Camponotus floridanus (Florida carpenter ant): 105253698
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Entry
105253698 CDS
T03919
Name
(RefSeq) histone deacetylase Rpd3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03082
ATP-dependent chromatin remodeling
cfo03083
Polycomb repressive complex
cfo04213
Longevity regulating pathway - multiple species
cfo04330
Notch signaling pathway
cfo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105253698
03083 Polycomb repressive complex
105253698
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105253698
04350 TGF-beta signaling pathway
105253698
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
105253698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfo03036
]
105253698
Enzymes [BR:
cfo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105253698
Chromosome and associated proteins [BR:
cfo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
105253698
HDAC complexes
Sin3A-HDAC complex
105253698
BRAF-HDAC complex
105253698
REST complex
105253698
SHIP complex
105253698
MiDAC complex
105253698
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
105253698
Heterochromatin formation proteins
Other heterochromatin formation proteins
105253698
Chromatin remodeling factors
NuRD complex
105253698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
105253698
NCBI-ProteinID:
XP_025262015
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MQQPKKRVCYYYDSDIGNYYYGQGHPMKPHRIKMTHNLLLNYGLYRKMEIYRPHKATQEE
MTKFHSDDYIRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVK
LNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGV
EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVP
IISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKRYNLPFLMVGGGGY
TIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYLEKIK
TRLFENLRMLPHAPGVQVQAIPEDGAIVDVFEPEEKMNLDERLSQHDLDKRIQHENEYSD
SEDEGEGGRRDNRSYKGTKKRPRLEKGQDMDMHIININMKKEDDVKLESKGNDKDEKINP
HNEEIKKDSGANL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcctaagaaacgtgtctgctattattatgacagtgatattggaaattattat
tatggtcaaggacatccgatgaaacctcatcgtataaagatgacacacaatttactcttg
aattatgggctttatagaaagatggaaatatatcggcctcataaagcgacacaagaagaa
atgacaaagtttcatagcgacgattacatccgatttttgagatctatacggccagataat
atgacagagtacaacaaacaaatgcaacgatttaatgtaggagaagattgtcctgtcttt
gatggcttgtatgagttttgtcaattatcagctggtggatctgtagctgccgctgtcaaa
ctcaacaaacaagcctcagaaatctgcatcaattggggtggtggcttgcatcacgcaaaa
aaaagtgaagcgtcaggtttttgttatgtaaacgacattgtgctcggaattttggaacta
ctgaaatatcatcaaagagttctgtacattgacattgatgttcatcatggcgatggtgtg
gaggaagctttttatacaacagatagagtaatgacagtttcatttcataaatatggtgaa
tatttccctggaactggagatctccgcgatattggagcaggaaagggaaaatattatgct
gttaacatacctttgagggatggtatggatgatgaaagttacgaatcaatatttgttcct
atcatttcaaaagtaatggaaacttttcaaccttctgctgtcgttttgcaatgtggtgct
gattcattgacgggcgaccgattgggatgttttaatttgactgtgaagggacatggcaaa
tgcgtggaatttgtaaagagatataatttacctttcttgatggtaggaggtggcggttat
acaatcagaaatgtgtccagatgttggacatatgagacatctgtagctctgggatccgaa
atcgcaaatgaattaccatataatgattattttgaatactttggtcctgactttaaatta
cacataagtccctcaaatatgacaaatcaaaacactcctgaatatcttgaaaaaattaaa
acaagattatttgaaaacttaagaatgttacctcatgcacctggtgtgcaagttcaagca
ataccagaggacggtgccattgttgatgtttttgaaccagaagaaaagatgaatcttgat
gaaagattgtctcaacatgacttggacaagaggatacaacatgaaaatgaatacagtgat
agtgaagatgaaggagaaggtggacgaagagataacagatcatataaaggaactaagaag
cgaccacgtttggaaaaaggtcaggatatggatatgcatatcataaatattaatatgaaa
aaagaggatgatgtaaaattggaatcaaaaggaaatgacaaagacgaaaaaataaatccc
cataatgaagaaataaagaaagatagtggggctaatctctga
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integrated database retrieval system
