KEGG   Camponotus floridanus (Florida carpenter ant): 105254942
Entry
105254942         CDS       T03919                                 
Name
(RefSeq) probable histone-binding protein Caf1
  KO
K10752  histone-binding protein RBBP4
Organism
cfo  Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03082  ATP-dependent chromatin remodeling
cfo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cfo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105254942
   03083 Polycomb repressive complex
    105254942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cfo03036]
    105254942
Chromosome and associated proteins [BR:cfo03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     105254942
  Histone modification proteins
   HAT complexes
    HATB complex
     105254942
   HDAC complexes
    Sin3A-HDAC complex
     105254942
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     105254942
    PRC2.2
     105254942
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     105254942
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105254942
  Chromatin remodeling factors
   NuRD complex
    105254942
   NuRF complex
    105254942
   NuRF complex (fruit fly)
    105254942
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 WD40_WDHD1_1st EIF3I Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_WDR19_1st ANAPC4_WD40 eIF2A Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 MIOS_WD40 Beta-prop_IFT122_1st PEP5_VPS11_N Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 105254942
NCBI-ProteinID: XP_025270135
LinkDB
Position
Unknown
AA seq 428 aa
MMTDKDGEGFDDAVEERIINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEG
KDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIE
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK
EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDVAWHLL
HESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSSED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPG
SEIETGGS
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgatgacggacaaggacggcgagggttttgacgatgcagtagaagaacgtattattaat
gaggaatacaaaatatggaagaaaaacacaccattcctatacgatcttgtgatgacacat
gctctggaatggccttctttgacggctcaatggctaccagatgttactcgacctgaagga
aaggattattcggttcatagattaattctcggcactcatacttcggatgaacagaatcac
ttgctcattgctagtgtccaactaccgaatgaagatgcgcaattcgatgcttctcattat
gacaatgagaagggcgagtttggtggatttggttctgtgagcgggaaaatcgaaattgaa
ataaagattaatcatgagggtgaagtcaacagagcgcgatacatgccgcaaaatccatgt
gtaattgcaacaaagactccctcaagcgatgtacttgtattcgattacaccaaacatcca
agtaaaccagatcctaatggagaatgccatccagatttaagattgcgagggcatcaaaag
gaaggctatggtctctcatggaatccaaacctcaatggatatttactcagtgcatctgat
gatcatactatttgtctgtgggacattaatgccacaccaaaggagaatcgcgttatcgat
gcgaaaactatcttcacaggacacacagcagtggtcgaggacgtagcttggcatttatta
catgaatcattatttggttcagttgctgatgatcagaagctcatgatttgggatactaga
tgcaacaacactagtaaaccaagccacactgttgatgctcataccgctgaggtgaattgt
cttagtttcaatccatattctgaatttatattagccactggtagtgcagacaaaactgta
gcattgtgggacttgcggaatttaaaattgaaattacattcgtttgaatcacacaaagat
gagatctttcaagttcaatggtcgccacataacgagacaatattggcaagtagtggcaca
gacagacgattacatgtttgggatcttagtaaaatcggtgaagaacaatccagtgaggat
gctgaagatggaccgcctgaacttctgttcatacatggaggtcatactgcaaagattagt
gatttttcatggaatccaaatgaaccatgggttatatgctcggtatcggaggataacata
atgcaagtatggcaaatggcagaaaatatttacaacgacgaagaacctgaaacaccgggc
agcgaaatcgaaactggtggttcataa

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