Camponotus floridanus (Florida carpenter ant): 105254526
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Entry
105254526 CDS
T03919
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105254526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfo03021
]
105254526
03036 Chromosome and associated proteins [BR:
cfo03036
]
105254526
Transcription machinery [BR:
cfo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105254526
Chromosome and associated proteins [BR:
cfo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105254526
PBAF complex
105254526
GBAF(ncBAF) complex
105254526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
105254526
NCBI-ProteinID:
XP_011261574
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MLSLGPKKDGGPNAKFFEAQEILTQLDGVKQWLLKNCKKYVQTDPPTNKSLATLVVQLLQ
FQEDNLGKNVSKPPMTRLPMKCFLDFKPGGGVCHILATAYRFKQEQGWRRFDFPGGKSGS
RMDRTVDMLMAAERVLIQNRCMTVPSVFVRPDVDKNTAAKVKEIVRKHQGTVVENEADAS
HIIYPPVDPMEEEYARPCMRRERSVLIHWYYFPDSYDSWSTLDLPWDYPEGTYTNTNSRS
VYKVSATWALDLDQYNEWMNEEDYEVDDNGQKRVHKYRLSVEDLMAQPSHPPPAKKPKRK
RSPSPPPKLGKRKSSRAPSGIQSASASSATVPKKSRGGDEEEDLTQGMEDPPAEPRIVEV
VATPTNLPITGQGNSTTGNSTLASTGSKKQDSELQPLKSGNLTDLDEQMEGDKGSSQGGQ
DREERDTSKERGEGGKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFFNGK
NKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQ
VDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKMLLDLEKKPVVGTVP
EEKVAAGAMANFGLKIDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDDWNKV
CEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVAFLAS
VVDPRVAASAAKAAMEEFAAIKDQVPAALLDQHLRNVQASANSDGKFDPAAGLAQSGIAG
TGPPEPPDDTASAATPTTGHVSSPHSAVPTSEAKKEEPEKPKDAMDVEPSQVDIGKKEDE
SKENEEDAKSTTDPEAAEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVEERKIKS
LVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRA
RQQAHQRLAQEQQQQQQQQNQQHPPWQPPGAQQQQQQPPSPQSQAQQPPPHTPPQQT
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgttagggccgaaaaaggacggtggacccaacgccaagttcttcgaggcgcag
gaaattcttacccagcttgatggtgtgaaacagtggcttctcaagaattgcaaaaagtac
gtgcaaacggatccacccaccaataagagtttagctacattagtggtgcagcttctgcaa
tttcaggaagataatctaggaaaaaatgtatcaaagccacctatgaccaggcttccgatg
aaatgtttcttagattttaaacctggtggtggtgtgtgtcatatattagccactgcatat
cgtttcaagcaggagcaaggatggcggcgtttcgatttccctggtggaaaatcaggatcg
cgtatggaccgtacagtagatatgctgatggcagcggaacgtgttttaatacagaataga
tgtatgactgtaccaagtgtttttgtgagaccggatgttgataaaaacacagctgcaaaa
gtcaaagaaatagttagaaagcatcagggaactgttgttgaaaatgaagcagatgcttca
catattatctatcctccagtggatccaatggaagaagaatatgcgcgtccttgtatgaga
cgcgaaagatcggttctaattcattggtactactttccagacagttatgattcctggtca
acattagatcttccatgggattatcctgaaggaacttacacaaatacaaattcaaggtca
gtgtacaaagtatcggctacatgggctctagatttggatcaatataacgagtggatgaat
gaggaagattacgaggtagatgataatggtcagaaaagagtacacaagtacagactctct
gtagaagatttgatggcacagccatctcatccgccacccgcaaagaaacctaagagaaaa
cgatcacccagcccacctccaaagctcggaaaacgtaaaagtagcagagctccatcgggt
attcaaagcgcgtccgcgtcatcggcaacagttccgaagaaatcacgcggcggcgacgaa
gaggaagatttaactcagggaatggaggatccaccagccgagcctcgcatcgttgaagta
gttgctacacccacgaatctaccaattacaggccagggtaattcaacaacaggaaattct
actttggcatctactggtagtaaaaagcaagatagcgagcttcaacctctcaaatccggc
aatttgaccgatcttgatgaacaaatggaaggagacaaaggtagttctcaaggaggccaa
gacagagaagagagagatactagtaaagaaaggggtgaaggtggcaaaggcgatgaaccg
gaagataatgtgacagagcagacacatcacattgttgttcctagttattctgcctggttc
gattataactcgattcacactatcgagaagagagctctgtcggaatttttcaatggtaaa
aataaatccaaaactccagaaatctatcttgcatataggaattttatgattgatacctat
cgactaaatccaacggaatatattacatcgaccgcttgcaggcggaatttagccggagat
gtatgcgctattatgcgtgttcacgcgttcttggagcaatggggactcatcaattatcaa
gtagacgcggaatctagaccaacgcccatgggacctccgcctacgtcgcatttccatgtt
ctgtcagatacgccgtccggtttggcaccagttaatccaaatccaccgaaaacaccacag
ccgtccgccgcgaagatgttgcttgatctggagaaaaaacctgtggtcgggacggtcccg
gaggaaaaagttgcggcaggtgcgatggcgaattttggtctgaagatcgatcagtattcg
agaaaaccggcggttctgaagaataagcaagcggcgggcgctacacgcgattggacagaa
caagagacgcttctgctattggagggattggaactgcataaggacgactggaacaaagta
tgcgaacatgtgggttcgagaacacaggacgaatgtatcttgcacttcttacgtctacct
atagaggatccgtatctggaggaaggtggacctgagggattgggacctttggcttatcaa
ccagtacccttttcgaaagctggtaatcctgtcatgagcacggttgcttttcttgcatcg
gtcgttgatcctagagtagcagcgagcgcggcaaaggctgccatggaagagtttgctgcg
ataaaggaccaagtgccagcagcattgttggatcagcatttaagaaacgtccaagctagc
gctaattcagacggtaaatttgatccagcagcaggcttggcacaatcaggcatcgctggt
acagggccacccgaaccgcctgatgacacagcatctgctgcgactcctacgacaggtcac
gttagctcgcctcactctgcagtgccaacttctgaagcaaagaaagaagaaccagagaaa
cctaaagacgcaatggacgttgaaccatctcaggtggacattgggaaaaaggaagacgaa
tcgaaagagaatgaagaagatgcaaagtccaccaccgatccagaagctgcggaagcgaag
gaaaagaaagataaggttgtaagagatgctcagcttcaatccgcggcagcagcggcgcta
gcggctgcagctgttaaagctaaacatttggcagctgtagaggaacgcaagataaaatca
ttagtcgcattactagttgaaacgcagatgaagaagctagagatcaaattgcgtcacttc
gaggaattagaaactacgatggagcgcgagcgcgaaggtctcgaatatcagcggcagcag
cttatcactgagcgacaacagttccatttggagcagttgaaggcggccgagtttagggcg
cggcagcaggctcaccagcgattggctcaagagcaacagcaacaacaacaacaacagaat
caacagcatccaccttggcaaccacctggcgcgcaacagcagcaacagcaacctccgagt
ccgcagtctcaagcacaacagccgccaccgcatacaccgccgcaacagacataa
DBGET
integrated database retrieval system
