Camponotus floridanus (Florida carpenter ant): 105257133
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Entry
105257133 CDS
T03919
Name
(RefSeq) nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105257133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105257133
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105257133
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N
Motif
Other DBs
NCBI-GeneID:
105257133
NCBI-ProteinID:
XP_011265863
LinkDB
All DBs
Position
Unknown
AA seq
1929 aa
AA seq
DB search
MEVSPMGNLPCSKDLWSIISGTTCCCAKETVEDEIKNGTVLFKEGLQFFKPYTDASLQSI
SKRDPPPLQQMYDLISKLAPLINLDATITWDLVCNFVSYEYRNCAETFAAQLTDLTSIKS
LIDDIWNFYYSERITLIKCLKLMIEYKDNERHPYHKEFAKFFDEILMGNLLESIQKQIKA
LKFVNPPTRSQFCTEDYLHRLYNSTLIEMRELLHILTVIVHDIHIANHEFVKFYGSIGGE
PRRLASTKSHEDKEAIIKKIEEIQYSQIGLLLVALDVRKHTDMEDWINSIGSNMQEIFEH
KCVRENSPQDGPLLLCWMLANYAIDPDNIDTLNRFRPFGIKAIQLDVFHYLRDLMNCEMF
QEETYYAEVVRSSVYNLLTLMCAFVDEDRLSTLNGIFDAMAATIKFPECATRFWNEQYDG
LWPIYKVAVELYPYKFEPLTSIAIGLASTTIASAKKIALELDNLQTVTIEIPRQRDHSKS
LQPYKAECIIQKNLFTIFSNCARENIAVLSPEKEVVLFRTKASYWNALHHKIEQLFSQAS
GGIANISAVKTDLPKNVCHGLKLLEALLAKDIEIPSSMVTPTELSFEIINRFSYPVLPTN
LYKIVAVCIGISSKLVLRYPEDILSRMRSGVYPRFNNWYQKPVDFAEAISFDGGLIASWL
SGIETIEHTYPILRAFLDTLYNYLIAKHSKEAMYTIEIPGMVFLLQAVLPKLDSWYFKSN
AERIDLWLKSMFCIHRALESTLSKNDIRNELQLVVVYSLLYLEPRHALLKLLRTGERTLH
NKMITETDWISGKGFKTTKSVELALSIVNRLLMFRKSLGLELGDRSPLEIALYSSPRVPN
GLLIVPTIVNYLYVWFSPSLQKMAVRLLKKFAEEFSMSLLVCMGMDGTSIRETFAFRLTL
PTCAIEVKVAILELVAVCLEKQPGLTEALFNIMHQAERKRIFPRPADEFLTEGCSQFLDS
YLERMYKESDIVCDKLYDSTMAVLRAMWYYRNEILVNFFRKREKFWSHLFAPLFKPLVPG
AKGYSQLLDVITLELYKSPLLEDNFSKNLKELLDKSKDHWKKLAIYVLDVANGEDNGTKE
EHIKQDKIVDPLYEINLESWYHFIVMLTDDRTAKHYPINVTQAHLLTQLALDSLLERVKE
SNDTSSGKIPMLLASLSLRCITSWKQMCVGDSRIFKTRLSQLTQEIAQTYRGFGKALRQT
MISLLLGCVQLVKSTLAEDSASLEYLLAHSCTIAICELEELKEAAFQLERRKQQISVELI
KTEEKDTQKKAECHSVETLRGIRESLPATLAVSMVTQLLRSYVERNANFKHRLRASCVQL
RQMIPELMACVGYTLQKYPYFKFSIAALSLLGVISRSPYCPHPISDNDIAKLWLSLIPPA
DIANSMLDSLYDDSANGRWRCQDWWPIYTLGLEFLIGLVTSETHMVYINHVILFLNSHEH
QLMVVSTLLRHTADLLAADLIQSLIALIHAVATQTYVWNAIQPRIRETLIKCIYLVYDST
VNLLLRPRILKFIIDGISVESAEELESCDNRLPSGELKLLVNKLIVINTTCALTFVHFSP
KLNTLVDTIYTQNYWYTPMAEMNFGPPQMSMSSGPRLTYGTIISSTQLFTQALHSRSQPV
ASLPTSLIPHTTGREDKTDSAKKEWERAAPENLRRMHTSKDLRRIIHAASGSISRTSTSN
IGSREFLGYPVSGLDVTVPLLSSPRLVRRPYDPLICENTILSRATALATGRHVAKSSGSG
TGGNGSPIIARNHRFCDPWFESMDENNTRLALEINLILILSQALEGVKSPRLALRDRQLI
ARETATELGVFFDFLEHRGTPDIWQVKGSLIDADTRSSRTIQDTSDPTQMNLPARLQKNS
TIDKTPVCLPDHEDSSMEVIQTETREKRLDDSILTTGVFKTNVSSVQFLPLMGKLLKTVV
ESLDSAQFR
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggaagtatctccaatgggcaatttgccttgcagcaaagatttatggtccataatatct
ggcacaacatgctgttgcgctaaagagactgtcgaagatgaaattaagaatggaactgta
ttattcaaggaaggacttcagttttttaagccatatacagatgcatcgttgcagagtatt
tctaaaagagatccgcctcctcttcaacagatgtatgatttgattagtaaacttgcccca
cttattaacttggatgccacaattacttgggatcttgtgtgcaattttgtatcctatgaa
tacagaaattgcgcagagacttttgcagcacagcttactgatcttacttctataaaaagt
ttaatcgatgatatttggaacttttattattctgagagaattaccttaataaaatgcctt
aaacttatgattgaatataaagataacgaaagacatccttatcacaaggaatttgcaaaa
ttttttgatgagatcttgatgggcaatctacttgaatctatacaaaagcaaataaaagca
ttgaaatttgtaaatccgcctacacggtcacaattctgtaccgaagattatttacataga
ttatataatagtactttgattgaaatgcgagagctgcttcacatactgactgtgatcgtg
catgatatacatattgctaatcatgaatttgttaagttttatggaagcattgggggcgaa
cctagacgattagcaagtacaaaaagtcatgaagataaggaagctattattaaaaaaatt
gaagagatacaatacagccaaataggattattacttgtagcattggatgtgagaaagcac
actgatatggaagactggataaatagcattggaagcaatatgcaagaaatatttgaacac
aaatgcgttcgtgaaaattcaccacaagatggaccattgcttctatgttggatgttagca
aattatgcgattgatccggataatatagacacattaaatcgctttagaccatttggtatt
aaagccatacaactcgatgtgttccactatctacgagatttaatgaactgcgaaatgttt
caagaagagacttattatgctgaagttgtgcgaagcagtgtttataatcttcttactttg
atgtgcgcttttgtcgacgaagatcgattaagtactttaaatggtattttcgacgccatg
gctgctacaatcaaatttccagaatgtgctactagattttggaacgaacaatacgatggc
ttatggccgatttataaagttgctgtagaattatatccttacaagtttgaacctttaacc
agtatagctattggtcttgcatccacgactattgcgagtgccaaaaagattgcattggaa
ttggataatctacaaacagtgactatagagattccccgtcaaagagatcatagtaaatca
ttgcagccatacaaagcggaatgtataattcagaagaatttatttactatcttcagcaat
tgtgcgcgcgaaaacattgccgtactatctccagagaaagaagtggttttatttcgtaca
aaggcaagttattggaatgccttacatcataaaatagaacagttattttctcaagctagc
ggcggaattgcaaatataagcgcagtgaagacagatttaccgaaaaatgtttgtcacggt
ttgaaactattggaagcattattggctaaagacatcgagataccatcaagtatggtcact
cccacggaactgagtttcgaaatcattaatcgattttcatatccggttttaccaacgaat
ttatacaaaatcgtcgccgtgtgcattggtatttcatcgaaattggttttaagatatcct
gaggacattctctcacgtatgcgatcaggtgtttacccaagatttaataattggtatcaa
aagccagtggactttgctgaagcaatctcctttgatggtggtctcatcgcgtcgtggctt
tcaggaatagaaactatcgaacatacttatcctattctacgtgcatttttagacacttta
tacaattatctaatcgccaaacacagtaaagaagccatgtataccattgagataccaggt
atggtatttctgttacaagctgttttacccaagttagactcgtggtattttaaatccaat
gcagaaagaatcgacttatggctgaagagcatgttttgtattcatcgagctctagaatct
actctatccaagaatgatattcgcaacgagttgcaacttgttgtagtatatagtttactc
tacttggagccgcgtcacgcactgttgaagttactccgaacgggcgaacgcacattgcac
aataaaatgattacagagacagattggattagtggaaaaggattcaagactaccaaaagc
gtagaattagccttgtcgatagtcaatcgacttttaatgtttagaaagtctctgggtctc
gaattaggcgatagatcgcctctcgagattgctttgtattcttctccgagagtacctaat
ggacttctcatagtaccgaccatcgttaattatttatatgtttggtttagtccttcattg
cagaaaatggcagttagattattgaagaagtttgcagaggaattttctatgtctttgctg
gtctgtatgggaatggatgggacttctatacgagaaacctttgcatttcgattgacgcta
ccgacatgcgcaattgaagtaaaagtcgctatcctggaattggttgccgtgtgcctcgag
aaacagcccggcttgacggaagctctcttcaacatcatgcatcaagcagaacgcaagaga
atttttcctcgtccagccgatgagttccttacggaaggctgcagtcaattcttagactca
tatttagaacgaatgtacaaagaaagtgatattgtgtgtgacaagttgtatgacagcaca
atggcggtattacgcgccatgtggtattatagaaacgaaattcttgtcaatttcttccgc
aagcgagaaaaattctggagtcatctgtttgctccgcttttcaaacctttggtaccaggt
gcaaaaggttattcccaattgttagacgtaattacgttagaattatacaaaagtccatta
ctcgaagataatttctcaaaaaatttaaaagaactgttggacaaatccaaggatcattgg
aaaaaattagccatatatgttctcgacgttgcaaacggcgaagataatggtactaaagaa
gaacatataaaacaagacaaaatcgtcgatccgttatatgaaattaacttagagtcttgg
tatcactttattgtcatgctcactgacgatcgaacggctaaacattatccaattaacgta
acacaggcgcatcttctaactcagttggctttggattctttattggagagagtaaaggaa
tccaacgataccagcagtggcaaaattccaatgttactggcctctttatccttgagatgc
atcacttcttggaaacagatgtgtgttggcgattcaagaatcttcaaaaccagactgtca
cagctcacgcaagagatagcgcagacttatcgcggtttcggaaaagccctacgtcaaacg
atgatttcattattacttggatgtgtgcaactggtgaaaagtaccttagccgaagattca
gcgagtttggagtatcttttagcacattcctgtacgatcgctatttgcgaattggaagaa
ctgaaagaagctgcctttcaattagaacgtcgtaaacaacaaatttctgtcgagctcatc
aagaccgaggaaaaggatacgcagaaaaaagctgaatgtcacagtgtggaaactcttcgt
ggtatacgggaaagtttaccggcaacattagctgtcagcatggtgacacaattgttacga
tcgtacgttgaacgtaatgcaaatttcaagcatcgtttacgagccagttgcgtacagctg
cgtcaaatgatacccgaactgatggcatgtgtcggttacacgctgcagaaatacccgtat
tttaaattcagcatagcagccctaagtttactaggtgttatatcgcgttcgccgtattgt
ccgcatcctatcagcgacaacgatattgcgaagctctggctcagcctaattccaccggct
gacattgccaacagtatgctcgactcgttgtacgacgattcagcgaatggtcgatggcgt
tgccaggattggtggccaatatacactttgggcttagagttcttaataggtctggtgacc
agcgagacacacatggtgtacattaatcatgtgattcttttcttaaactctcacgaacac
cagttaatggttgtctccactttactgagacacactgccgatttattggccgctgatttg
atacaatcgctgatcgctcttatacacgctgtagctacgcaaacatatgtttggaacgcg
atccagccgaggattcgcgagactctgatcaagtgcatatacctggtgtatgatagtacg
gtgaacttgttattaagaccacgaatactgaaatttatcattgacggtatcagcgtggaa
agtgctgaggaactcgagtcttgcgataatcgattgcctagcggtgagttgaagctattg
gtgaataaactgattgtcataaacacaacttgcgcgctaacttttgttcatttttcgccg
aaattgaacaccctcgtggacacaatatatactcagaattattggtacacgccgatggcc
gagatgaattttggtccaccgcagatgagcatgagttccggtccgcgactcacctacggc
acgatcatcagttcgacacagctgttcacccaggctcttcattcccgctcgcagcccgtt
gcttcgttgcccacttctttaatcccgcatacaactggacgcgaagataaaacagattct
gcaaagaaggaatgggaacgcgccgcaccagagaatctccggcgtatgcacacgagcaag
gatctgcgaagaatcattcacgctgcctcgggctcaatttctaggacgtcgacatccaac
attggctccagagaatttctgggatacccggtcagtggcttggacgttactgtgccgttg
cttagtagtcctagactcgtacgtcgtccatacgatccgttgatatgtgaaaatacgatt
ctttcgagagcgactgctttggcgaccggtagacacgttgcgaagagtagcggcagcggc
accggtggcaacggtagtccaatcatagcgagaaatcatcgtttttgcgatccgtggttc
gaatctatggacgagaataatacacgattggcattagagatcaatcttattctaatactg
tctcaagcgctggaaggtgtgaagagtcctagactcgcattgagagatcgtcaacttata
gcacgggaaaccgccacagagttgggggtcttcttcgattttctcgaacaccgcggtaca
cccgatatctggcaggtaaagggctccttgatagacgcggatacacggagctccaggaca
attcaggataccagtgatccgacacaaatgaatttaccggcaagactccagaagaacagt
actattgataaaacgccggtgtgcttacccgaccacgaagactcttccatggaagtaatt
caaaccgaaacacgggagaaaagacttgacgatagtatccttacaacaggcgtttttaaa
actaatgtcagcagcgtacaattcttgccgttgatggggaaattactcaagacagttgtc
gagtcattggattcagcacaattccgataa
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integrated database retrieval system
