Camponotus floridanus (Florida carpenter ant): 105256612
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Entry
105256612 CDS
T03919
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105256612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfo03041
]
105256612
Enzymes [BR:
cfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105256612
Spliceosome [BR:
cfo03041
]
Complex C
Other components
Step II factors
105256612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
EDC4_C
AAA_16
AAA_30
Motif
Other DBs
NCBI-GeneID:
105256612
NCBI-ProteinID:
XP_011265001
UniProt:
E2AVZ5
LinkDB
All DBs
Position
Unknown
AA seq
1204 aa
AA seq
DB search
MEEVTKLEHLSLVSKICTELENHLGLNYKYLAEFIIHLAEKNNTFAAFKKVLIENNAEFS
DSFIANLLRIIQHMKPAKTSTEKLSKLTNKQDELALKFPALALPNDDPQCSDINKGKDED
IVNDVMASLEAFAPSNKKLSSNTERNNSKINNGEQKSKREKRSRSRSRSRDRRRHRSRSS
NRKERRHRSRSRSRTHYRSRDSTRRRRSVSREHRRSLSRDGRDTRYSRKRDADRSRSGSV
EEMLSVEPEVGKIYAGKVANIVPFGCFVQLEGLRRRWEGLVHISQLRREGRVANASDVVS
RGQKVLVKVLSVGGQKVSLSMKDVDQETGKDLNPVVPIAKADEDEKHLRNPDRPTSLLEL
QGNYDEDETYSRKRVQRLSSPEKWEIKQMLAASCIDRNELPEFDTETGILPREDDEEEDV
EIELVEEEPPFLHGHGRALGDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQREQE
MDSVPTGLNKNWIDPLPEAESRTLAANMRGIGLQTQDLPEWKKHVIGGKKSSFGKKTNLT
LLEQRQSLPIYKLRDDLVKAVTDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQ
PRRVATMSVAKRVAEEFGCCLGQEVGYTIRFEDCTGPETSIKYMTDGMLLRECLMDLDLK
TYSVIMLDEAHERTIHTDVLFGLLKQAVGRRPDLKLIVTSATLDAVKFSQYFFEAPIFTI
PGRTFEVEVMYTKEPETDYLDAALITVMQIHLREPPGDILLFLTGQEEIDTACEILYERM
KSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVDP
GFVKQKVYNSKTGMDSLIVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAYRDEMLPTPV
PEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALESLHSLSALDNEGLLTRLG
RRMAEFPLEPNLSKMLIMSVHLQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQ
AEGDHLTLLAVYNSWKNNKLSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAG
KNTVRIQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQT
TKEYMREVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVR
RRRN
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggttacaaaattggaacatctatccttagtgtcaaaaatctgcacagagttg
gaaaatcatttaggattgaactacaaatatttggctgaatttattatacatctggctgaa
aagaataatacgtttgcggcattcaagaaagtattgatcgagaataatgctgagttctca
gactcctttatagctaatcttcttagaataatacagcatatgaaacctgctaaaacatct
accgaaaagctatcgaaactcacgaataaacaggatgaactggcattaaaatttcctgca
ctggcattaccaaacgatgatccgcaatgttccgatattaataaaggtaaagatgaggat
attgttaacgatgttatggcttctttagaagcatttgcaccgtccaataaaaagctttct
tcgaatactgaaagaaacaacagtaagattaacaatggtgaacaaaaaagcaaacgggaa
aagagaagcagaagcagaagcagatcgagagacaggagaagacacagatccagatcgtca
aaccgtaaagaaagacggcacagatctcgatccagatctcgaacccattacagatctcga
gatagcacgcgcagaagacgttccgtatctcgcgaacacagaagatcattgtcccgcgat
ggtagagatacgagatactcgaggaaacgcgatgccgatagatctagatctggatctgtc
gaagagatgctatctgtggaaccagaagtgggtaaaatttatgcaggcaaggtcgcgaac
attgtaccattcggctgtttcgtccagttggagggtctgcggcgtagatgggagggctta
gtccacatttcacaattacggagagaaggtcgagtagcaaacgcgagcgatgtagtctcc
aggggtcagaaggtcctcgtgaaagttctcagcgtcggtgggcaaaaagtgtctctaagt
atgaaggatgtcgatcaagaaaccggtaaagatctgaaccccgtggtgccgatcgcaaag
gcggacgaggacgagaagcatctgcgtaatccagataggcctacttccttgttagagcta
cagggtaattacgatgaggacgagacatattcgaggaagcgtgtacaacgtttgtcctcg
ccggagaagtgggagattaagcagatgttggcagcgtcgtgcatcgacaggaacgagtta
ccggaattcgatacggagaccgggatattaccgcgagaagacgatgaagaggaagacgtg
gagatcgagctcgttgaagaggagcctccgtttctacatggtcatggtagagcattgggc
gaccttagccctgtgcgaatagtgaagaatccggacggatcgctggcgcaagcagcaatg
atgcagagcgccttggcgaaggaacggagagagcagaagatgctgcagcgcgaacaagag
atggactctgtgcctaccggtctgaacaagaactggatagatccgttgccggaagcagag
agccgtactctggcggcgaacatgcgcggcatcggactgcaaacacaagatttaccggaa
tggaagaagcacgtgataggcggtaagaagtcttcgttcggtaagaagactaatctgaca
ttgttggagcaacgtcagagtttgccaatctataagttgcgcgatgacctggtgaaagcg
gtaacggacaatcagattctgatcgtcatcggagagaccggctcgggcaagacgacgcaa
attacgcaatacctcgcggaggctggctttaccgcgcgcggcaagatcggctgcacgcag
ccgagaagagtggcaaccatgagtgtggccaaaagagtagcagaggaatttggctgctgc
ctgggtcaggaagtagggtacactattcgtttcgaggattgtaccggaccagaaaccagc
atcaaatacatgaccgatggtatgttgctgcgcgaatgtttgatggatctcgatttgaag
acgtattcagtgatcatgctggacgaggcacatgaacgcacgatccacacagacgtgtta
ttcggtttgctgaaacaggcggtaggtcgtcggcccgatctcaaactaatcgttactagt
gcaactttggacgcggtcaagttttcgcagtactttttcgaagcgcccatcttcaccatt
cccggacgcacgttcgaagtcgaggtgatgtacacgaaagagccagagacagattatctg
gacgccgcgctgatcactgttatgcagatccatttacgcgaacctccgggcgacattctg
cttttcctcacaggtcaggaggagatcgacacagcctgcgagattctttacgagcgcatg
aagtcattaggtccggatgtgccagagttaatcatccttccagtgtactcggctctacct
tcggagatgcaaaccagaatatttgagccggcaccacccggctcgcgcaaggtcgttatc
gctacaaacattgccgaaactagtctgacgatcgacggcatctattatgtcgttgatccc
ggttttgttaagcaaaaagtttacaattccaagactggcatggatagtctcatagtaact
ccaatcagtcaagcggcagcgaagcaacgcagcggccgtgccggcagaactggacccgga
aagtgttacagactttacaccgagcgggcttatagagacgagatgttgcccacgccagta
ccggagattcaacgcacaaatttagctaccaccgtgttgcagctgaagactatgggcatc
aatgatcttttacatttcgattttatggacgcgccgccggtggagtcgctgattatggca
ttagagtcgttgcacagcttgagcgctcttgacaacgagggtctactgacgcgactgggt
cggcgaatggcagaatttccactcgagccaaatctatccaagatgttaatcatgagcgta
catcttcaatgttccgacgagatcttgactatcgttagtatgctgtccgttcaaaatgtc
ttttatcggccaaaggataagcaggctttggccgatcaaaaaaaggccaaatttaatcaa
gccgaaggcgatcatttgactttattagcggtctataattcttggaaaaataataagctg
agtaatgcatggtgctacgagaactttgtgcagatcagaacgctgaagcgcgcccaagat
gtgcgcaagcaactgctaggcataatggacaggcataaattggatgtggtgtcggccggc
aaaaatacggtgcgcatacagaaggcggtgtgttcaggatttttcagaaatgctgcgaag
aaggatccgcaggaaggatatagaacattggtcgatagccaagtggtgtacatacatccg
agtagcgcgttgttcaatcgccaaccggaatgggtcatctatcatgaattggtgcagact
actaaggaatacatgagagaagtgacgaccattgatccaaaatggttggtggaattcgcg
cctgcattcttcaagtttagcgatccgactaagcttagcaagtttaagaagaatcagaga
ctagaaccgctctacaataaatatgaggaaccgaatgcgtggagaatatctcgagttcgc
aggaggcgtaattaa
DBGET
integrated database retrieval system
