Camponotus floridanus (Florida carpenter ant): 105257366
Help
Entry
105257366 CDS
T03919
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03013
Nucleocytoplasmic transport
cfo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105257366
03015 mRNA surveillance pathway
105257366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105257366
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105257366
mRNA cycle factors
P-body specific factors
105257366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
105257366
NCBI-ProteinID:
XP_011266238
UniProt:
E2AYH1
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MSENTIEATTAEKEATSEENAVSEEDRQYLTEYVRETEQRLATKEEIRAANLNPTRPSDT
SFSKLDSSLKRNTTFVKKLKNFSMTQLDTVLKDMANLNLTKYVSEVATALVDAKLKMTDV
APAIRVCSFLHQTYAEFSTHFFENWQRILSLKINDKISNPSKLRVDLRFYAELVNAGIFT
HKQGLSLLGSVLTVLINMDKEEHNNASIILSFCRHCGEDYAGLVPKKVRELSEKLNVPIP
KSKLLSPDKQQNVKLLLRDYYNSLCKHLLKEHKELQAFEKQNRKILQTRGELSLERKEKL
EALQVSYERLLTSVQSFSDTLDEPMLELPVDNEMKAETEETLKMINEGEDSTILEDMWGD
EETRRFYEVFPDLTVFLPGSYLKETPKEASKTDVSITEDALDEEIVFDEMDEAEKIEEPP
EPEVEEPQVSNTSNKILLDAFLTHLPNCVNREMIDNAAVNFLMNLNTKHNKKKLVKALFG
VSRIRQDLLPFYSRLAAILHPVMPEIGNDLCQMLKQDFKYHVHKKDQINIESKIKVVRYI
GELVKFKLYSKIEALYCLKVLLHDFTHHHIEMVCNLLEICGRYLFCSPDSHQRTKVYLEQ
MMRKKAVTALDSRYVTIIENAYYFVNPPESTGGVTKKDRPPVHEFIRKLLYQDLSKTNTD
KVLKWMRKIDWEDETVSTYAIKCLTAAYNVKYPNIRCVGSLLAGLVAHYETIGPQVVDGV
LEDIRLCMEINLPKYNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITLGVSVDHSSPS
VLDPPDHLFRIRLVCTLLETCGQYFSGGSSKKKLDYFLIFFQHYFWFKYTDPIWTTENPF
PVGIDYMYRDTLTMLRPKMQLFQNYKEAQCAIEELRNTLYPSLGNTPIDDVVAEGENEMS
VIMEGDEEVAATGNGSGDAKGIAELHFEESEDCSEAQSEEEWTADAERDDAMGTQENTQG
DRSQSLSAEGGTEGVIMDVTEELNAALPAGPRRVSCPEDDDFLSALDKMVSDNIQDRMRD
SIKPQQVDISVPLHVKSTKKTYEQLQERPSDNNTVDFVLMLRKGNKQQYKNLAVPVSSEL
AMNLRNREQEQKEEKERVKRLTLNITERQEEEDYQETMNQSTRPVTVNLNRERRQKYNHP
KGAPDADLIFGPKKIR
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaatacaatcgaagcaacaacagcagaaaaagaagctactagtgaagaaaat
gctgtctcggaggaggacaggcaatacttgacagagtatgtgcgagaaacagaacaaaga
cttgcaacaaaagaagagattcgtgcagctaatctaaatccaacaagaccttcggataca
tcattcagtaaacttgattcgagtcttaagagaaataccacatttgtcaagaaattgaaa
aactttagcatgactcaactcgataccgttctaaaagatatggcaaatttaaatttgact
aaatatgtaagcgaagttgctaccgctttagtggatgccaaattgaaaatgactgatgtt
gctccagctattagagtatgcagttttctgcatcaaacatatgctgaattttctactcat
ttcttcgaaaactggcaaaggatattatcattgaaaatcaatgacaagatctcgaatccc
agcaagttgagagtagatcttcgattctatgcagaactggtaaatgctgggattttcaca
cacaagcaaggtttgtcactgctcggttcagtgttaaccgtattgatcaatatggataag
gaagagcataataatgccagcataatattgagcttctgccgacattgtggcgaagattat
gccggtcttgtaccaaaaaaggtacgagaactatctgagaaactaaatgttccgattcca
aagagcaagcttttgtcaccagacaagcaacaaaatgttaaattgttactgcgagattat
tacaactctttatgcaaacatttgttgaaggaacacaaagaattgcaggcatttgaaaag
cagaatcgcaaaatattgcaaacaagaggcgaactgagtttagagagaaaggaaaaatta
gaagctcttcaagtctcttatgaacgtttgctaaccagtgtacagagcttttctgatacg
ctagatgagccgatgcttgaacttccggtggacaatgagatgaaggccgaaactgaagaa
acactaaagatgattaatgagggagaagatagtaccattttggaagatatgtggggtgat
gaggaaacgagacgtttctatgaggtattcccagacttgacagtctttctgccaggttcg
tatttgaaagagacaccgaaagaagcatcaaaaacagatgtatcaataacagaggacgct
cttgacgaagagatagttttcgatgagatggacgaagccgaaaaaatcgaagaaccaccg
gaaccagaagtagaagaaccgcaagtgtccaacacgagcaataagatattattagacgct
ttcttgacacatctgccaaactgtgtcaatcgggagatgatcgacaacgctgcagtgaac
tttttgatgaatctcaatacgaaacacaataagaaaaaattagtaaaagctcttttcggt
gtttctaggattcgccaagatctgctaccgttctactctcgcttagcggccatccttcat
ccggtgatgcccgaaatcggtaacgatctgtgccagatgctaaagcaagattttaaatac
cacgtccataagaaggatcagatcaatatcgagtcgaaaatcaaggtggttcgctacatc
ggcgagctcgtcaaatttaaactctactctaagatagaggcactctactgcttgaaagtg
ttgttgcatgatttcacgcatcatcacatcgagatggtctgcaatctgctggagatctgc
ggtcgatatctcttctgctcgccggattctcatcaaaggaccaaagtctacttggaacag
atgatgcgtaaaaaggcggtcactgcacttgattcacgctatgttacgattatcgaaaac
gcatattacttcgtaaatccacccgagtcaaccggtggtgtcacaaagaaagatagaccg
cccgtgcacgaattcatcagaaaattgttgtatcaagatctctctaagacgaatactgat
aaagtactcaaatggatgcgtaaaattgattgggaagatgagaccgtgtcgacgtatgct
atcaaatgtcttactgccgcttacaatgttaagtatcccaatattcgctgcgtcggtagt
ttattagccgggttggtggcccattacgagaccatcggccctcaggtagtcgacggtgta
ctcgaagatatacgactctgcatggaaatcaacttgcctaaatataatcaacgacgcatc
gctatggtcaaatacttaggcgaattgtataattaccgaatggtagaaagtggcgacatt
ttccgtactttatatttgctgatcactctcggcgtcagtgtggatcattcgtcaccaagc
gtacttgatccacccgatcatctctttcgcattcgcttagtgtgcacgttattagagact
tgcggtcagtatttcagcggtggctccagcaaaaagaagcttgattattttctgatattt
tttcagcattacttttggttcaagtatacagatcccatctggacaacggaaaatccattc
cccgtcgggatagattacatgtatcgcgatacattaacgatgctgcgacctaaaatgcaa
ttgtttcagaattacaaggaggcacaatgtgctatagaagaattgcgaaacactttatat
ccaagcttgggtaatactcccattgatgatgtcgttgcggaaggggagaatgagatgagc
gttatcatggagggtgatgaagaagtagcagcgaccggaaacggtagcggagacgcgaaa
ggtatagctgaactacacttcgaagagtctgaggattgttcggaggcgcagtcagaagaa
gaatggacggctgacgcggagcgagacgatgctatgggcacccaggagaacactcagggt
gatcggtctcagagtttgtcggcggagggtggcaccgagggtgtaatcatggacgtaact
gaagaattgaacgcggctttaccagccggaccgcgacgtgtgagctgtccagaggatgat
gatttcctgtccgcgctagataaaatggtgtcggataatatacaagatagaatgcgagat
tcgataaaaccgcaacaggttgacatctctgtaccattgcatgtgaagagcacgaagaaa
acatacgagcagttacaggagaggccgagtgacaacaatacagtagactttgtgttaatg
ttgagaaagggtaataagcaacaatacaagaatctggcggttccagtatcatcagagttg
gctatgaatcttaggaatcgcgaacaagaacaaaaagaggagaaagagcgcgtaaaaagg
ctgaccttgaacattaccgagagacaagaagaggaagactatcaggagactatgaatcaa
agcactagaccagtcaccgttaacttaaacagagaacggcggcaaaagtataatcatcct
aagggagcccccgacgctgatctcattttcgggccgaagaaaattcgataa
DBGET
integrated database retrieval system
