Camponotus floridanus (Florida carpenter ant): 105257615
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Entry
105257615 CDS
T03919
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105257615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105257615
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105257615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
Ras
Dynamin_N
SpoIVA_ATPase
Motif
Other DBs
NCBI-GeneID:
105257615
NCBI-ProteinID:
XP_011266652
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MSRHRDVRCMNYSDEYDGYDDVYGHSMEDDYCVSPSAEQFLFDRSKQQNIASFITEPDIV
EDNEDIDESSSSLNEDKYNLSELEKAKLIFCLEAIRNIIGDAVPESKLKEKIITSNFDTD
VALDAILKESSPKNDPVISKERLERYPGNKLSSKSALQVTTPSTVKVVPAGTKPVVKGFD
LSGVENADLLNPCCESPSSNRNSPETKRKEDIIQREKKTVSSKTNSPRCQSPISGHVTPE
FDHKGKSNAANEEKIDVQAIYKDKRGDSKEQLHLVVVGHVDAGKSTLLGRLLCDLGQVSQ
RLIHKYQQESKKIGKQSFVYAWVLDETGEERERGITMDIGHSKFETDTKSITLLDAPGHK
DFIPNMITGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAVVVNKLD
TVNWSKDRFNEIVDKMSVFLKQAGFKDTVTFVPCSGLSGENIVTKPKEQLSNWYTGPTLI
SVIDNFKCPERPVNKPFRFSVNDIFKGTGSGFCVSGHVETGMVSLGDKVLILPQNEIAVV
KGLQSDEISTTNAFAGDHVALTLAGIDQQNVGVGDIICNPQNPVPVTTCFQAHVVIFAIA
RPITKGLPVVMHQQSLVQPAFITKLIAQLHRSTGDVIKKKPRCLPKNSSAIIEVATQNPV
CMELYKDIKQLGRVMLRLEGTTIAAGLITKIL
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacatcgagacgttcgttgtatgaattattcagatgaatatgatggctacgat
gatgtatatggacattcaatggaggatgattattgtgtatcacctagtgcggagcagttt
ttatttgatcgaagcaagcaacagaatattgcttcctttatcacagaaccagatatagtg
gaagacaatgaagatattgatgaatcttcgtcatcactcaatgaagataaatataatctt
tccgagttggaaaaagcaaaattaatattttgtttagaagcaattagaaatatcataggt
gatgctgtgcctgaatctaagttgaaggaaaagattattacatcaaattttgatacagat
gtagcacttgatgctattttaaaagaatcttcgccgaaaaatgatccagtgataagtaag
gaacggttggaacgatatccaggtaacaaattatcatctaaatctgcattgcaagttaca
acaccttctactgtgaaggtagttcccgctggaacgaaacccgtagtaaaaggtttcgat
ctaagcggtgtagaaaacgcagatttattgaatccgtgctgcgagagcccgtcttccaat
cgaaatagtcctgagactaaacgtaaggaggatatcatacaaagggagaagaaaacggtc
tcgtcgaaaactaacagtccgagatgccaatcacccatatcaggtcacgtaacaccggaa
tttgatcacaagggaaaatctaatgcagctaatgaggagaaaattgatgttcaagcaata
tataaggataagagaggcgatagcaaggagcagcttcatttggtagttgtaggacatgtc
gacgctggaaaaagcacgttactcggacgactactatgcgatttaggtcaagtgtcgcag
agactcattcacaagtaccagcaagaaagcaagaaaataggaaagcaatcgttcgtctac
gcttgggtactcgatgaaaccggtgaagagagagaacgaggaataacgatggatataggc
cattcgaagtttgaaacagacacaaagtctatcactctcctagatgcgcctggccacaag
gattttattccaaatatgataactggcgctacgcaagccgacgtagctttattagtggtt
gatgcgaccagaggcgagttcgaaactggatttgacagtggaggacaaacgcgcgagcac
gcacttttacttcgttctttaggggtatcgcaactggcagtagttgtaaataaacttgat
actgtaaattggtccaaggacagattcaacgaaatagtagataaaatgagcgttttcctg
aaacaagctggctttaaagacactgtcactttcgtaccttgtagtggtttatccggcgaa
aacatcgtgacaaaaccaaaagaacaactctctaactggtacactggacctactttaatc
agtgtaattgataatttcaagtgcccggaacgacctgtaaataaaccattccgtttctcg
gtcaatgatatatttaagggtactggatccggattttgtgtatctggccatgttgaaacg
ggtatggtatctttaggtgacaaggtactgatattaccacaaaatgaaattgcagttgtt
aaaggtctccaatcggatgaaatctcgacgacaaatgcattcgccggtgatcacgttgcg
ttgacattagcagggattgatcagcaaaacgtaggcgttggcgatattatttgtaatccg
cagaatccggtgcccgtaacaacatgctttcaagcacacgtagttatatttgcaatagcg
agaccaatcacgaaagggcttccagtggtgatgcaccaacaatctttggtacagccagca
ttcatcacgaaattaatagcgcagcttcatcgaagtaccggtgatgtgattaaaaagaaa
ccacgttgtttaccgaagaattctagcgcaatcattgaggttgcaacacaaaatccagtc
tgcatggaattatacaaagatattaagcaactaggtagagttatgttacgattagaaggt
accaccattgcagctggtttaattacaaaaattttgtaa
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