Camponotus floridanus (Florida carpenter ant): 105254938
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Entry
105254938 CDS
T03919
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105254938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105254938
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105254938
mRNA cycle factors
Common to processing body (P body) and stress granule
105254938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_8
Motif
Other DBs
NCBI-GeneID:
105254938
NCBI-ProteinID:
XP_011262214
UniProt:
E2AQH5
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MGLKAAVQALKKAEPLKDKVQRCKDLLNDNDAWVCQQQLQKIYQQVLILDLEYALDRKVE
QELWNLGFKNYIATLQSQAKDRKNPKRGESQALLSWCLEAASGFYLTLLQEICTVFDLDL
PFRRKGYVYGCTSPWKAVEKLSPPHKSSCFYACQYCLVHLGDIARYRNESKQAEMFYRHA
VSLSPSSGQPYNQLALLEASRGDKLGTVFHYTRSVAVKHPFPVAMANLATTLSSALNDKS
FNIDGKTKLNSQEYIAVFLKLHGIIHNFGDLKLACLYSKQLTETLTALVATESFSPWMLI
QMLVINLYALQHATGVGTDSTELLKNEQLTNDEKLARDCILDLIAGTLSALLLPVYTIKN
SIIEYFALPSIKLCLDWINIKPMVLEEVAFTSRLQIWPSLCVLLNALQNCVVDFKHDEYA
VVPLPEDRDLQGFLPLEKSFENLRFTNTALEGDIITLNKLRAVRILHLGRCLAQNRINGS
APISITTEEKTGDSRFTSTSNGVGPSNELMKELEELSLNKELKQLNTSMSPVLSEAASSS
KSSVETDIEISADKKIFQGILKPQGSLERNRDSISNVMETSSAEACSSLSCARKPRQNIA
MQAIMRRAETEQKQVTFKNVSPVIVEEENDKKAKATIVPPTISTSMASKPTPILEMPKAN
EVSNINNTLVSASNRLSTMPLVSSASSQNQSVLVQGQQRPVKLSPNIPMPTQLMVVEEQP
TQQIAQQVAQQMLPQIHTSGMTTGQQTSTLGPVCYSNQPFNAQNPQFANNFMTSRPPLTP
NAPHYQLQGQLSTNGQPVSTIPQSINGIHHSINQSRPLHQRMPQNVSHSPAQLLQQNLRL
GSPAQPSMLPQNMNLPANNMGLQANIKVEQNHAIGLQQQQQNMIPSNSRSNSMHNQLNMN
GSSSMANVSTMMSTLSVYEKDPQQPQGLTTLVNSQSPTSGSNFQLNFNQNHFNQNQTFVG
QGSLSQNQPSPSFYKNNPDAMDFQFPNQTKIVNKNQQSQQQPVTNNYNMFCNYEPTEHFN
LWRDNRPPQPPITWWGAAGNTAAQMHMKDTTVNDNAFSKWSDSSALGSIANRVPLTPGKN
YQQQQQNGQHSRHLMTGNNFEDSRFELDQKPSQSVNTGNTYSLFSSNTWSTVTPINTNST
GQDQMKARLHQQSLWSGPGPSPLERLLEQQKSLREGGTT
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgggcctaaaggcagccgttcaggctctgaagaaagcggaaccactgaaagataaagtc
caacgctgcaaggatttgttgaacgacaatgacgcctgggtatgtcagcagcagttgcag
aaaatataccaacaggtcctcatactggatttggaatatgccctcgacaggaaagtcgag
caagagctgtggaatcttggatttaagaactatatagcgactctgcagtcgcaagccaag
gacaggaagaatcccaagcgcggcgaatcgcaagcattgctcagttggtgcttagaagca
gctagcggcttttatttgaccctgttgcaggaaatttgcactgtgtttgatttggatcta
ccatttagaaggaagggttacgtatatgggtgtacatccccgtggaaggctgttgaaaaa
ttatctccacctcacaaatcatcttgtttttatgcttgccaatattgccttgtacatctg
ggtgacattgcacgatatagaaatgaaagcaagcaagctgaaatgttttatagacatgcc
gtttcgttgtcaccatccagcggacaaccttacaatcaattggcattgctagaagcatcc
cgcggtgacaaattgggaacagtgtttcattatacacgttcggtagctgttaagcatccc
tttcccgtcgccatggccaatcttgccacgactctgtcctccgccttgaacgacaaatct
ttcaatatcgacggcaagaccaaattgaactctcaggagtatattgctgtctttctaaaa
ctgcatggaataattcacaattttggcgatttgaagcttgcatgtttatacagtaaacaa
ttgacagaaacgttaacggcgttagtcgccaccgagagtttcagtccatggatgctgata
cagatgttggtaatcaatctatatgctttgcaacacgcgactggagttggcaccgatagc
acagaattgctcaagaacgagcaattgaccaatgatgaaaaactggcccgtgactgtata
ttggacctaatcgcaggcactctgtctgctttactgttacccgtttatacgataaagaac
tctatcatcgagtactttgcattgccttctataaaactgtgccttgattggatcaacata
aaacccatggttttggaggaagttgcttttacgtcgagattacagatatggcccagcctc
tgtgtgcttttgaatgctctgcagaattgtgtagtggattttaagcacgacgaatatgct
gtagtgccactgccagaagatcgcgaccttcagggtttcttaccattggaaaagagtttc
gagaatctcagatttacgaatactgcgctagaaggcgacatcataacattaaacaaattg
cgggccgtacgtattctgcatctgggccgttgtctcgctcagaatcgaatcaatgggtct
gcgccaatttcgattacgacggaggagaaaacgggcgatagcagattcacgtccacgagc
aatggcgttggacccagcaacgaattgatgaaagaactcgaggaacttagcctgaacaaa
gaattgaaacaattgaacacttcgatgagcccggtactatctgaggcagctagtagcagc
aaaagttctgtggaaactgatatcgagatttctgcagataagaaaatttttcagggtatc
cttaagccccagggttctttagaacgaaatcgagactctatatcgaacgtcatggaaacg
agtagcgctgaggcgtgttcttctctttcgtgcgcaagaaaaccgcgacaaaatatagca
atgcaagcgattatgcgtcgcgcggagactgagcaaaagcaggtgacattcaagaatgtg
tcacccgtgattgtcgaagaagaaaatgataagaaagcgaaagcaacgattgttccaccg
actatcagtacttcgatggcgagtaagccgacaccgattctagaaatgcctaaagctaat
gaggtttccaatataaacaacactcttgttagcgcttcgaatcggctgtcaacaatgccg
ctcgtctcgtccgccagttcacaaaaccagtccgtgttggttcagggtcagcagagaccc
gtcaagttgtcgccgaacatccccatgcccactcaattgatggtagtcgaggaacaacca
actcagcaaattgctcagcaagttgctcagcaaatgcttccacaaatacacaccagtggt
atgacgacgggtcaacagacctcgacgttgggaccggtttgctattcgaatcaaccgttt
aatgcgcagaatccccagtttgccaataactttatgacgagtcgaccgccgctgacgcct
aatgcgccacattatcagctacagggacaacttagtactaatggacaaccggtttcaacg
ataccgcagagcatcaacgggatacatcattcgatcaatcagagcagaccgttacatcag
aggatgccgcagaacgtgtcccatagccctgcgcaattgttgcagcaaaacttgcgattg
ggttcgcctgctcaaccgagcatgttaccacaaaatatgaatctaccggcaaataatatg
gggctacaagcgaacataaaggtggaacagaatcacgctatcggattgcaacagcagcag
caaaacatgataccaagcaattccagatcgaatagcatgcataatcaattgaatatgaac
ggcagttcaagcatggcaaatgtatcgacgatgatgtcgaccttgtccgtatacgaaaag
gatcctcagcaacctcagggtttaacaacgctggtcaattcgcaaagtccaacgagcgga
tctaactttcagcttaatttcaatcagaaccactttaatcaaaatcaaactttcgtcggc
cagggttcattgtcgcaaaatcagccatcgccgtcgttttataaaaataatcccgacgcg
atggattttcaatttcccaatcagactaagatagttaacaagaatcaacaatcgcagcag
caaccagtgacgaataattataacatgttttgcaattacgagccgacggagcattttaac
ttgtggagggacaatcgaccgccccaaccgccgatcacctggtggggtgcagctggtaat
accgcggctcagatgcatatgaaggataccactgttaacgataatgcattttcgaaatgg
agcgactcgtctgccctcggaagtatagcaaatagagtgccactgacgcctggtaaaaat
tatcagcaacaacaacaaaacggacaacacagcagacatctgatgacaggaaataatttc
gaggattctagatttgaactcgaccagaagccgtcccaatccgtgaataccggcaatact
tattccttgttcagcagcaacacatggagcaccgttacgccgatcaatacgaattcgacc
ggtcaagaccaaatgaaggcacgattgcatcagcagtctctatggtctggaccaggtcct
tccccgttagagcgacttctggagcaacaaaaatcgctacgcgaaggcgggaccacttga
DBGET
integrated database retrieval system
