Camponotus floridanus (Florida carpenter ant): 105257117
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Entry
105257117 CDS
T03919
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105257117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfo03041
]
105257117
Spliceosome [BR:
cfo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105257117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
PRP4
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_EML
NBCH_WD40
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_NWD2_C
WDR54
Nbas_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
105257117
NCBI-ProteinID:
XP_011265834
UniProt:
E2AXK2
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MSDDEDLVYVKKQKTVHYGSLEEAERARLAALQVAVEAADEEKDATNANDITNASNLVGN
VHISNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKHLRQLGEPICLFGEG
PADRRTRLRELLASVGEDAIKKKHEEEEKPLHTVEKDTETTWYHEGPESLRIARSWIASY
SLPRAKVRLNEARQDLELPTATRTAKRQELLKKLQALTIYCSQIGDTRPISFCQFSPNSK
ILATASWSGLCKLWSVPDCTLLRTLKGHTCNVGCIVFHPKATITEDVIGDNAGQTCVLAS
CASDGTVKLWSGGTGEEPLAEVEGHEPHRVSRIAFHPSGRFLGTCCYDASWRLWDLEQQA
EVLHQEGHSRAVHCISFQCDGSVCATGSLDSFGRVWDLRTGRCIMFMEGHLTSIFGVDFS
SNGFHIATASEDNTCKIWDLRKRTCIYTIPAHTNLLSDVKYQRIEGQYLVTASYDNTAKI
WSNKTWQPLKVLPGHDGKVMSVDVSPDHKFIATSSYDRTFKLWAPE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgacgaggatttggtttacgtgaagaagcagaagaccgttcattatggctcg
ctggaagaggcggaacgcgcccggctcgcagctttgcaagttgctgtcgaagctgcggac
gaagagaaggatgccacaaacgcgaatgatatcaccaatgcttccaacttggtcggcaat
gtgcacatctcaaacgagtatatggaactcgaggatgaaatgtccaaagatcgccaggcg
ttactggaagaattcgaacgtaggaaaaaggccaggcagattaacgtttccacagacgat
tccgaggtaaagaaacacttgagacaattgggtgaaccaatttgtctgtttggcgaaggt
cccgcggatagaagaacaagattgagagaattattagcgagtgtaggagaagatgctata
aagaagaagcacgaggaagaagagaaaccgcttcatacggttgaaaaggatacagaaaca
acttggtatcacgagggtccagaatctttgcgaattgcacgatcatggatagcatcatat
tcattacccagagcaaaggtgcgattgaacgaggcgagacaagatctagaattaccaact
gcgactcgaacagcgaaaagacaagaacttttgaagaagctgcaagcattaactatttat
tgctctcaaattggagatacgaggcccatctccttttgtcagtttagccctaattcaaag
attcttgctacggcatcatggtcaggcttgtgcaaattatggtctgtacctgactgtact
ttgttgcgcactttaaaaggacatacttgtaatgttggctgtattgtttttcatccaaaa
gctacgataaccgaagatgtgataggtgataatgcaggacagacttgtgtgctggcatct
tgtgcatcagatggcactgtgaaattgtggagtggtggcactggcgaagaaccattggca
gaagtagaaggacacgagcctcatagagtttccaggatagcgtttcatccgtccggacga
tttcttggtacgtgttgctacgacgcatcttggcgattgtgggatttagagcaacaagca
gaagtacttcatcaagaaggtcactctagagctgtacattgtattagttttcagtgtgat
ggaagtgtttgcgctacaggtagtctcgattctttcggtagagtatgggatttgcgtacc
ggtagatgtataatgtttatggaaggtcatctaacatccatctttggcgtcgatttctcg
tcaaatggttttcatatagcgacagcaagcgaggataatacttgcaagatatgggacttg
cgaaagaggacctgcatatatacgataccggcgcataccaacttgttatccgacgtaaaa
taccagagaatagaaggacaatatttagttaccgcgtcttacgacaacacagccaaaatc
tggtccaataagacatggcaaccgctcaaggtgctaccaggtcacgatggaaaagtcatg
tctgtcgatgtgtctcctgatcacaaatttatcgcgactagttcgtatgatagaactttt
aaattatgggctccagaataa
DBGET
integrated database retrieval system
