Camponotus floridanus (Florida carpenter ant): 105258021
Help
Entry
105258021 CDS
T03919
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105258021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfo04131
]
105258021
Membrane trafficking [BR:
cfo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
105258021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
DUF3896
FerA
Motif
Other DBs
NCBI-GeneID:
105258021
NCBI-ProteinID:
XP_011267365
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MVSLFFSQPMTPAITGMEEQEKLLEDAIGVVKVQAFQMKHCLDKAKLMDALKHASTMLGE
LRTSLLSPKSYYELYMAITDELRHLELYLLDEFQKGRKVTDLYELVQYVGNIVPRLYLLI
TVGLVYIKTTPGLKRDLLRDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDVTEGDDEDG
TVRDSIDFVLMNFAEMNKLWVRMQHQGHSRDRERREREREELRILVGTNLVRLSQLESVT
LDKYKKLVLPGILEQVVSCRDAIAQEYLMECIIQVFPDEFHLQTLNAFLKSCAELQNGVN
VKNIIISLIDRLAAFSQRSDGVGGPGSPNQVSGIPQDVKLFDVFSDQIAIIIQTRQDMPP
EDIVSLQVALINLAHKCYPDRVDYVDKVLFTTVQIFQKQNVDKLEYNSAVSRELVRLMKI
PVDNYKNILTVLKLEHYAPLLDYFDYEGRKSLAIYIITNILENETLIPMQEQVDAVLSMV
APLVQDQPDQPNIEEDPEDFAEEQGLLGRLIHHFKSETPDQQYMILSAARKHFSAGGNKR
IKYTLPPIIFQSYQLAFTYKALKDQDEMWQKKCQKIFQFCHTTITALMKAELAELPLRLF
LQGAIAIGEIRFDNFEMVAYEFMSQAFSIYEDEISDSKAQLAAITLIIATFEQMSCFGEE
NAEPVRNQCALYASKLLRKPDQCRGVATCSHIFWSGKSLATGGKEMQEGGKVLDCLKKGI
RIASQCMDTSVQVQLYVELLNHYIYFYEKGNTAVTVQILNQVIAKIREELPNLEASEETD
QIQKHLANTLEHLRNRMESADSDGLSYQGLVL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggtatctttatttttttcgcagccaatgacacctgccataacaggaatggaggagcaa
gagaagttgttggaagatgctatcggggtggttaaagttcaagcttttcagatgaaacat
tgtttggacaaagctaaactgatggatgcgctaaaacatgcctccactatgttaggagaa
ctgaggacttctcttcttagtccaaagagctattatgagttgtatatggcaataacagat
gaactacgacacttagaactttatttgttggatgaatttcaaaaaggaagaaaggttaca
gatctttacgaattagtacaatatgttggcaatattgtaccaagactctacttacttatt
actgttggtttggtttatatcaaaacaactcctggtttaaaaagggatcttttaagagat
cttgtagaaatgtgcagaggtgtacaacatccgttacgtggtttatttttaagaaattat
ttgctacaatgcacaaggaacattttaccagatgtcactgaaggtgatgatgaagatggg
accgttcgtgacagcatagattttgttctgatgaattttgcagaaatgaataaattatgg
gtacgcatgcaacatcaaggtcatagtagagatagagaaagaagagaaagagaaagggaa
gaacttagaattcttgtgggaacaaatcttgtacgacttagtcaattggaatctgtaaca
ttggataaatataaaaagcttgtactaccaggaatattggaacaggttgttagctgtaga
gatgccatagcacaggaatatcttatggaatgtataattcaggtctttcctgatgaattc
catttacaaacattaaatgcattcttaaagtcttgtgcagaattgcaaaatggagtgaat
gttaaaaatattattatatcattaatcgatagacttgcagcctttagtcaaagatctgat
ggcgtaggaggaccgggaagtcctaatcaagtctcaggaattccacaagatgtcaaactt
tttgatgtatttagcgatcagattgctattattatacagacaaggcaagatatgcctcct
gaagatattgtatctcttcaagtagctctcataaacttagcacataaatgctatccagat
cgggtagattatgtggataaagttttattcacaacagttcaaatattccaaaaacaaaat
gttgataagctggaatataatagtgccgtttcaagagaactagtaagattaatgaaaatt
cctgtagataattataaaaatatattaactgtgcttaaacttgagcattatgcgcctctt
ttggattattttgattatgagggtagaaaatcgctagccatatacataatcacaaatatt
ttggaaaacgaaacattgataccgatgcaagaacaagtggatgcagtgctctctatggta
gctccattggtacaagatcagccggatcaaccaaacatagaagaagatcctgaagatttc
gctgaggaacaaggtctgcttggcagactaatacatcatttcaaatcggaaacgccggat
caacaatatatgatattaagtgctgcaaggaaacatttcagtgctggtggtaacaaaaga
attaagtatactttgccgcctataatctttcaaagttatcaattggcctttacatataaa
gcattgaaagatcaggatgaaatgtggcaaaaaaaatgtcaaaaaatttttcaattctgt
catacgactatcactgcactgatgaaggctgaattagccgaattacctttgagactattt
ctgcaaggtgcaatagcaatcggcgaaatccgttttgataattttgagatggtagcttat
gaatttatgagtcaagcattttcaatatatgaggatgaaataagcgattcaaaggcacag
cttgcggcgatcactttgatcattgctacgtttgaacaaatgagctgttttggtgaagaa
aacgcagaacctgtgcgtaatcaatgcgctttgtatgctagtaaattattgagaaaacct
gatcagtgtagaggagtcgctacttgttcacatatattttggtcaggaaaatctttagct
acaggtggaaaagagatgcaagaaggtggtaaagtattagattgcttgaaaaaaggtatt
aggatagcgagccaatgcatggatacatcggtgcaagtgcaattgtatgtagaactgctg
aatcattacatttacttctacgagaaaggaaatactgctgtgactgtgcaaatattgaat
caagtaattgcaaaaattagagaagagcttcctaatttagaagcaagtgaggaaactgat
caaatacaaaaacatttggcaaatacattggaacatttaagaaatagaatggaatcagca
gactctgatggactttcttatcaaggccttgttctttaa
DBGET
integrated database retrieval system
