata
cagggcccgggagaattcgcggagggtctgtttcttggagtgcgcagcatgttgggccat
accgtcggcggaatggcgggcgcagtgtcgaagatcacgggagcaatgggcaagggtata
gctgctctgaccttcgacaaagattaccagcgaaagagacaagaacagctgaccaaacaa
cctgccaacttgcaagaaggtctcgctcgaagtggaaagggtttagtaatgggtgtagtc
gacggtgtaacaggtgtggtaatgaaacctatatcaggagcaaaagaagaaggagtagaa
gggttcttcaaaggattcggaaagggtgtcgttggactcgttaccagacctactgccggc
gttattgactttgcgagcggttcctttggagctgtcaaacgagctaccgagttgaacgag
gagacaaggagagtacgatcgcctagatttctgcaaccagacagtcttgttagaccttac
ataaaggaagaagctgaaggcaacaagatattgatggagctggagaaaggaaaatacgca
catacggacgtttatgtctatcacatatttattaacaaagatgtactgttgctcactgac
aaaagattatcatacctcgaacataatgatctgtttggtggttggcgggttgactggact
catacttggaacgaatttagcgaatcaccaaagattgtagagagaggtgtgcaaatcttt
cttaaagacaccagcaaaaagaagaaattcggcggtttttttggtagcgcggatcaatca
aagatacttttaataacggatcaaaatattaaacagttgttgtgcagtaaaatacaggag
cagatcaaccaatacggagtataa
DBGET
integrated database retrieval system
