Camponotus floridanus (Florida carpenter ant): 105255664
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Entry
105255664 CDS
T03919
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo04140
Autophagy - animal
cfo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105255664
04148 Efferocytosis
105255664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfo04131
]
105255664
Membrane trafficking [BR:
cfo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105255664
Hops complex
105255664
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf_RING_Vps8
zf-C3H2C3
zf-RING_2
zf-C3HC4
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-RING_UBOX
COMP
zf-rbx1
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
105255664
NCBI-ProteinID:
XP_011263385
UniProt:
E2ASS5
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVVAPPIRPDISTAGFIQMKLQDDGPIFTKQKVNFLPSDKILHL
AVSNNISVIAMANNILLRIDMKKQSESDKIEEIDISKYALSMKISGLFLDPSGYHLLITL
VPRHGDNPPAEIYYLHRNATKLKQAGKFKGHEITAVGWNFSKTSKTTSGPILLGTSKGLI
FETEIGLENDKIFNTSLEQYWRQLPNYLPLYGTKEVGGLVFDLGKNSKPPITGIEFHKIP
NSDKYVIIVTTLMRIYQYIGAISNPEEKPLLQQVFYKYLNAQESFSEVINSLSYSKMQFY
YPSLDVLPKSFGWLTETGILYAQVDPKSDTNILINQQMLTCPETSLMGSNVSQTTSLPLS
FVLTEFHALLLYPDRVKSISLLNQELIFEDIYNDAVGKLIGITKDPATKSIWAYSEQAVF
KYKVTKEDRNVWQVYIEKGEFELAKQYCKDNPAHIDQVLIKQAEMLFKNKEYEKSALIYA
DTHSSFEEISLKFLQEWQIEALKTFLCKKLDGLKTQDKTQITMIVIWVTELFMNQMGALR
SSNTAYLHDSQYMELQKQFDSFLAIPKVEECIKRNRSTIYDLMASHGDKDNLIRLTIMHC
NYEEVIRQHLYKNNYLEALGVLKSQNNKDLFYRFAGILLQELPRPTVAVLISQGSSLKPA
KLLPALVSCNSDEKHAKEIIKYLEFCVYKQGSQEQAIHNFLLSLYARYKQDEVMRYISSQ
GQDISMVHYDVHYALRLCQEVGLTEACVQLSALLGLWATAVDLALTISVDIAKQIAAMPS
DHDDELRKKLWLKIAEHVVREKDDIQQAMKFLQHCDLVRIEDILPFFSDFVTIDHFKEAI
CNSLQEYNQHIQDLKEEMQEATKAAELIRKDIQAFRTRCTFVHARDTCNTCEVQLLLRPF
YVFPCGHKFHSDCLVAALTPMLSMDQRTKLADLQRQLTAISNRPEDTTSMTSVSLSTRDQ
IKADIDELVASECLYCGELMIESIDKPFIEEGDYERVMKEWT
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatgtttgatcagtatgagcaggcttctcagcgttccaagcaagtggttgca
ccaccgattcgtccggacattagcactgcaggttttatacaaatgaagctgcaggatgat
gggccaatattcactaagcagaaagttaactttttgccatctgataaaattcttcatttg
gctgttagtaacaacatatctgtgattgctatggctaacaatatcttgttgcgcattgat
atgaaaaaacaatcagaatctgacaaaattgaagaaattgacatatccaaatatgcattg
agcatgaaaatatctggcttgtttctggatccatcgggttatcacctgctgataactcta
gtgccaagacatggagataatccaccagcagagatatactacttgcataggaacgcaaca
aaactcaaacaggctggcaagttcaagggtcatgaaatcactgctgtgggctggaacttt
tctaaaacgtcaaaaacaacttctggtccaattttactgggcacttctaagggtctaatt
tttgaaacagaaattggattggagaatgataagatatttaatacaagtttggaacaatat
tggcgccagcttccaaattacctgcctctttatggaacaaaagaggtaggaggattggta
tttgacttaggaaaaaatagtaagcctccaatcactggaatagaatttcataaaatacct
aactcggacaaatatgtgattattgtaaccactcttatgcgcatttatcaatacattggt
gctattagtaatcccgaagagaaacctctcttgcagcaagtgttttataaatatcttaat
gcacaagagagttttagcgaagtaataaattctttgtcatattcgaaaatgcaattttac
tatccatctttggatgttttaccaaaatcgtttggatggttgacagaaactggtatccta
tatgcccaggtagacccgaaatctgatacgaatatactgattaatcagcaaatgttgacg
tgcccggaaacgagtcttatgggcagtaatgtttcgcaaaccacttcgctaccattgtct
tttgtattgacggaattccacgcattactgttatatccagatcgcgtaaagagtatatcg
cttctgaatcaagagttgatatttgaggacatttacaatgatgcggtcggcaaattaatt
ggcatcactaaggatcctgcgacgaaatcgatttgggcttatagtgagcaagccgtcttt
aaatacaaagtaacgaaagaagatagaaatgtttggcaggtgtacattgaaaagggtgag
tttgaactggccaagcaatattgtaaagataatccggcacacattgatcaagtactaatc
aaacaagcggaaatgcttttcaaaaacaaagaatatgagaagagtgctttaatatatgct
gacactcactcttcctttgaagagatctcattgaagtttttgcaggaatggcaaattgaa
gcattgaaaacatttttgtgcaagaaacttgatggtttaaagacgcaagacaagacacag
ataacaatgattgtaatttgggtgacggaattatttatgaaccaaatgggagccttgcgc
agtagcaacacagcctatcttcatgattcacagtatatggagttgcagaaacaatttgat
agctttctcgctattcccaaagtcgaggaatgcataaagagaaatcgtagtacgatatac
gatttgatggccagtcatggcgacaaggacaatctgatacgtcttacgataatgcactgc
aattacgaggaagtgattcgacaacatctgtacaagaataattatctggaggcacttggg
gtactaaaaagtcagaacaataaagatctcttctatcgattcgcggggatattgttacaa
gaattgccgcggcctacggtagctgttttaatctcacaaggatcatcgttgaagccggcg
aagcttctgccagccttagtctcgtgcaacagtgatgagaagcatgcaaaagaaattatt
aagtacttggagttttgcgtgtataaacagggctcgcaggaacaagcaattcacaatttc
ctcttatcattgtacgctcgttataagcaagacgaagtcatgcgatatataagttctcaa
ggtcaggatatcagtatggtacactacgacgtgcattacgcgttacgattgtgtcaggaa
gtaggcttgacggaagcctgtgtacaattgtcggcattactcggcttgtgggctactgct
gtagatctcgcgcttacgatcagcgtggatatcgctaagcagatcgctgccatgccttct
gatcatgatgacgaactaagaaagaaactgtggttaaaaatagcggagcatgtggtacga
gaaaaagatgatatacagcaagcaatgaaatttttgcagcactgcgatttagttaggata
gaagatattttgcctttcttctccgatttcgtcacaattgatcatttcaaggaagctatc
tgcaattctctacaggaatataatcagcatattcaagatcttaaagaggaaatgcaagaa
gccacaaaggcagcagagctaatcaggaaggatattcaagcctttagaaccagatgtacc
tttgtgcatgcaagagacacgtgcaatacatgtgaagtacaattgctattgcgacctttc
tacgtgtttccctgtggtcataaatttcacagtgattgtttagtagcggcgttaacgccg
atgttatctatggatcaaagaacgaagctggcggatcttcagcgacagctaactgcaatc
tcaaatcgacctgaagacactacatcgatgacatctgtgtctttgtctacgagagatcaa
atcaaagccgatattgatgaattggttgcttcggaatgtctctactgtggagaacttatg
atagagtcaatagacaaaccattcatcgaggagggagattacgaacgcgtgatgaaagag
tggacatga
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