Camponotus floridanus (Florida carpenter ant): 105257953
Help
Entry
105257953 CDS
T03919
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X3
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfo03036
]
105257953
Enzymes [BR:
cfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
105257953
Chromosome and associated proteins [BR:
cfo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
105257953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
TUDOR
Helicase_C
SGF29_Tudor
Motif
Other DBs
NCBI-GeneID:
105257953
NCBI-ProteinID:
XP_019885141
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MHQKMPDIEKSASGYNGKETSQASLLQSNRSLQIQKIIKFLNHQDVIPTTVTPIKVTTIK
SPYIMRAYEIQQHTDKLDKIQRKLLSFMKTEEYLRGEYNVQNPKVGDVVIVQSSKCTVEV
ELPSFVCRGLIQYIKKQDEIYYILLVDHGISIKLTRDKFCIVPQNFIPEKYLTKAVGVFN
IMPIRMKKNVSNGSNNSKSTPIVVDEWSEEAIQFAEDLLYESKIIYFDHLHTDEKNGREY
GEFYLTINNIDIISLSEALIINYYATYIEGDLLQLVDNYSQSKENIKDHIQIKFSCNDKI
EKNRNNARQVNHAQVNYSLKEFCLNEKVLIQSTMNCGILNDVRDLGYPHGIHKGWNEYYK
SSRPRKLQSYIWPAINNGLNVVAIGPSQCGKTSGCVMSVCGLVAMRQKEVSHSATRPLAL
ILCSSSSEVINIHSLCMSFLRSFDNVKSVAAFNGKTSISIAASIYKGCQILIATPQYLAR
FLNENKNLLSFDRLSYLVLDNVDVILDKYYNSIGELFKKHKVIENRESQGDNRPTLQIII
SATTWTPEIKKFICLATYKPYICITSFLEAVIFKSIRPQLYILNSIQKNQKISDILKDDY
TTMRTMIICINAKEAEELNTFLFSTKKTLLIHEEMKLSDIRALQDSWKACVRSLYPVLIC
TDAVLSDLNFTNIQWLIHHSVQLKFKNLFNYRFSVLLDHLTQDAKKCKFSIFIDERNDQQ
FVSIIKLMERMKVVISRDLLKSCDRIAVTLEKDKKEYAICDNVKSFGFCHEKNVCVFRHY
MLPKIDAPMTNIQINDKVILMVMYIHDTTHFSARIIEYMSCTNESKKIKFCDTEYMKTAL
KIQEYYQNVENRKVCISTNVGDICALEESMDTFKRVQIVRIRYDKDSSEDKVKFVDVRCI
DSGVIHEAIDVYKLMHIPEELSNLPTHIVEIFLAGVAPPDKEYMWNHCANEAVHKWFSKN
FDERSYIIGKVCLHLGNTIWLDDLRIGTKLLGYSDMIGSSLKKELLAKNFAILNDNHMPD
LFKLCKNSDMIDINGHDINVMCK
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaaaaaatgccagacatcgagaaatctgcatctggatataatggaaaggaaaca
tcgcaagcttccttacttcagagtaataggtctcttcaaatacaaaaaatcattaaattt
ctcaatcatcaagacgttattcctactacagttacaccaattaaagtaacaactataaag
agtccatatattatgagagcttatgaaattcagcaacatacagacaaacttgataaaatc
caaaggaaattgttgagctttatgaaaactgaagagtatttgagaggggaatataatgta
caaaatcccaaagttggtgatgtagttattgtacaaagtagtaaatgtacagttgaagtg
gagttaccatcatttgtctgccgcggtttaatacaatatattaaaaagcaagatgagata
tactatattcttttagtggatcatggtattagcataaaattaactagggataaattttgt
atagtgccacaaaattttattcctgaaaaatatttaacgaaagcagttggtgtattcaat
attatgccgattcgtatgaaaaagaatgtttctaatggttctaataattcaaagtctaca
cccattgttgtagacgaatggagcgaagaagcaattcaatttgccgaagatttgttatat
gaatctaaaatcatatactttgaccatttacacacagatgagaaaaatggaagagaatat
ggagaattttatcttaccattaataacatagatatcatatcattaagcgaagctctaatt
attaattattatgcaacttatatagaaggagatttgttacagcttgttgacaattattct
caatctaaggaaaacataaaagatcacatacaaataaaattttcatgtaatgacaaaatt
gagaaaaatagaaataacgcaagacaagttaatcacgcacaagttaattattcccttaag
gaattctgtctaaatgagaaagtcttgatacagagtacaatgaattgtgggattttaaat
gatgttagagatctcggatatccacacggaatacataagggttggaatgaatattacaaa
tcttcgagaccaagaaagctccagtcttatatatggccagctataaataatggtttaaac
gttgttgctattggaccatcacaatgtggtaaaactagtggatgtgtaatgagtgtttgt
ggtctagtagccatgcgtcaaaaggaagtatcacacagcgcaactcgtccactagcacta
attttgtgctcttcatcttctgaagtaatcaatattcactcattgtgtatgtcatttttg
cgttcttttgataatgtaaaatctgtagctgcatttaatggcaagacatctatatcaata
gcggcatctatatataaaggttgtcaaatcttaatagccacaccgcaatatctagctcga
ttcttgaatgaaaataaaaatttactgtcatttgacaggctttcttatttagttcttgac
aatgttgacgtaattttagataaatattataactcgataggagaattattcaagaaacat
aaagtaattgaaaaccgtgagtcacaaggtgacaatagaccaacactacaaataattata
tcagcaacaacctggacacccgagattaagaaatttatatgtctagcaacgtacaaacca
tatatatgtatcacatcatttttagaagctgttatttttaaatctatacgtccacaattg
tatattttgaattctatacaaaaaaaccaaaaaatatcagatatactaaaggatgattat
actacgatgagaacaatgataatatgtataaatgctaaagaagccgaagaattaaatacc
tttttattttcaacaaagaaaactctgctaattcacgaagagatgaagttgtctgatata
cgagctttacaagacagttggaaagcatgtgtacgtagcttgtatccagtactcatatgt
actgatgcagttctatctgatctcaattttactaatattcaatggctgatacatcattct
gtacagttaaaattcaaaaatctattcaattataggttttctgtacttttagatcatttg
acacaggatgccaaaaaatgtaaatttagtatattcatcgatgaaagaaatgatcaacaa
tttgtaagcataataaaattaatggaacgaatgaaagttgtaatatctcgagacttattg
aaaagttgtgatcgaatagcagttacactagaaaaagacaaaaaggaatatgctatatgt
gataatgtgaaatcatttggtttctgtcatgagaaaaatgtttgtgtattcaggcattac
atgcttcctaaaatcgatgcaccaatgacaaacatacagataaatgataaagtgatattg
atggtgatgtatattcacgatacgacgcatttctctgcaagaataatcgaatacatgtca
tgtacaaatgagtcaaaaaaaataaaattttgtgacacagagtatatgaaaactgcactt
aaaatacaagagtattatcaaaacgttgaaaacagaaaagtatgtatctcgacgaacgtg
ggtgatatctgtgctttagaggaatctatggacacatttaaacgagtacaaattgtgcgt
atcagatatgataaagatagttctgaagacaaagtaaaatttgtagatgtgagatgcatc
gatagtggtgttatacatgaagccattgatgtatacaaattaatgcatattcctgaggaa
ttatcaaatcttccaacacatattgtagaaatatttttagctggtgtagcaccacctgat
aaggaatacatgtggaatcattgtgctaatgaagcagttcataaatggttctcaaaaaat
tttgatgaaaggtcttatattattggaaaagtttgccttcaccttggaaatacaatttgg
ttagatgatcttcgaattggaacaaaattacttggttattccgacatgataggatcttct
ttgaaaaaggaacttcttgctaaaaattttgcaattttgaatgacaatcacatgccagat
ctgttcaaactttgcaaaaacagtgatatgatagatatcaatggacatgacattaatgta
atgtgcaaataa
DBGET
integrated database retrieval system
