Camponotus floridanus (Florida carpenter ant): 105253575
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Entry
105253575 CDS
T03919
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03013
Nucleocytoplasmic transport
cfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105253575
09122 Translation
03013 Nucleocytoplasmic transport
105253575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105253575
03041 Spliceosome [BR:
cfo03041
]
105253575
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105253575
Spliceosome [BR:
cfo03041
]
Complex C
Other components
EJC/TREX
105253575
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105253575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
105253575
NCBI-ProteinID:
XP_025263234
LinkDB
All DBs
Position
Unknown
AA seq
1431 aa
AA seq
DB search
MASKAWHTELWKSWDKHGRNDFLKLIKHKFKEGNTPEWKRGLYELISNGIHGNVKKDSVV
QTLGELMNFDGAIPSAIVDIFTLIDAEAHNEERNNFYYIVKESEKFLTDRILKERLEIET
LQDVGTLKNKNFQTKFIKVKTKLYYKQRKFNLFREESEGYSKLIVELNQERPGNEVASTL
EIVKSLIGYFNLDPNRVLDILLETFENRPQDDALFIPLIRSYMSDQQVLCEVLGFKYCST
VNATPFSLQKVTALMLQHNVIKLDDILPWLVPDDKIIISDHEQAMKQAKEYVRKLSVIST
KDKEDVVEEKEYPQDKYSNNQKFVLCEALLEIGAWEVAQNLFNRLPDYCFTDQRPIASAL
CKMIQALIEPVYRKHCIVSLKLPGRKIPPLKSALAPPLIHDLEDIHEHLLPMLIVLGPNL
HHDPILMYKVMRLCHTAIKHCPLDSGKQPLNKNCTLYYDVLTILDVALLPSLSFMDCNCC
VAEELWNILKYYPYQNRYCLYARWKNDTPLQHAALLRKRADAQKKIKSIMKRVSKETIKP
VGRSIGKLTHSSPGVLFDYVLIQIQLYDNLIGPVVDSLKYLTNISYDVLGYCLVEALAGA
DRDRFKHDGTSISLWLQSLASFCGAIFKKYNIELTGLLQYVANQLKAQKSLDLLILKEIV
QKMAGIEAAEEMTSDQLDAMAGGDLLKNEAGYFSQVRNTKKSSQRLKEALSEHDLAVALC
LLMAQQKHCVVYRETDKSHLKLVGKLYDQCQDTLVQFGTFLGSTMTVDEYVERLPSIHSM
LQDNHIHSDVAFFLARPMFAHAINIKYDALRKADPNYKKMSTAMKQLKYAEAAQAVMAPV
AQSVRPLHPLKVWEDISPQFLVTFWSLSMYDLYVPVESYQREISKLKQLAAQTADSKDMN
ISKGKKEQERYTTLIEKLQDEKKKQEEHVEKVFAYLRQEKDTWFLSRSAKSAKNETITQF
LQLCLFPRCTFTTVDAMYCAKFVHTIHSLKTANFSTLLCYDRLFCDITYSVTSCTENEAN
RYGRFLCAMLETVMRWHSEKAIFDKECSNYPGFVTKFRVSNQFSEANDMVGFENYRHVCH
KWHYKITKAIVVCLDSKDYVQIRNSLIILIKILPHFPVLAKLSQILERKVEKVREEERGQ
RQDLHVLATSYSGQLKAKTPNMIRESDFHHVGDKTGKTQDTANNDTNEKVSNGVAAKENN
GDSRPEKENKEQREKRSSSNQTHHNMNSLNSENSEKFRKKEDSKDVSEVKEKYVKKEEVK
DDEGLDKKDRKYYKEEHYYSSGIDNLDRDLSSVSNSSASSGPTQEGPERDVKRRKVESAP
KQEGRRAEAVFDKKERSSKGKTRDEQKEQRKEKKQGRKRDRTEESIVITEQKRRKDDERA
KGTHQNGDIPEHREKHHYSKEKSPYTKDRPHEREGRESRDKHRRSSDPKRR
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaaagcatggcatacagaattgtggaagtcatgggataagcacggaagaaat
gatttcctcaagctaatcaagcacaaatttaaggaaggcaacacaccagaatggaagcgc
ggattgtacgaattaatatcgaatggaatccatgggaatgtaaaaaaggacagtgtagta
cagacattaggtgaacttatgaattttgatggtgcaataccatctgcaatagtagatata
tttactttaatcgatgcagaagcacataatgaagaaaggaacaatttttattatattgtg
aaagaatctgaaaagtttttaactgatagaatattgaaagaacgtctagagattgaaact
ttacaagatgtaggaacgttaaaaaacaaaaattttcaaaccaagtttataaaagtcaag
acaaaattatattataagcagagaaagtttaatttatttcgcgaggagagcgagggttac
tccaagctcattgtagaattaaatcaggaacgtccaggcaacgaggtagcctcgacgttg
gaaatcgttaaatctctcattggttattttaatcttgatcctaatagggtactcgacatc
ttgctagagacttttgagaatcggccgcaagacgatgctctatttattcccttaatacgc
tcgtacatgagtgatcaacaggtactttgcgaggtgttaggattcaaatattgctccacc
gtcaacgccacgccgttctcgctgcaaaaggtcaccgcgcttatgctgcaacataacgtg
attaagctggacgacatattaccttggctcgtgccagacgataaaattatcatatcagat
catgaacaggcgatgaaacaggccaaggaatacgtgcggaaattgagcgtgatctcgaca
aaggacaaagaggatgttgtggaagagaaggagtatccacaagacaaatattcaaacaat
cagaaatttgtattatgcgaagcccttctggaaatcggggcttgggaagtggcgcaaaac
ctattcaatcgattgccagattattgcttcacggatcaacgtcccatagcttcagcactg
tgcaaaatgattcaggctcttatcgaacccgtatataggaagcattgcatcgtttccctg
aaattgccaggtcgtaagatacctcctttaaaaagtgctctcgcaccaccgctgatccac
gacctggaggacattcacgagcatttgttgccgatgttgatcgtgcttggaccgaacctg
catcacgaccccattctcatgtacaaggtgatgaggctgtgccataccgcaatcaagcac
tgtccactcgactcaggcaaacagccgttgaacaagaactgcaccctgtactacgacgta
ttgacgatcctcgacgtcgctctgctaccctcgctttccttcatggactgcaactgctgc
gtcgccgaagaactgtggaacatcctgaaatattacccctatcaaaatcgctactgcctg
tatgcgcgctggaagaacgacactccgctgcagcacgcggcgctgctgcggaaacgggcg
gacgcccagaagaagatcaaatcgatcatgaagcgcgtgagcaaggagacgatcaagccg
gttggccgatcgataggcaaacttacgcattcctcgccgggtgtattattcgattacgtt
cttatacagatccagttatacgacaatctaataggacctgtggtagactccttaaaatat
ttgacaaatatttcgtacgacgtattaggttactgtcttgtggaggcactagcgggtgct
gacagggacagattcaaacatgacggcaccagtatatccttgtggttgcaatctctagct
tccttttgtggagcgatatttaagaaatataacattgaattgacaggattgttacaatac
gtagcgaatcaacttaaagctcaaaagagcctagacctattaatattgaaggagatagta
caaaaaatggctggtatcgaggcagccgaagaaatgacgtctgatcaattagatgcaatg
gcgggtggagatttgttgaaaaatgaggccggttacttcagtcaagtccgcaacacgaaa
aagtcctcgcagcgtttgaaggaagctctttccgagcatgatctcgcggtcgccttgtgc
ttgctaatggcacaacaaaaacattgtgtcgtttacagagagacggacaaatctcatctg
aaacttgttggcaagttgtatgatcagtgtcaagatacactggtgcaatttggaacgttc
ctgggatcaactatgacggtggatgagtacgtggagcgactaccgtcgattcattctatg
cttcaggataatcacatacactcggatgtcgcatttttcctggcgaggccaatgtttgca
catgccataaatataaaatatgacgcccttcgtaaagccgatccgaattacaagaaaatg
tctacggctatgaaacaattgaaatatgcggaagccgcgcaagctgttatggcacctgtc
gctcaatcagtcagaccgttgcatcctctaaaagtatgggaggacatatcaccgcaattc
ttagtcacgttttggtccctgtcgatgtacgacttgtatgtgccagtggaaagttatcaa
agagaaatcagcaagttgaagcaactcgcggcacagacggccgattccaaagatatgaat
ataagtaaaggaaaaaaggaacaggaaaggtatactactcttattgagaagctgcaggac
gaaaagaagaagcaagaggaacacgttgaaaaagtctttgcgtacctgaggcaagagaag
gatacatggtttttgtcacgaagcgccaagtctgcgaagaacgagacgataacgcaattt
ctgcagttgtgcctatttccgcggtgtacattcacaactgtggacgccatgtactgtgcg
aaatttgtacataccatccactccctgaagactgcaaatttttcgaccctgctttgctac
gatcgtcttttctgtgatattacatattcagtcacttcgtgcacagagaatgaagcaaat
cgatatggcagatttttgtgcgccatgctggagactgtgatgaggtggcattccgagaaa
gccatatttgataaggaatgcagtaattatcccggatttgtgaccaaatttcgtgtgagc
aatcaattttccgaagcgaatgatatggtcggatttgaaaattatagacacgtgtgtcac
aaatggcattataaaatcacaaaggctattgtagtatgtctagattctaaggattatgtg
caaataaggaattctttgataatattaatcaagatattgccgcattttcctgtcttggcg
aaactctctcagatccttgagcgaaaagtagaaaaagtgagagaagaagagcgtggccag
cgccaggatttacatgttctggctacatcgtacagtggacaactgaaggctaaaactccc
aatatgatacgcgaatcagatttccatcacgtgggcgacaagactggaaagacacaagac
actgcaaataatgatacaaacgaaaaagttagcaatggagtagcagcgaaagaaaataac
ggagattctcgtccggaaaaagaaaataaagagcaacgagaaaaacgaagttcgtctaat
caaactcatcacaatatgaattctttgaatagtgaaaactctgaaaagttcaggaagaaa
gaagatagtaaggatgtctcagaagtaaaagagaaatatgtcaagaaagaagaagtaaaa
gacgatgaaggattagataaaaaggatcgcaaatattataaagaagaacattattatagc
agtggtatagacaatttagacagagacctgtccagtgtatcaaatagtagcgctagttcg
ggacctacgcaagaaggtcctgagagagatgtaaaaagaagaaaagtagagagtgcccca
aagcaggaaggaagacgtgccgaggctgtctttgataaaaaagaacgctccagcaaggga
aaaacacgtgacgaacagaaggaacagcgtaaagaaaagaaacaaggacgaaaaagggat
cggacggaagaatctatagtgattactgaacaaaaacggaggaaagatgatgagagagcc
aaaggtacgcatcagaacggtgacattcccgaacatagagagaagcatcattacagtaag
gaaaaatctccatacacaaaggatcgtcctcacgaacgcgaaggacgcgaaagccgtgac
aaacatagaaggagttcagacccaaaacgaagatga
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integrated database retrieval system
