Camponotus floridanus (Florida carpenter ant): 105257448
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Entry
105257448 CDS
T03919
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105257448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfo03041
]
105257448
Enzymes [BR:
cfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105257448
Spliceosome [BR:
cfo03041
]
Complex A
U2 snRNP components
U2 related factors
105257448
Complex B
105257448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
105257448
NCBI-ProteinID:
XP_011266360
UniProt:
E1ZYN1
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSGEPEKKRRRTRSKDRERDRDKGRHRERRSRSRDRDRE
RSDRRERSERDRDRERKRGDSKEKRLTGSKSSRSGKERSNRSRSRDRKDKEKGDSEELPF
DHTKLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKTSILANFQLPMKKWS
LEDDSDEETPVVQNNKEAKEEGAKEEIEEVKEEVKDEEEEIDPLDAFMAEVQEEVRKVNK
FDSKAPKNANNGTNSNAQSVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLHET
AAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTPEEVEMYKEELEGIRVKGKG
CPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAF
LLPMFRHILDQPPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGIS
EQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI
MENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQKF
YKLLEILGHYQDKGSIIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILDFK
AGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITSE
QERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKQVHTGGGFSGKGFKFDESEAA
LANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPTATNITVPGQPVP
SATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAAKL
NTKLNYQPREEDLVESDAETGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSEA
GLTVRGTYIAPGRTPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQASGAHTA
SRGRYKVL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaagtagcgacaaggatagacatcatcggcgaagatcgcgatcgagatcgaga
tctagatcgggcgaacctgagaagaaacgacgacgtaccagaagcaaggaccgagagagg
gacagagacaagggacgtcatagagagcggaggagtcgttcacgggatagagacagagaa
aggagtgatagaagggaacgttccgagagggacagagatcgcgaaagaaaacgtggagac
agtaaagaaaagcgtcttacaggctcaaagtcttcacgctctggcaaagaacgatcgaac
agatctcggtcacgcgacaggaaggataaagagaagggggacagcgaagagttgcctttt
gaccatacaaaattggacaaggaggaagaacaaaaaagactagagttggaaatgcaaaag
agaagagaaaggatagagagatggcgtgcagaaaggaagaagaaagagctggaagcaacc
aaaaaagacggtaagacatctattttggcaaattttcagctacccatgaaaaaatggtcc
cttgaggatgatagtgatgaagagactcctgtggtacagaataacaaggaggcaaaagaa
gaaggtgcaaaggaagaaatagaggaagtgaaagaagaagtaaaagatgaagaggaggaa
attgatccactagatgcttttatggcagaggttcaagaagaagtgagaaaagtaaataaa
tttgatagcaaagctccaaaaaatgcaaacaatggcacaaattctaatgctcagagtgtg
gttattgtgactggtgtggctaagaaaaaggttcagaaacaaaagggagaattgattgaa
caaaatcaggatggattagagtattccagtgaagaagaaggcgagaatcttcatgaaact
gcagctggtatagcaaataaacaaaaacgagaattagccaaagttgatcatgctacaaca
gaatatcaaccgtttcgaaaatcgttttacgttgaagttcctgaaattgcaagaatgaca
ccagaagaagtagaaatgtacaaagaagaattagaaggtattcgtgtgaaaggtaaaggt
tgcccaaaacctatcaagtcttgggcacaatgtggtgtaaccaagaaggaattagaagtg
ttgaaaaaacttggttacgagaaaccaacacccattcaatgccaagcaattccagctatt
atgtctggtcgtgatctcataggtatagcaaaaactggtagtggaaaaacattagccttt
ttattgcctatgtttcgccatatactcgatcagccaccattggctgatggtgacggaccg
attgcattgattatgacaccaactagagaattatgcatgcaaattggcagagactcgaaa
aaatttacaaaatcactggggctttcgcatgtgtgcgtttatggtggaactggcatctct
gagcaaatagcggagcttaaaagaggagctgagattatcgtatgtacaccgggaaggatg
atcgatatgctcgctgctaatagcggacgtgtaaccaatttacgtcgcgtgacatatgtg
gtactcgacgaggccgataggatgttcgatatgggtttcgaaccgcaggtaatgcggatt
atggaaaatgtgagaccagatagacagactgtgctgttcagtgcgacatttccgagacaa
atggaagcgctggccagaagaattcttacgagaccggtagaggtgcaggtcggtggacgt
tctgttgtttgtaaagatgtcgagcagcatgtggttgtactcgaggaagaccaaaaattt
tacaagttgctcgagattcttggacattatcaagacaaaggttccatcattatattcgtg
gacaaacaagagaatgcagatacattgttgaaagatcttatgaaagcttcatattcctgc
atgtctcttcatggtggtatagatcaatgcgacagagattcgactatattggacttcaag
gctggacggacaaaattactcgtcgctacctctgttgccgctagaggtttagatgtcaag
catttagtattagtcgtgaattatgattgccctaatcactatgaagattatgtgcacaga
tgtggtagaactggtcgagctggaaataaagggtatgcgtacacttttattacgtcagag
caagaacgttatgccggcgatattctacgtgcgcatgaattagcaggtgtacctgttcca
gaacccttgcgtcagttgtgggagggttacaaggcccgtcaagctgcagatggaaagcaa
gttcataccggaggtggtttcagtggcaaagggttcaaattcgatgaatcagaagctgct
ttagcaaatgagaaaaagaaatttcaaaaagcagctttgggattgcaagattctgatgat
gaagacattgaaaatgatatcgatcaacaaattgagagtatgctggcgcctaaacgaaca
gttcgtgaaatagccagaccaaccgcgactaacatcacagtacccggtcaaccagtacct
agtgccaccgataaactagaattagccaggagattggcatcgaaaataaatattgctaag
aatctgggcgctgaagcgaaaggcgccactcaacaagccgcggaagccatactcaaagga
gcaggacctacgaatcttattacagcaaagacagtcgctgaacagctggcagcaaaattg
aacactaaattaaattatcaaccgcgtgaagaagatctagtagagagcgacgcggaaacg
ggtgaacaaacgttccgcaagtacgaagaggaactcgaaatcaatgacttcccacagcaa
gcaagatggcgagtcacaagcaaggaagctttagctcaaatttcggaatattctgaggca
ggccttacagtcagggggacgtatattgcacctggaagaacaccaccagagggcgagaga
aaattatatctggcgatagaatctacgagcgaattagcagtcagcaaagccaaggcggag
gtatctcggctcattaaggaagaacttattaagttacaagcatctggcgctcacaccgca
tcacgtggtcgatataaagtcttataa
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