Camponotus floridanus (Florida carpenter ant): 105257045
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Entry
105257045 CDS
T03919
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105257045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105257045
03012 Translation factors [BR:
cfo03012
]
105257045
Enzymes [BR:
cfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105257045
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105257045
Translation factors [BR:
cfo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105257045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_C
HA2_N
AAA_22
ResIII
nSTAND3
NPHP3_N
AAA_19
ATPase
AAA_14
NACHT
Dynamin_N
PhoH
ABC_tran
NB-ARC
Pyr_redox_3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
105257045
NCBI-ProteinID:
XP_011265693
UniProt:
E2AXE3
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MSHRFNSRGRLNSFGRFNREEQMQSSASGYGRPYSQRPRHPPGLKGKEIGLFYRNLNREK
KKEQPTLRLSPHIEQKIKTILNNSKSFYSSIFDERCNSEYDDKYQHIHDSQFKRKFLEII
NGNIEHNLVKAISMEVKLQRNSNMDTILLNEYKDKQIQDNYLNMLKFRQKLPVYHKKSEI
LQLIKDNQVIVISGETGCGKTTQIAQFILDDQLEAGNGSITRIICTQPRRISAISVAERV
AAERTEKLGKSVGYQIRLEKIPTREQGSILFCTTGILLQIMKTDPALKDFSHVILDEIHE
RTTESDFIITLLKQVIPKRTDLKILLMSATLNSERFSKYYNECPMIHIPGFTYPVQEFYL
EDVLSLIQFRFPEAESTVYRKYGKAQRERYKEKVHKKEDFFDIIQPYIQQLRAEVKYAEH
VLSELRNPNSENLSLELIEKLVRYICNNKQPGAILIFLPGMMDISQLNKMMLESGCYPPN
KYIIYPLHSRMPTIDQKLIFKEPPDDIRKIIIATSIAETSITIEDVVYVIDCGKTKLGRF
DIAHNIQTLNPEWVSLANAKQRRGRAGRVKSGECYHLYSKAREMTFDQYPLPEMLRTRLE
EVILQIKMLQLGKAKEFLASIMDPPDLKAIDLSLNLLRTLNALDEEEHLTPLGYHLAHLP
LDPRTGKMILWAALFSCVEPIFAIAASLTFKDAFYCPLGKEEEANKKKLELSMGEYSDHI
ALAEALRRFEVARRRGNAGQFCREYFLSFNTLKLLSEMKIQFAQYLYEMKFLNSDNPGDK
NANRNSNNVALIKTIVCAGLYPNIAVIRRASKNGIFSWTPEDGSVRTHPSSVNCKASNFP
SQYLTYFTKQRSTAIYLHDTTCISIPILLFTGPNISIKREKGKYIINNFNLSENIICESQ
TAEVIQELQHALNCLLEYKITHPATVLWSSFEGQILNAIIELISQEDREMGYNKEDIYYS
SD
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaccgattcaattccagaggaagactaaattcctttggacgatttaatagagaa
gaacaaatgcaatcatctgcatctggttatggaagaccttattcacaaaggccaagacat
cctcctgggcttaaaggaaaggaaataggattattttatagaaatttaaatagagagaaa
aagaaggaacagccaactcttagattatcaccacacatagaacaaaaaattaaaactatt
ttaaataattctaagagcttttacagttccatttttgacgaaaggtgtaactctgaatat
gatgacaagtaccagcatattcatgattctcaatttaaaagaaaatttttagaaattata
aatggtaatatagagcataatcttgtaaaggctataagtatggaagtaaaattgcagaga
aatagcaatatggacacaatattattaaatgaatataaagataagcaaattcaagataat
tatttgaatatgttaaaatttcgacaaaagttaccagtgtatcataagaaatcagaaata
ttacaattgattaaagataatcaagttattgtcattagcggagaaactggatgtggcaaa
actacacaaatagcacaatttatattggatgatcaattagaagctggaaatggtagtatt
actcgaataatttgcacacagcctaggagaatttcagctatttctgttgcggaacgtgta
gctgcagaaagaacagaaaaacttgggaaatctgtaggctatcagatacgacttgaaaaa
attccaacgcgtgaacaaggaagtatattattttgcacaactggtatattattacaaatt
atgaagactgatccagcattaaaagatttctctcatgtgatattagatgaaattcatgaa
cgtaccacagaaagtgatttcattattacattattaaaacaagttattccaaaaagaacg
gatttaaaaattctcttgatgagtgcaacgttaaattctgaacgtttttcaaaatattat
aatgaatgtccaatgatacatataccaggattcacctatccagttcaagaattttattta
gaagatgttttgtcacttatacaatttagattccctgaagcagaatctacagtttacaga
aaatatggaaaggcacaaagagaaagatataaagagaaagtacataagaaagaagatttt
tttgatataatacaaccttacattcaacaattaagagctgaagtgaaatatgcagaacat
gttttgagtgaattacggaatccaaatagtgaaaatctttcattagagcttatagaaaaa
ttagttaggtatatctgtaataataaacagcctggagctattcttatttttctacctggc
atgatggatatatcacaattaaataaaatgatgttagagtctggatgttatccacctaat
aagtacattatttaccctcttcattcacgcatgccgacaattgatcagaaacttatattt
aaagaacctcctgatgatattcgtaaaataatcattgcaacttccattgctgagacatca
ataactatagaagatgtagtatatgtaatagattgtggaaaaacaaagcttggaagattt
gatatagcacataacattcaaactttaaatcctgaatgggtatctttagctaatgccaaa
caaagacgcggtagggccggcagggttaaaagtggagaatgttatcatttgtacagtaaa
gctcgagaaatgacatttgatcaatatccattgccagaaatgttacgaacgcgcttagaa
gaggtgattttgcaaataaaaatgttacaattaggaaaagctaaagagttcctagctagt
atcatggatccaccagatctaaaagccatcgatctgtctctaaatttacttagaacactt
aatgctctagatgaagaagagcatttaactcctttgggttatcatttggcacacttgcca
cttgatcctagaacaggaaaaatgattctctgggcggcactcttctcctgcgttgaacca
atatttgctattgctgctagtctcacatttaaagatgctttctactgcccgttgggaaaa
gaggaagaagctaataaaaagaagttagaactcagtatgggagaatatagtgatcatatt
gctctcgcggaagctctaagaagattcgaagttgcgcgccgaagaggaaatgctggccag
ttttgtcgagaatattttctctctttcaatacattgaaacttctctccgaaatgaaaatc
caattcgcacaatatttatatgaaatgaaatttctgaatagtgataatccaggcgataaa
aacgctaatagaaattcaaacaatgtagcgttaataaaaaccattgtttgtgccggatta
tatcctaatattgctgttataagaagagctagtaaaaatggaatatttagctggacaccg
gaagatggaagtgtacgtacgcatccgtcaagcgtaaattgcaaagcttctaacttccct
agtcagtatttaacatattttacgaagcaacgttccaccgctatatatttacatgatact
acttgtatcagtattccaattttattgtttactggaccgaatatatcaataaaacgagaa
aaaggaaaatacataattaataattttaacttgtctgaaaatattatttgtgaatcacaa
actgcggaagtgatacaggaacttcaacacgctctaaattgcttattggaatataagatt
acacacccagcaacagtactttggtcatcatttgaaggacaaatattaaacgcaatcatc
gaattaatatcccaggaggaccgagaaatgggttacaataaagaagatatatattatagt
tctgattaa
DBGET
integrated database retrieval system
