Camponotus floridanus (Florida carpenter ant): 105256601
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Entry
105256601 CDS
T03919
Name
(RefSeq) nuclear pore complex protein DDB_G0274915 isoform X2
KO
K18716
nucleoporin NUP42
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105256601
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105256601
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Nucleoporin_FG
Torus
Motif
Other DBs
NCBI-GeneID:
105256601
NCBI-ProteinID:
XP_011264982
UniProt:
E2AVY7
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MVICKYYRQGICRYGQYCQFEHINNFGNTKAEHNEDDIAVTVAKEVLLAERGGQWLLSCF
GPFRDRPIIPGMQDLSPEEVRYEMYEAQKNGLVEQAKLHFQQLCQDMKAKREALKNPTRE
TITMLKRILGSSQKAPHLGLVNSASTNNVFGNKTFGVQNNNPFGGGGFTSSSNTSSIFGK
SNNNSTVFGSTAPFGNNLGGFTTATNTNSFFGGTANTSTSFNNVQNNTPPFGTPQNNSIF
GTSTPQTVFGQNNNVFGSTNQLGNASSTSLFNNPMTSQANTSLFGGATTTTANLFGTSSS
GLQTNSVFGASTTSSGSSFSGGLFNQSKTQMPAFGGAPVFGGVTSNYANNSSGNSIFGVN
QTFGATTSGIFGGSTTATAPAFGVSTTTTTSVFGTSIATTTAPAFGTSVTTTPAFDLNQQ
HGNNTFGTTVSAPNVFGSTQNTDSTMSGNSNAPFGTSITAGPFVTVNSQQYDSANASSTS
FTGTGFGIAVASTNNTFGTTETSSNSIFANAGTTFATSNATIPNPAFPTSTFGNINVSSS
TSSTTLTTTTNPFAPRTQQGTPFGSVAQVQSNAIDLSSPFGKSPFNATTNTVIDDTVYSV
EGVLTDDEKSMYLAEKFIIGKIPLKPPTKDIR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggttatctgcaaatattatcgacaaggcatttgccgttacgggcaatattgtcaattt
gaacatataaataattttggcaacaccaaagctgagcataatgaggatgacattgctgtc
acggtagccaaggaagtgcttcttgcggagagaggtgggcaatggctattatcatgtttt
ggaccattcagagatcgtcctatcatcccaggcatgcaagatttatctcccgaagaggtt
cgatatgagatgtatgaggcacagaaaaatggtttagttgaacaagcaaaattacatttt
caacaattgtgccaagatatgaaggcgaaaagagaagcgttaaaaaaccccactcgagag
acaatcacaatgttgaaaaggattttgggaagcagccaaaaagctcctcatttgggccta
gtcaatagcgcatcgactaataatgtgtttggaaataaaacatttggtgttcaaaataat
aatccatttggtggaggagggtttacttcttcgagtaacacatcgtcaatattcggaaag
agtaataataattcaacagtgtttggtagtacggcgccctttggaaacaatctcggtgga
ttcactaccgcgacaaataccaattccttctttggtggaacagccaatacctcgacatcg
tttaacaatgtacaaaacaacactcccccgtttggaacacctcagaataattcaatcttt
ggcacatcgacacctcaaaccgtatttggccaaaataataatgtattcggctccacgaat
cagctcggcaatgcatcttccacttcactgttcaacaatccgatgacttcgcaagcaaac
acttctttatttggtggagcgacaaccactacggctaacttatttggcacctcatcatct
ggcttacagacaaactcggtattcggtgcttctactacctcatctggttcatctttcagc
ggtggtttattcaatcaatcgaaaacgcagatgcctgcgtttggcggagcgccagttttc
ggtggggtaacttccaactacgccaacaattctagtggtaattccatctttggcgttaat
caaacattcggtgctactacgagcggtatttttggtggatccacaaccgctacagcacca
gctttcggagtatctaccactacgacgacgtcggttttcggcacatctattgctaccaca
acggcaccggctttcggtacatccgttactacaacgccggcttttgatctgaaccaacag
cacggtaataatacttttggaacgacggtatctgccccgaatgtctttggtagtacacaa
aatactgatagcacaatgtcaggcaacagtaatgcaccgtttggaacatcgatcactgct
ggtccatttgtcaccgttaattcgcagcaatacgattctgcgaacgcgagctcgacatcg
tttaccggcacgggatttggtattgcagtcgcaagtacaaataatacgtttggcaccaca
gaaacgtcttccaattcgatattcgcaaacgcgggaactacctttgcaacctccaatgcg
acaattccgaatcctgcgtttcctacgtcgacatttggcaatattaatgtttcctcgtcg
actagtagcacaactctcactacaaccacaaatccatttgcacctcgaacgcagcaaggc
acgccgttcggaagtgtcgcacaagttcaatctaacgctattgatctctcctctccattc
ggaaaatcaccatttaacgccacaaccaacactgtcatcgatgatacagtttacagcgtg
gaaggtgtattaacggatgatgaaaagagcatgtatttggctgagaaatttattatcggt
aaaataccactcaaacctcctaccaaagatataaggtaa
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