Camponotus floridanus (Florida carpenter ant): 105258203
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Entry
105258203 CDS
T03919
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105258203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105258203
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105258203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
105258203
NCBI-ProteinID:
XP_011267634
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MADENEDQWLYGDSTDGKEYVNIPSEIQQNDSTKTQEKSQIPEDLKMEGINETPPEMQDI
DFPVEGHEESSLLNNVQEENNMDTNKNGIREASSQEDGEAASDSDSDDDVHVVIGDIKST
PAYGSLNIKRGGLLTNASGVPDKLSKQPGKFSIDEFETIGVINGIPAHEYNLDQLEDKPW
RQPGADITDYFNYGFNEETWRAYCERQKRMRSESGVGLILNAGGSGGNPGSMRVPQVAIT
NDNSKYSGIMGPKRAGPPPGRKMAGTIDVIGSSGLASRRNLDKSPPKGNVIQVMTADRRE
YSRKPGFPDMSVPPPGAGMPPPFDMPPPGYAGEPAPFYMPETDPYYQSYEPTQDNQWGND
PTWQPTNLAIPMTEGEDDKDMGPKTIPTMVPPTSIPPLMQPRDQRDGRDRERDRDRDREL
DSMGRDRDRDKDRDRDRDREKDSMIRDRDRDRDSMTRDEDRERDRSRSQYRHKDRHRHRS
RSRSRRHKSRSRSPSRRKKKSRRSDRERSKEESE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaaaacgaagatcagtggttgtatggggattctaccgatggaaaggaatat
gtcaatataccgtcggagattcaacaaaatgattcgacaaaaacacaagaaaaatctcaa
attccagaggaccttaaaatggagggaattaatgaaacaccgcccgagatgcaggatatt
gatttccctgttgaaggtcatgaagaatcctctttattgaataatgtacaggaagagaat
aatatggatacaaataagaatggaattagagaagcttctagccaggaggatggcgaagca
gccagtgattccgattctgatgatgatgtacatgttgtgattggcgatatcaaatcgaca
ccggcatatggtagcttaaatatcaaaagaggaggattgctgactaatgcatctggtgtg
ccagataaattgagcaaacagccaggaaagttcagtatagatgagtttgagactattgga
gttatcaatgggataccagctcatgaatataatttagatcaattagaagataagccgtgg
agacaacctggtgcagatatcacggattatttcaactatggctttaatgaggaaacctgg
agagcgtattgcgaacgtcagaaacggatgcgaagtgaatcaggagtgggattgattttg
aatgcaggaggtagcggtggtaatcctggcagcatgagggtacctcaagtggcgataacc
aatgataacagtaaatactcaggtattatgggtcctaaaagagctggtccaccgccagga
cgaaaaatggcagggactatagatgttattggaagttctggtttagcttcccgaaggaat
ttggataaatccccgccgaaaggaaatgttatacaagtcatgacggccgataggagagaa
tattctagaaagccaggttttcctgatatgagtgtaccacctcctggagcagggatgcca
ccaccgtttgatatgcctccaccgggatatgccggagagccagcgccgttctacatgccg
gaaactgatccatattatcagagttatgaacccacacaggacaaccagtggggtaatgat
ccgacatggcaaccgacaaatctggcaatcccgatgaccgaaggtgaagacgacaaagat
atgggacctaagaccatacccaccatggttccaccaacatccattcctcctttaatgcaa
ccacgcgatcaacgggacggcagagatcgagaacgagacagggacagagatcgagaattg
gattctatgggcagagatagggatagagacaaagatagagatcgtgatcgcgatagagaa
aaagactcaatgataagggaccgtgatagagatagagattcgatgacgcgagatgaagat
cgagagcgtgataggtccagatctcagtatcgtcataaagatcggcatcggcatcgatca
aggtcacgatctcgtagacacaaatcaagatcgcgaagtccgagccgacgtaagaagaaa
tccagacgctcggatagagaacgttctaaggaagaaagcgaataa
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