Camponotus floridanus (Florida carpenter ant): 105256143
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Entry
105256143 CDS
T03919
Name
(RefSeq) PMS1 protein homolog 1-like isoform X2
KO
K10864
DNA mismatch repair protein PMS1
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfo03400
]
105256143
DNA repair and recombination proteins [BR:
cfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
105256143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
105256143
NCBI-ProteinID:
XP_011264141
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MPISALDVRTAKLITTTQIITSVYAVVKELMENALDADADNIEINLIDNGTSLIEVKDNG
HGISKADVLYVGLPSYTSKISSFEDLDTLQTFGFRGEALNALCAVAEVIIITKTEEDVVG
TSYIMNHIGQIVKHESCHRSTGTTVQAKNLFKQMPVRRQIMTDTRRANQVIKLLETLLHC
FGICKSNVRIQFRVNNNLVFTKPSLNNIKEAVNHTLGRKIMSNMEWIESKDTDFVLQLML
PSKKIQDLSEVSHPDLHYIFVNNRPIKHKSLEKLVNNIILEYFKQESHRKKVIFLVYIIL
KPIDIDVNLEPNKDTILFKDQSKVFDTVDKYMKKYYGLKSVEIVEQNVSNDISICYEDYI
LNSSKDIIDTERPMCKKRKIDAQEKVIQKHIVKEKPVHNNGYETSLHKQQNIDLIQDQQH
YKDALAHIQAPNLSDSDSNDIFPAVTSSNKMEECETLSQLPVIDLGEDFNYIEEIGSCNI
SANKSQDKLNDNEEKKQISIETWSKGHIIGLKGGTDIQSDIAIGKQSNGNLNLDRQINEI
EKSKSDTMELDKTHVDNKDLKFIKHVRSQITKENPTLTAAQTAKKITEFWKQLSSNERGY
YRDIAHNKEKEQQAKTIEERGEVNKISVEGNKSRLLQLFEKMKNTKNEKKEKLNMRTIVP
WTINRTKIITRLNFESEHIIGRLTPNLWIATICEQIWIIDIAGLINGLKIADIDTDKIDA
KRIECLLKQWLSKRDDMSVMHSIYEFTRKL
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgccgatttctgcgttagatgtaagaacagcgaaattaattactactacgcagataata
acctccgtgtatgctgtggtcaaagaattgatggaaaacgcgctcgatgccgatgcagac
aatattgagatcaatcttatagataacggtacatctttaatagaagtgaaggataatggt
catggcatatctaaagcagatgtattatacgtaggattaccttcctatacatcaaaaata
tcaagtttcgaagatctcgacacgttacaaacatttggatttaggggagaagctctgaat
gcattatgcgcagtagcggaagttatcattataacaaaaacggaagaagatgttgttggg
acttcatatataatgaatcatattggacaaattgtaaaacatgaatcttgtcacagaagt
actggaactactgtgcaagcaaaaaatttatttaaacaaatgcctgtaaggagacaaata
atgaccgatacgagaagagctaatcaagttattaaattattggagacactattacattgc
tttgggatatgtaaatcaaatgtacgcattcagtttagggtgaacaataatcttgtattt
actaaaccaagtctaaataacattaaagaagctgtgaatcatacacttggtagaaaaatt
atgtcgaatatggaatggatcgagtccaaggatacagattttgttttgcaattaatgtta
ccttcaaaaaagatacaggatttatcggaagtttctcatcctgatttacattacattttt
gtaaataatagacccattaagcataaaagtcttgaaaagctagtaaataatataatatta
gaatattttaaacaagagtcacataggaaaaaggtgatatttcttgtgtatattattttg
aaaccaatagatattgatgttaatctggagccaaataaagatacaattctttttaaagat
cagagtaaagtatttgatactgtagataaatacatgaaaaaatattatggacttaaatct
gtggagattgttgaacaaaatgtgtctaatgacatatccatctgttatgaagattatata
cttaattcaagtaaggatattatcgatactgagcggcctatgtgtaaaaagcgaaaaata
gatgctcaagagaaagttatacaaaaacatatcgtcaaagaaaagccagtgcacaataat
ggatatgaaacatctctacataaacaacagaatatcgatctcattcaagatcaacagcat
tacaaagatgcattagctcatatacaagcgccaaatttaagtgactctgattcaaatgat
attttccctgctgtaacttcgtccaataaaatggaagaatgtgaaactttgagccagtta
cctgttatagatcttggagaagattttaattatatagaagagattggaagctgtaatata
tctgcaaataagagtcaggataaattaaatgataatgaagaaaagaaacaaatttcaata
gagacatggagtaaaggacatatcattggtctcaagggaggtacagatatacaatctgat
attgctattggaaaacaatccaatggtaacttaaatttagaccgtcagattaatgagata
gaaaaatcgaaatcagatacaatggaattggataaaacacatgttgataataaagatctt
aaatttataaaacatgttagatcgcaaattacaaaagaaaatcctacattaacagcagct
caaactgcaaaaaaaattactgaattctggaaacaactatcatccaatgagcgtggttat
tatcgagatattgctcataacaaagaaaaagaacagcaggctaaaacaattgaagaaaga
ggtgaagtgaataaaataagtgtagaaggaaataaaagtaggctcttacagctgtttgaa
aaaatgaagaatacaaaaaacgaaaagaaagagaaattaaatatgagaacaatagtacct
tggactattaatagaactaagataattacaagattaaattttgaaagtgaacatataata
ggtcgtttgacacctaacttatggattgctacgatttgtgaacaaatatggatcatagat
attgctggcttgatcaatggtttgaaaattgctgatattgatacagataagattgatgcc
aagagaattgaatgtcttctcaaacaatggttatcgaaacgagacgatatgtcagtgatg
cattctatatacgaatttacaagaaaactgtaa
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