Camponotus floridanus (Florida carpenter ant): 105255387
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Entry
105255387 CDS
T03919
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfo03041
]
105255387
03016 Transfer RNA biogenesis [BR:
cfo03016
]
105255387
Enzymes [BR:
cfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105255387
Spliceosome [BR:
cfo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105255387
Transfer RNA biogenesis [BR:
cfo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
105255387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
105255387
NCBI-ProteinID:
XP_011262947
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MTAFEEMGVLPEIAKAVDEIDWTLPTDVQSEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDLESGKGGAAVAQAQQPTHWGLSLFDRGRALAVTPDGLRCQSREQKEWHGC
RANKGISGNGKYFFEAIVTDEGLCRVGWSTSQASLDLGTDKFGYGFGGTGKKSNAKQFDN
YGEAFGMHDVIGCFLDLTRGEIKFSKNGVDLGVAFTLNAQQKSQTYYPAVVLKNAEMAFN
FGAQPFKHSPPNDYVAVSSASKESVKCNPVSSNQNQSKGSDKPTNNAPQAIIIEPSRELA
EQTYNQIQKFKTHVKNPTVRELLVIGGVNVKEQIAVLNSGVDIVVGTPGRLEDLIQGGYL
LLTHCRFFVLDEADGLLKQGYTELIDRLHKQIPKITSDGKRLQMIVCSATLHAFEVKKMA
ERLMHFPTWVDLKGEDAVPETVHHVVVMVDPQKDKSWYNLRNHLETDGVHARDNVRPGNS
TAETLSEAVKMLKGEYCIRAIKEHRMDRALIFCRTKLDCDNLERYLKQAGGQQFSCVCLH
GDRKPGERKANLEKFKRQEVKFLICTDVAARGLDITGLPFMINITLPDEKSNYVHRIGRV
GRAERMGLAISLVSSVPEKVWYHGEWCPSRGRNCQNTSLTNQGGCCTWYNEPQYLAEIED
HLNVTIQQVDPDIKVPLNDFDGKVTYGEKRMAMGSNYENHVQQMAPIVAELAALESRAQI
AFLKTHIAER
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgactgccttcgaagaaatgggtgttttgccagagatagcaaaggcagttgatgagata
gactggacattgccaaccgatgttcaatctgaggccattccacttattctgggcggtgga
gatgtactgatggctgcggaaactggtagcggaaaaactggcgccttctgtttgcccatt
ttacaaatagtctgggagactctcaaagatttggagtctggaaaaggaggtgcagctgtc
gcacaggctcaacaaccaacacattggggattgagcctatttgatagaggacgagccttg
gcagtaacaccggatggtttaagatgccagagtagagagcaaaaagagtggcatgggtgt
cgtgcaaataaagggatttcaggaaatggcaagtacttttttgaggccatagttaccgac
gaaggtttatgccgagttggttggtctacatcacaggcctctttggatttaggaacagat
aaattcggctatggattcggtggtactggaaagaaatcgaatgcaaagcagtttgacaac
tatggggaggcctttgggatgcacgatgtgatcggatgctttctcgacttgacgaggggt
gaaataaagttttccaaaaacggcgtggacttgggcgtcgcgtttacattaaacgcgcag
caaaagtcgcagacttattatccagctgtcgtattaaaaaatgccgagatggccttcaat
tttggagcgcagccatttaagcactcgcctccaaatgattatgtggccgtatcatccgct
tcgaaggaatccgtcaaatgtaatccagtcagcagcaatcagaaccaatcaaagggtagc
gataaaccgacaaacaatgcaccccaagcaatcattatagaaccttcccgcgaattagct
gaacaaacctacaatcaaattcaaaagttcaaaacacacgtgaaaaatccaacggttaga
gaattactcgttatcggtggcgtaaacgtgaaagaacagattgccgtcttaaattctggt
gtggatatagtcgtcgggactcctggacgtctagaggatcttatacaaggcggttacttg
ttgttgacgcattgcaggttctttgtgctggacgaagctgacggattattgaagcagggt
tacaccgaacttatcgatcgcctgcacaaacagatcccaaaaatcacgtcggacggcaag
agattgcagatgatcgtttgctcggcaacgttacacgcattcgaagttaaaaagatggcc
gaacgtttaatgcattttccaacttgggtagatctaaagggcgaagacgcagtgcccgag
actgtgcatcatgtcgtagtaatggtagatccgcaaaaggacaaatcgtggtataatctg
agaaatcatttagaaactgacggtgtacatgcgagagataacgtgagaccaggaaacagt
actgccgagacgttgtcggaggctgtaaagatgctgaagggagagtactgcattcgcgct
atcaaggaacaccggatggaccgggcattgatattctgcaggacgaaactcgattgcgat
aatctcgagagatacctgaaacaggccggtggacagcagttctcgtgtgtgtgtttgcat
ggagataggaagcccggggagcgtaaagccaatctagagaaattcaaacgtcaggaggtg
aaatttttaatttgcaccgatgtggcggccagaggattagatatcaccggcctgcctttt
atgataaacataactctgcccgatgaaaagtccaattatgtgcatcgcattggacgagtt
ggcagagctgagagaatgggtttggcaatttctttggtcagtagtgtcccggagaaggtg
tggtatcatggtgaatggtgtccttctcgtgggagaaattgtcaaaacaccagtctgact
aatcaaggtggttgctgtacgtggtataatgagcctcagtatttggcggagattgaggat
catttgaacgtgacaattcaacaagtcgacccggatataaaagtgccgctgaatgacttt
gatggaaaagttacatatggtgaaaaaagaatggcaatgggttccaattacgagaatcat
gtccaacaaatggctcctattgtggcggaattggccgcgttagaatccagagcgcagatc
gcattcctaaagactcatatagcagagcgttag
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integrated database retrieval system
