Camponotus floridanus (Florida carpenter ant): 105254812
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Entry
105254812 CDS
T03919
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03013
Nucleocytoplasmic transport
cfo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105254812
03015 mRNA surveillance pathway
105254812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105254812
03041 Spliceosome [BR:
cfo03041
]
105254812
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105254812
Spliceosome [BR:
cfo03041
]
Complex C
Other components
EJC/TREX
105254812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
105254812
NCBI-ProteinID:
XP_011262027
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MRKLDLEIWGAERIEAQLEAARDGLRGLDRNIRKILGRDLPDGESGPLQPSRISQKRPLQ
EDRRRAVTDFVNNELPGSKRRWQSSNVEPKTVFSRLSARVPSNADDSADEDDSIIKPAVS
SRVIATPREIPSRQEVIRRERTDERSRQRNKRMFGALLGTLQKFRQEETKLKAKEDKKAE
VEARVEEARKREKEELRRERQQLFLSRKRQLAEVRALEAKLARSRQFQDWRNAQLSLASF
IKTRAQPSIYYIPKRKHPQTDILLVQSTKELYEEIERREKALIEELNLIEMQIGLGKNSQ
NFEASTSLHIVETSRSIEEGEENRDPNPELIEAAIIDNADVSIQSIINENFDDNDMEKKE
EIQLNQVQSDENNG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaattggatttagaaatatggggagccgaaagaatagaagctcaattggaagct
gctcgcgatggacttcgcggtctggatcgcaatattcgtaaaattctcggacgagatctc
cctgacggcgaaagtggtccgctgcaaccatctagaatatctcaaaaacgaccattacaa
gaagatcgtcgacgagctgtaacagattttgtgaataatgaattacctggaagcaaaaga
cgatggcaaagttccaatgtagagccaaaaacagttttcagtagattaagcgcacgagtt
ccctctaatgctgacgatagtgccgatgaagatgatagcattattaagcctgctgtatca
tccagagtaatagctactcctcgagaaattccttcacgtcaggaagttatcagacgggaa
agaacagatgaacgtagtcgacaaagaaataaacgtatgtttggtgcacttttgggtact
ttacaaaagtttagacaagaagagaccaaacttaaggcaaaggaagataaaaaagcagaa
gttgaggccagagtagaagaagctagaaaacgagaaaaagaagagctacgaagagaaagg
caacaattgtttttgtcacggaaacgacaattagctgaagtacgagcattggaagcaaaa
cttgcacgtagtcggcagtttcaggattggcgcaatgcacagttatctcttgcttcattt
ataaaaacacgtgcacaaccttccatttattatataccaaagcgcaaacatccacagaca
gatatattattagtgcaatccacaaaagaactttatgaggaaattgaaagaagggaaaaa
gcattgatagaagaattaaatttaatagagatgcagataggattaggtaaaaactcacaa
aattttgaagcgtctacatctttacatatagtagaaacttcgcgctcgatagaagaaggt
gaagaaaatcgagatcctaatccagaacttattgaagctgcaatcattgataatgctgat
gtctcgatacaatctataataaatgaaaattttgatgataatgatatggagaaaaaagaa
gagatacaattaaaccaagttcaatcagatgaaaataatgggtag
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