Camponotus floridanus (Florida carpenter ant): 105253254
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Entry
105253254 CDS
T03919
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105253254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105253254
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105253254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
105253254
NCBI-ProteinID:
XP_011259452
UniProt:
E1ZXB9
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MSFGTGFGTSTSTPAPTFAFGTTPASTATPVKPVAGFGTPSFGFSTPTTSTPSLFGTPST
QTTGFGTGTGFGTPAATGFGGTSTTGFGSAPTFGSTSTSAFGTGPAFGSTPASSATTGFG
TTSTFGNPPASTTGFGGFGTATTTSSLSFGNFGGFGTTTTTSAPSLFGGFGTTNTVSTGF
GASTGFGTFGSKPVTTSGTPGFGGFGTGFTGFGTGLTQPQQQQQQQQQQPADNISEALYN
AVFNCQLYNDERDNTIARWNLIQALWGTGKAYYSINAPPIDLTQENSLCRFKAIGYSRIP
DADNNDGLVVLCFNKKEKDVQDGKQQLIVFLSGLLGNKPNLTVTIDNIKSTGENKSQVTI
YVSEKGITGSYRKIPANEFVAYLSQMMQKQQLLQNGVEDIFPLMKLDPSQLKEYLDNPPC
AIDARLWKQAQLDNPNPELYIPVPMIGFQQVKHRLKCQEEETARHRAFLDMTAEKIQGVQ
RQHTATQARLKEHRRTLLELQHRVLQVLVRQEITRKIGLSLQPEEEVLTRRFEAMHSQIS
APTQYKGRISEMLSQLRMRRHIDIQNQERYTMDPIAQDDIKAYLSMEQQGMAQLISTINT
DLESLKIIKDGMSDLLMSQSIS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcggcaccggctttggaacgtccacgtcgacgcccgcacccacgttcgccttc
ggcaccacgccggcctccacggcgacgccggttaaacctgtggcaggatttggaacaccc
tcattcggatttagtacaccaactacttcaacaccaagtttatttggtaccccgtcgact
caaactactggatttggtactggaacaggatttggtactccagcagctacaggatttggt
ggcacgtcaaccacaggttttggatctgcccctacatttggtagcacatcaactagtgcc
tttggtacagggccagcttttgggagtactcctgcttcctctgcaactactggatttggt
acaacttcgacttttggcaatcctccagcctccacgaccggtttcggtggatttggaaca
gcaacaacaacatcgtcattaagtttcggaaatttcggtggatttggaacaactactact
acatctgctcctagtttgtttggtggattcggtactacaaataccgtctcaaccggtttc
ggcgcttccacaggttttggtacatttggaagcaaaccagtcaccactagtggtacacct
ggatttggtggatttgggacaggatttactggatttggtactggattgacgcaacctcaa
caacaacaacaacagcaacaacaacaacctgcagataatatatcagaagctctttataat
gctgtgtttaattgccaattgtataatgacgagcgagacaatactattgccagatggaat
cttattcaagcattatggggtacaggaaaggcttattattctataaacgcaccacctata
gatcttacccaggaaaattcgttgtgcagattcaaagccatcggatatagccgtataccc
gatgctgacaacaacgatggtttagtagtgttatgtttcaataaaaaagaaaaggatgta
caggatggcaaacaacaattgattgtatttctgagtggtttactggggaataagcccaat
ctaacagtaactattgacaatattaaatccacaggagaaaataagagtcaagtgacaata
tatgtgtcagaaaaaggaattactggctcttatagaaaaattcctgccaacgaattcgtt
gcgtatttgtcacagatgatgcaaaagcaacaactgctacaaaatggagttgaagatata
tttccactaatgaaactcgatccgtcccagttaaaagaatatttagataatccaccttgt
gctattgatgccagattatggaagcaagcgcaattggataatcccaatccagaattgtat
atcccagttcctatgattggatttcagcaagttaaacacagattgaaatgtcaagaagag
gagacggctagacatagagcgttcttagatatgacagcagaaaaaatacaaggcgtacag
agacagcatacagctacgcaagcccggctcaaggaacatagacgtacattattggaactt
caacacagagttctgcaggtgttagttcgacaagaaattacgcgcaaaattggattatct
ttgcaaccggaagaagaagttttaacacgcagatttgaagcgatgcattcgcaaatcagt
gccccgacacaatataaaggtagaattagcgaaatgctttctcagcttagaatgagacgg
catatcgatattcaaaatcaggaaagatatacaatggatcctatagcacaagatgatatt
aaagcgtacctgagtatggaacaacagggcatggcgcaacttatttcaacaataaatacc
gatttagaaagcttaaaaattatcaaagacggaatgtcggatcttttaatgagccaaagt
atatcctga
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