Camponotus floridanus (Florida carpenter ant): 105254429
Help
Entry
105254429 CDS
T03919
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfo04121
]
105254429
Ubiquitin system [BR:
cfo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
105254429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
105254429
NCBI-ProteinID:
XP_025263522
LinkDB
All DBs
Position
Unknown
AA seq
1653 aa
AA seq
DB search
MVPTLCELSARCVASHIPFELVEHFYPPVPEQLQLRIAFWSFPDNEEDIRLYSCLANGSA
DEFLRGEHLYRAKTVKEPLQIGFHLSASVNSQTNGVRAQFNVAVTFDRRRITSCNCTCSS
TAYWCAHVVAVCLHRIHMPTQVCLRAPVSESLSRLHREQLQKFAQYLISELPQQILPTAQ
RLLDELLSTQPSAINSYCGAPDPTAGASAHDQTSWYLDEKTLHDNIKKILIKFCVPAPIV
FSDVNYLSTTAPPAASEWASLLRPLRGREPEGMWNLLSIVREMFKRNDRNAIPLLEIITE
ECMACEQILVWWFNTKVALLNGTGYGSKHNMNSNVHASQHACSSLCDEIVVLWRLAALNP
GLSPSEREMLHAQFMNWHLRIMDKVAKCRGGSSVSHNSHNRSNSSQKDSLKHDLTVFTGF
KSALEACYLDWDEYVLPGITYTAENNPMYHCPFTCFRHAGDTRTEVNQVNSSSAVLNYQP
PISHHHGRRPLNVGLVEYGYLDRRRLNPREFPMCSRSGGGDGNRSSVSSEGFCENDTDIP
DISESQVVLRQGCAQLNNCGDTDSQEGAGSESSSNSNVSMKNAQGSDKHRSNASSETHSD
SSDSSNNKPTCENGKCSRTNLAECRDKSRAAASKGVGIKNEQESDQEKEAGRPFKDESSS
SSSDSPSGDEYNVYYYDPKTVTNNSGLPSKYVKSNMHAPTTADASIVLNNLKKTEDPWDI
LFARAEGLYAHGHTREACIIGVQLAEELLANPPDLMIEGPPVPVKNKRKRQHVNPASHQV
TCLASATLAKCGFLCTVLAENPEYHNLAFRVGLFGLEMARPPANTKPLEVKLAHQESELV
GLLKRIPLGPTELAMIKQRAEQLRDGVMRSRGHALLPIMLASFIYDALDVPRVKLPAEID
PNLGFDAAVAVLGLKANVSEADHPLLCEGTRRQRGDLAITLLVHYKDDPVKLARIMDKLL
DRDVHQLIKSPILSSYYTSNPPTKSEMARFVHDEERSSPLGTDNGGNGDNIVGTSSRPHS
STSAELENGISALTIQPPIVQPPVPIRTKETRYKSKRLYPSIPNQPSEASAHFMCELAKT
VLSKAGGTSSTSLFTQPSTSQNHHGPHRALHMCAFQLGLYALGLHNCVSPNWLSRTYSSH
VSWITGQAMEIGAPAIWFLIDSWEGHLTPPEAVSIADKSSRGSDPNMVRAAAELALSCLP
HAHALNPNEIQRAISQCKEQSEAMLEKACITVENTAKGGGVYPEVLFQVAKYWYELYLRQ
TPGGDQQDEIPHDPLQLDLNGVLLVEPGPSVDLSNTQMMPGPAQTVVVTSTQPPPQPYTH
PTITTLAPLGVSMPYAVGPYSFVHPHHSIATFSGPMPSHRVTLPPAPHMQMYHPFPHHPG
HPQHPPHPHHPSPAAPPPPGPYYAPQPPPTPGTRHLYTMQQPLPAQAGVAGPLPGQNNLA
GPALVQPQPIISTVRAQPQVHRQSQTFSQQQLRTLVSAYRVGMLALETLARRVHDDRPQA
KYARNPPYGEDVKFLLRVAKRLGTQYMHQLCICAVNSIVSPFVLHHVALEAAQYLARNNP
AFIVHHLRSALLAPLVHKCQQMYIQCMHQKLYHLTAGDYEEFASIVCAARAAFQINPEGN
TQFKEWLQSIKRSQSCNKDLWAQINAALQQTGK
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctactctctgcgaactttcggcacgatgcgtcgcatctcatattcccttcgag
ttggtggaacacttctatcctcctgtaccggagcaactccagctgagaatagctttctgg
agttttcccgataacgaagaggatatacggctttattcgtgtctcgcgaatggtagtgcc
gatgaatttctccggggcgaacatctctaccgtgccaaaaccgtcaaggagccattgcag
atcggattccatctgagcgccagcgtaaactcgcaaacgaatggggtcagagcgcagttc
aacgtcgctgtaacctttgaccgacgcaggatcacatcatgtaactgtacctgctcctcc
acggcctattggtgcgcacacgtggtagccgtttgcctacacagaatacacatgccaaca
caagtatgcctgagggcgccggttagtgaatccttatctcgtctgcatcgggaacaactg
caaaagttcgctcaatacctcatcagtgaattgccgcagcagattttacctactgcccag
cggcttctggacgagctactctcgacccaaccgagcgccatcaacagttactgcggagca
ccagatccaacagccggtgcttccgctcacgatcagacttcctggtacttagacgagaag
acgttgcacgataacatcaagaagatcctcatcaagttctgcgttccagctcccatagtc
tttagtgatgttaattatttgagcactaccgcgccgccagctgcttccgaatgggcatcg
ttgctgcgaccgttgagaggtcgcgaaccggagggcatgtggaaccttctttccattgtg
cgagagatgttcaagagaaatgatcgcaacgccatccctcttttggagatcatcacggag
gaatgcatggcctgcgagcagatcctcgtctggtggttcaacaccaaagttgcattactg
aacggcactggatacggcagcaagcataatatgaacagcaacgttcacgcatctcaacat
gcgtgctcatctctgtgcgatgagatcgttgttctttggcgattggccgctctcaatccc
ggtctctctccttcggaacgcgagatgttgcacgctcaatttatgaattggcatttgagg
attatggataaagtcgccaaatgccgtggcggaagttctgtttcacataactcacataac
agaagcaacagttcgcagaaagattctctgaaacatgatctcacagtcttcaccggattc
aagtcggcacttgaggcttgctacttagattgggatgaatacgtcttgccgggaatcacg
tataccgccgagaataatcctatgtatcattgtcctttcacctgttttcgacatgctggc
gatacgaggacggaagttaatcaggtaaattccagttcagcggtattgaattatcaacca
ccgatctcgcatcatcacggtcgacggccgttgaatgtcggccttgtcgaatacggctat
ttggatagacggcggctgaatccgcgcgaatttccaatgtgttcgagaagcggcggcggc
gacggaaatcgcagcagcgttagctccgaaggtttctgcgagaatgataccgacattccc
gatatatctgaatctcaggttgttcttagacaaggttgtgctcaattaaataattgcggc
gacactgattcgcaggaaggggccggtagcgagtcatcttccaacagtaatgttagcatg
aagaacgctcaaggctcggacaagcatcgctcaaacgcctcgtccgagacacatagtgat
agtagtgatagtagtaataacaaacctacttgcgagaatggaaagtgtagtaggacgaat
ctcgcggagtgtcgtgacaagtcgcgcgcggctgcgtccaaaggggttggtattaaaaac
gaacaagaatccgatcaggaaaaggaagccggtagaccgtttaaggatgagagctcctcg
tccagtagtgacagtccttccggtgacgaatacaatgtttattattacgatccgaaaaca
gtgactaataatagcggtctgccgagtaaatatgttaaaagcaatatgcatgcccccacc
actgcggatgctagtatagttctgaataatttgaagaagacggaagatccatgggacatt
ctattcgcgcgggctgaggggctttacgctcatggtcatacgagggaagcctgtattatt
ggagtacaactagccgaggaactcttggcaaaccctcccgatcttatgatcgaggggccg
ccagtaccggtgaaaaacaagcggaaaaggcaacatgtgaacccggcatctcatcaagta
acgtgtctcgcatcagcgactttagcaaaatgtggatttctatgcacggtacttgccgag
aatccggaatatcataatttagcatttcgtgtaggtctttttggcttggagatggctaga
ccaccggctaacacgaaacctttggaggtcaagcttgctcatcaagaaagtgagttggta
ggtttgctaaaaagaattcctttgggaccgacagaattagctatgataaaacagagagcc
gaacaactaagagatggtgttatgagatcaagaggacacgcgctcttgcccattatgtta
gctagcttcatatatgatgcgcttgacgtaccaagagtgaaactacctgcagaaattgat
ccaaatcttggatttgatgctgctgtagctgtcttggggttgaaggcgaatgtgagcgaa
gcggatcatccacttctttgtgaaggaactcgtagacagagaggagatttggctattact
ttgctagtgcattacaaagatgatcccgtgaaattggccagaatcatggacaaattgctg
gatcgagacgttcatcaactcattaagtcacccattctcagtagttattacacttcgaat
ccacctactaaaagcgaaatggcacgatttgttcatgacgaagaacgctcgtcgccgctt
ggaacggacaatggtggaaatggtgataacatcgtcggcactagcagtagacctcatagt
agtacgagcgcggaattggaaaatggtatcagcgcactaaccatacaaccgccgattgtt
cagccacctgtgcctattagaactaaagaaacgcgatataagagtaaaaggctatatcca
tctattcccaatcagccttcggaagcgagtgcgcactttatgtgcgaattagcaaagacc
gtgttatcaaaggccggtggtaccagctcaacttctttattcactcaaccatctaccagt
caaaatcatcatggtccgcacagggcacttcacatgtgcgccttccaacttggcttgtat
gccctcggactccataattgcgttagcccaaattggctcagtcgcacgtattcgagtcac
gtatcctggataacaggccaggcgatggaaattggtgcgccagccatctggttcctcatt
gatagttgggaaggacatttgacgccaccggaagctgtcagtatagccgataagtcttcg
agaggcagtgatccaaatatggttagagcggcggcggagcttgctttatcttgcttacca
cacgcacatgcgctcaaccctaatgagattcagagagccatatctcaatgcaaagaacaa
agtgaggccatgctagagaaagcttgtatcacagtggagaataccgcaaaaggtggcggt
gtttatccagaagtgcttttccaagtggcaaagtattggtacgagttatatctccggcaa
actcctggtggagatcaacaggatgagattcctcatgatcctctacaattggatctcaac
ggggtattattagtcgagccgggaccttccgtagacctatcaaatactcaaatgatgccc
ggaccggcgcagacagttgttgttactagcacgcaaccacctcctcagccctacactcat
ccaacgattacaactctggcgcctttaggagtcagtatgccatatgccgtaggcccgtac
agctttgtacatcctcaccattctatcgcgacatttagcggtccgatgccttcgcatcga
gtcactttaccgcctgcaccgcatatgcaaatgtaccatccgtttccgcatcatcctgga
caccctcaacatccaccgcatccacatcatccatctccggctgccccacctccacctgga
ccgtattacgcgccgcaacctccaccgacgccaggaacgcgtcatttatacacgatgcaa
caacctcttccggcccaagcaggagtggctggtcctctccctgggcaaaataacttggct
ggacctgcgttagttcagccacaacccataatatcgactgtgagagctcaacctcaggtt
catagacaaagtcagacatttagtcaacaacaattgcggactcttgtttctgcataccgt
gtgggtatgctagcgttggaaactttggctcgcagagtgcacgatgatcggcctcaagcc
aaatacgcgcgaaatccgccctacggagaggatgttaaatttttactcagagttgcaaag
agactcggtacgcagtacatgcatcagctttgcatttgtgctgtgaacagcattgttagt
ccttttgttcttcatcatgtcgctctggaagcggcccaatatctcgctaggaacaatcca
gcgttcatcgtgcatcatctgagatctgccttgttggctcctctagtacacaagtgccaa
caaatgtatattcaatgcatgcatcaaaaattgtatcatttaacagctggcgattatgaa
gaatttgcaagcattgtttgcgcggcaagggctgcctttcaaattaatcccgaaggaaat
actcaattcaaagagtggttacaatcgatcaaaagatctcagtcgtgtaataaagatctg
tgggcacaaatcaacgcggcgttacaacagaccggcaaatga
DBGET
integrated database retrieval system
