Camponotus floridanus (Florida carpenter ant): 105254991
Help
Entry
105254991 CDS
T03919
Name
(RefSeq) PDZ domain-containing protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfo04121
]
105254991
Enzymes [BR:
cfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105254991
Ubiquitin system [BR:
cfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
105254991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
DUF4853
Asp
Motif
Other DBs
NCBI-GeneID:
105254991
NCBI-ProteinID:
XP_025263458
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MDFVILKVNGQDVSNSSHEDAVRCFQSAQEPIIVEVLRRQPGKHQQVPHTPSKEHERITC
QDKNEGTTNGKGPIDERPCTDDVKKDTACPLVSTAVQTDWAGLMEEEEELLPVPLVVEEQ
ANDSFEDFLAHDIDFEEVTLRKSGSAEKLGLTVCYSSGSGSEDADTEVYISEIVPESLAA
RDGRLREGDQILRVNGRDVANKEQTENLFAETKTAVTILVSRCVYQDDEYDDRRIYHQGS
PPLSPENLPAYQNSMIEQLIRQQQQQTEERTKETEINNCTLKAAPPIPSHTQQQQQQQQQ
QPIFSTNSSSTCSSQNSQNSQKSSGKNATSPAHHTEERSKQWMQDSLKDCSKRLEGISLR
SQQPGPPPPPPTVSAPPTVKLVEAYSSHVWSDTEHIYETIPESDSEPIYSSPYEHHQHWT
QQSNHVTTQLQHSSGATQNHLSASGQQNQKWSSSKSNSSGEEKDSSSAYNTGESCHSNPL
TLELQQGERDHHKSTLVLCPPPKTPQQQQKLGCNCPMPVTPTATTATIRQSSKNQSVRKS
SSSSSHHHKDRNELSMNANTLPADTMYTNVANLQQTMMLQQQLFKQALNRKNSTTSKEIS
AGGARKSKSHGNFQAPNLTQYQFVGSQQVCTSTWTPPEDKGEVQMEWKVKRRADGTRYIA
RRPVRNRILRNRAIKICEERAGHTTEDDAMSEMKVSVATIDTDQVGRYWSKEERKRQLER
ARERKQRQQELMLQQQQQQMQQTNDLLICEHTEDKGSKKPLSIVELSHKKMARKKNTLDD
FTTVQEMLVHGNRVGASGPGTGGKLMGLLSVTTV
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgtaatattgaaggtgaacggacaagacgtttccaattctagtcacgaggat
gctgtacgttgctttcaatcggctcaggagccaattatcgtcgaagttcttcgacgacaa
cctggcaagcatcaacaggttcctcacacaccctccaaggaacacgaaaggatcacatgt
caggataagaatgagggaacgacgaacgggaagggtccgatagacgagcgtccgtgcacc
gacgatgtcaaaaaggacacggcgtgtcctttggtgtcgactgcggtccaaacggactgg
gctggtcttatggaggaggaggaagagttgttgccggttcccctcgtggtcgaggaacaa
gcgaatgatagtttcgaggactttctcgctcatgacatcgactttgaggaggtgacgttg
cggaaaagcggaagtgccgagaagctcggactgaccgtgtgctatagctccggttccggt
agcgaggacgctgacacagaggtttatatctcggaaatagttcctgaaagtcttgcagcc
cgggacggtcggttgcgagaaggagatcaaatcttgcgggtcaacggcagggacgtcgcg
aataaggagcaaaccgagaacttgttcgcggagacaaaaactgcagtgacaattctcgtc
agccgatgtgtatatcaagacgacgaatacgatgacaggcgcatctatcaccaaggatcg
ccgccgctttcacctgagaatctaccagcgtatcagaacagcatgatcgagcagctgatc
cgtcaacaacagcagcaaacggaggaacgtaccaaagaaaccgaaataaacaactgcacc
ttaaaagcggctccacctataccttctcacacacagcaacagcagcaacagcaacagcaa
cagcccatcttctccacaaactcctcgtccacatgttcgtcacaaaattcacaaaactcg
caaaagtcaagcggcaagaatgcgacttcgccggcgcatcatacggaggaacgtagcaag
caatggatgcaggactcgttgaaggattgctccaagaggctcgagggtatctcactacgc
agccaacaacctggaccgccaccgccgccgccaacagtgtcggcaccgccgacagtgaag
ctcgtcgaagcttactcgagccatgtctggagcgacacagaacacatctatgagacgata
ccagagtcggacagcgagccaatttactcatcgccatacgaacatcaccagcattggacg
cagcagtcgaaccacgtgacgacacaattgcagcacagcagtggcgcgacacagaatcac
ctgtctgccagcggtcagcagaatcaaaagtggtcctcttcaaagagcaatagttccggc
gaggagaaggacagctcgagcgcgtacaacactggcgaatcctgtcatagcaatcctctg
actttggagcttcagcagggcgagagagatcatcacaagagtacgttggtgttgtgtcca
ccgccgaagacaccgcagcagcaacagaagctgggctgcaattgtcccatgccggtgacg
ccgaccgcgacaaccgcaacgatcaggcaatcgtcgaagaatcagagtgtgagaaagagc
tcgtcatcgtcctcgcatcatcacaaagatcgtaacgaactgtcgatgaacgccaacacg
ctgccagccgataccatgtatacgaacgtggcaaatctgcaacagacaatgatgttgcag
cagcagctgttcaagcaggcgctcaatcgaaagaactctacgacgtctaaggagatatca
gcgggtggtgcgagaaagtccaagtcgcacggcaacttccaagcgccgaatctcacgcag
taccaatttgtcggcagtcagcaggtgtgcacgtccacatggacaccgccggaggacaaa
ggcgaggtgcagatggagtggaaagtgaagagaagagcggatgggacgaggtacatcgcc
agaagacctgtgagaaatcggatactacggaatagggcgatcaagatatgcgaggagagg
gctggtcacaccacggaggacgatgccatgtcggagatgaaggtgagcgtcgctacgatt
gatacggatcaggtcggacgatattggagcaaggaggagcgcaaacgacagctggaacgt
gcgcgcgaacgcaagcaacgtcagcaggaactgatgctgcaacagcaacagcaacaaatg
caacaaaccaacgatctactgatatgcgaacatacagaggacaaagggtcgaagaagccg
ttaagcatcgtggagctcagtcacaagaaaatggcgcgtaaaaagaataccctggacgac
ttcaccaccgtgcaagaaatgttggttcacggaaacagggtgggagcaagcggtcccggg
acggggggaaaattaatgggtctactgtcggttaccacggtataa
DBGET
integrated database retrieval system
