Camponotus floridanus (Florida carpenter ant): 105256382
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Entry
105256382 CDS
T03919
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03030
DNA replication
cfo03420
Nucleotide excision repair
cfo03430
Mismatch repair
cfo03440
Homologous recombination
cfo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105256382
03420 Nucleotide excision repair
105256382
03430 Mismatch repair
105256382
03440 Homologous recombination
105256382
03460 Fanconi anemia pathway
105256382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfo03000
]
105256382
03032 DNA replication proteins [BR:
cfo03032
]
105256382
03400 DNA repair and recombination proteins [BR:
cfo03400
]
105256382
Transcription factors [BR:
cfo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105256382
DNA replication proteins [BR:
cfo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105256382
DNA repair and recombination proteins [BR:
cfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105256382
MMR (mismatch excision repair)
105256382
DSBR (double strand breaks repair)
HR (homologous recombination)
105256382
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
POT1
CDC24_OB3
RADX
Lin-15B
Motif
Other DBs
NCBI-GeneID:
105256382
NCBI-ProteinID:
XP_011264532
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MMSANMYGLTEGALEKIMKGVDVDKPVFQMLGYKKLPNKDGTIGNDRYRLLVSDGKNMNS
FTMLATQLNHLIENNILTEYAICKVSNYHLSSVNSGGKEKRVILIMGIEVTTPGSKVGCK
LGNPTNIESKSEADSTTADKSTGQTTGRYQTNGTAQRSNSNNYGSSDISTTPIAALSPYQ
NKWVIKVRVTNKSPIRTWSNSRGEGKVFSMDLIDESGEIRCTAFRDMCDKFYDMLEIGNV
YYISRCQLKAANKQFNSLKNDYEMTMTNDTEIVPCHENIEDIPTLQFNFCSISQVENKER
NDIIDVLGVVTTFNDVQHIVKRNTGQEFVKRDINIVDDSNAMVSVTLWGKQAEDFDGSNN
PIIAIKGARIGEFNGGKNLSLLNSSTLEKDPDLPEAHRLRGWYTTVGHSENAKSLSRVGG
GGDFNAPLHTFEEATEARLGEKLNIPDSYTVMATICLIRVENSIYKACPVESCKKKLIDQ
STGIFRCEKCNRDYPNFVYRLLASMNIADATGSRWITAFSEDAEKILGMSAQELGELKEN
DNEAYMQKFGDANFKRFMFSLRAKSEVFQDEMRVRHTCSSVAPLNYKTHLTHLIDKVSKL
VHIERLESN
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagcaaacatgtacggcttaacggaaggagcgttagagaaaatcatgaaaggc
gtagatgtagacaagccggtatttcaaatgttgggttataaaaaactaccaaataaagat
ggtacaattggtaatgatcgatatagattacttgtttctgatggaaaaaacatgaattcg
tttacaatgttggctactcaattaaatcacctgatagaaaataatattttgactgaatat
gcaatctgcaaagtctcaaactatcatctgtcttcggtgaacagtggtggcaaagaaaaa
cgtgtgatactaataatgggtatcgaggtaacaactcctggcagcaaagttggatgtaaa
ctaggaaatccaactaatatagagagcaagtcagaagctgattcaactacagctgataaa
tctactggacaaactactggacgttatcaaactaatggtacagctcaaagaagcaattca
aataattacggttcttctgatatatctactacaccgattgcagcattaagtccttaccaa
aacaaatgggtgattaaagttcgtgtgactaataaatctccaatcagaacatggagcaat
tctcgtggggagggtaaagtattctctatggatctgattgatgagagcggcgaaattcga
tgcaccgcatttagagatatgtgcgataaattctatgatatgctggagattggaaatgta
tactatatctcccgatgtcagctgaaggcagcgaataaacagttcaactcattaaaaaat
gattatgagatgacaatgaccaatgatactgagatcgtgccatgtcacgaaaacattgaa
gacataccgacattgcaattcaacttttgttctataagtcaagtggaaaacaaggaaagg
aatgatataatagatgtattgggcgttgttacaacatttaatgatgtgcaacatatcgta
aagcgaaatactggtcaagaatttgttaagagagatatcaatatcgtcgacgacagcaat
gcgatggtaagcgttacgctttggggaaaacaggccgaagattttgatggttctaataac
ccgatcatagccattaaaggagcacgcattggagagttcaatggcggaaagaatttgtcc
cttttaaattcatccacacttgaaaaggatccagatttaccagaagcacatagattgcgt
gggtggtatactacagtcggtcattcggagaatgctaaatcactatccagagtaggtggt
ggtggtgatttcaatgcgccattacacactttcgaggaggcaaccgaagcacggttggga
gagaaactaaatatcccagatagttatacagtgatggccactatatgcttaattcgcgta
gaaaattctatttacaaggcatgtcctgtagaaagttgtaagaaaaagttaattgatcaa
tctactggaatattcagatgtgagaagtgtaatagagattatccgaattttgtatatcgc
ttgctagcaagtatgaatatagcggatgcaacaggcagtcgctggataactgccttcagc
gaagatgccgagaagatattaggcatgtcagcgcaagaattaggagaattaaaggagaat
gataatgaagcttatatgcaaaaattcggcgacgcaaacttcaagagattcatgttcagt
ttgagggcgaaatcagaagtttttcaggatgaaatgagagtgagacatacctgttcatcg
gtggctccgctaaattataagactcatttgacacatctgatagacaaagtttctaagctg
gtacacatcgagagactggaatctaactga
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integrated database retrieval system
