Camponotus floridanus (Florida carpenter ant): 105258329
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Entry
105258329 CDS
T03919
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfo04121
]
105258329
Enzymes [BR:
cfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105258329
Ubiquitin system [BR:
cfo04121
]
Ubiquitin ligases (E3)
U-box type E3
105258329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-CCHC_2
zf-CCHC
zf-C3HC4
U-box
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
105258329
NCBI-ProteinID:
XP_011267839
LinkDB
All DBs
Position
Unknown
AA seq
1950 aa
AA seq
DB search
MSVHYKFKSTLDYDTVSFDGLHISVADLKKAIFHQKRIGKNTDFDLQITNAQTKEDYTDD
NALIAKNTSLIVARVPLTIQQKRSWDRNETPPFSNLKDEANMNRAVDLTRLDGSEEDKIR
AMMTQSTQDYDPSNYMKIRGANQTGDVPANYRCYKCHQPGHWIKNCPLGTNQEPIEIKKS
TGIPRSFMVPVEGPLVPGAMMTPTGHYAVPAIDHQAYKEGKKERPPFSQDPEPVIEKPEI
PEDLLCNICKDLLTDAVMIPCCGNSFCDECIRTFLLESEEHECPDCNEKDVSPETLIPNR
FLRNAVMNFKNETGYAKRQTYRPPIQSSGQSAAPTDQSKVEVQQTMSQVSSQAQTIQPSV
APNVPSQESVEPQSTNLESASQHFPTAISGLQPQTSTTLPESTSESHLQSDSVTKLTTDE
ETEVPPPPGTEPLLPIPAIVSSPERERERSDPPSRDKKERENEYIGERQSRERRRSFSRD
GHRERSGERGRRIENLRPLNRSRNRSLSPRHSQHGEYPSSSSAVLPHLMNPPPSKGYQGH
LADDGHYPPAMHYDSGIRRSNEDRAGTPTVDEPHLHVPTSGNQPPLLPFPPGEDRIPPPN
YNQPPPNVPPHNPPLLPDPYLNHRIPIYPHQQSSHYGPPRYDRPPYQQQGYRPSQPPRNY
NGPPRPMRGLHHMGYRNLQPPPPGLGRSIHNGNQPGIIDDPLEAFERMLREKDERDRRLG
KHRRRSRTRSRSRSYTRSRSRSFSRRSPFASRISRSRSPPSKRRSSRSPLPLRPRSRTPK
RRSRSGSFSISRSRSYSRSQSPRLSPSRDRDRERDRDRERDRERDRDRERDRERDRDRDL
LPRYRSPVRSPPRFQRERDRERDRPRSREPRDGYGTYYGDSPAHDYQFRDRERDLPPRER
PLPRYPIRNQPSQHNIPPLMSHLVTGGHPPPPLMSLGPPPTDRKDYYDSYNRYSGPPPSQ
RFGSPLRDPPPHKRFEDVAPPGTEGYYDLSPPGVEHSDRSLREDRERQRSLRDQEDREHS
SKDRDNEERDRLRDDRGRDREDRMRERDDRDRRIVNRDREDRDRQIPPRDHEDRIREKDE
RDRREKEKERDDRHIRDRRDDDRHIEKKDYDKDRYRDDRDRHRQDDKSRLREKERREREY
ESEREKDRDRHERYERRSLERKKGRKSLSPYSQKSRGDPKDLSPERSTKKKEKEHEEKVE
EKKKEKKIKEKKKKKDSDEKEKKKKKKKDKKSSQKETPKDDTIKMEDALLVEDKTTNDTS
SSPLNKLDAVKTCNEEDNIENRIECIASEAPIVPIKEEFEDKSLAMNPEPPEFNELSPGS
GRLDRAEFGTNPPNPNFKPIPELKSDIKPIDSLYGGLDDTEINTVITEKYSLLSEHSQTE
TKEVTTMLSTEKSPKKDEFLAPIPELSKWERDDTIEKPDDNNTSESPTEKIQREDEPKSM
KMVTSEVLKRAENAIFQKAINAIRPIEIKKISESRKILYQNPEPKVLETVEPTPNREPRK
SVNVTINVGRNERNVEITEPVKKAKLDRTKFKPVPETAYSPTRLSAKERLGEKIEEGKER
KISPVKGFLERRDMKSENQSRSRSPRREKRISPTLLERRVEPSSLGLATSGERKVYLDER
KRDNKDRGDRSKERSDFRGDRHGGDLRSERESRIDCRTDFRSNRNDMKGERVEKDRDKER
DRERRGRTPPPSCAFKRTDMTKISLLKSKDDEEERRRDKKPREEKKRKKEHRSRSKSKEH
KKRKEKKHKKDKDKNQEKKQKHKEGATSKDGKSDGNETKINYENIEPPLAESLKKQRKNP
RLVSDRKRSILDEASFEPDYSASDSESDGEDGKGLQPAKKLKLDETELDKEIEMKSLKKR
SKSSSSEDTSSSSDTTSSDSDSSDESHKKKKKKHKKHKKKKSAKKDSSSDSDTYSDSSDS
SSDEEKHKKKSKKSKSRSKQSKKKKKSKHK
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtacattacaagtttaaatctactttggactatgacactgtatcatttgatgga
ctacatatttcagtggcagatttgaaaaaagctatatttcatcagaaacgtatcggcaaa
aatacagattttgatttacaaattacaaatgctcaaacaaaagaagattatacggatgat
aatgcattaattgctaaaaatactagccttattgttgcaagagttccattaacaatacaa
caaaaacgctcttgggatcgaaatgaaactcctccatttagtaatttaaaagatgaagct
aatatgaacagagctgtagatctcacaagattagatggttcagaagaagataaaattcgt
gcaatgatgacacaatcgactcaagactatgacccttcaaattatatgaaaattcgtgga
gccaatcagactggtgatgtacctgcaaattatcgttgttataaatgccatcaacctgga
cactggataaaaaactgtccattgggtacaaatcaagaaccgattgaaattaagaaaagc
acgggtattcccagaagttttatggtacctgttgaggggcctttagtacctggtgctatg
atgacacctacaggacattatgctgttcctgctattgatcatcaagcttataaagaaggc
aaaaaagaacgaccaccattttcacaagatccagaacctgtgatagaaaaaccagaaata
ccagaagatttattatgcaatatatgcaaagaccttctaacagatgcagtgatgattcca
tgttgtggaaattccttttgtgatgaatgtattcgcacatttctattagaatctgaagaa
catgaatgtccagattgtaatgaaaaagatgtatcaccagaaactcttattccaaatcga
ttcctacgtaatgcagtaatgaattttaaaaatgaaactggttatgccaaaagacagact
tatcggcctcctattcaaagtagtggacaatctgctgcaccaacagatcaatcaaaagtt
gaagtacaacaaacaatgagtcaagtatcttctcaagctcaaacaatacaaccgtctgtt
gctcctaatgtaccatcacaagaatctgtggaaccacaatccactaatctcgaatctgcc
tcgcaacattttccaactgccatctctggtttgcagccacagacatcaaccactctgcct
gaatccacttcagaatcgcatttgcaaagtgattcggtaacaaaactaacaactgacgag
gaaactgaggtgcctcctcctccagggacagagcctttacttccgattcctgctatcgta
agctcgccggagagggaacgcgaacgaagtgaccctcctagtcgtgataagaaagaacgg
gaaaatgaatacatcggggagcgccaatcgagggagcgtcgacgaagctttagcagagat
ggacatcgtgagagaagtggagaacgtggtcgtaggattgagaatttacgtccattgaat
cgcagccgaaatcgatccctgtcacctagacattcccagcacggtgaatatccatcgtca
tcgagtgcggtgttgcctcatttaatgaacccacctccctccaagggttatcaaggtcat
ctagcggacgatggacattatccgcctgctatgcattatgacagcggaatacgtagatct
aatgaagaccgcgcgggtactccaacggtcgatgaaccgcatttgcatgttcccacatcc
ggcaatcaaccaccgttattaccgtttccaccgggcgaggaccgtatcccgccaccgaat
tacaatcaaccaccgccgaatgtacctccgcacaatcccccacttttgccggatccgtat
ttaaatcatcgaataccgatatatccgcatcagcagagctctcattatggaccgccgaga
tacgatagacctccttaccagcagcaaggatatcgaccgtctcagccacctcgaaattat
aacgggccaccaaggccaatgagagggctgcatcacatgggatatagaaacttgcaacca
ccaccaccaggtttaggtagaagcatacataatggaaatcaacctggtattatcgatgac
ccattggaggcatttgagcgtatgctcagagagaaggacgaaagagatcggcgtttggga
aaacatagaagaagaagtagaacacgatctagatctcgtagctacactcgatcgagatcg
cgctctttcagtcgcagatcgccatttgcgtctcgtattagtcgatcacgtagtccaccg
tcgaaacgaagatcatcgagatcaccattgccacttagaccacgtagtcgtactcctaaa
cgtagatcacgaagcggaagcttctccattagcagatctagatcatactctcgcagtcaa
tcgccgaggctatctccatcgagagacagagatagggaaagagacagagatcgagaaaga
gacagagagagagatcgtgatcgcgagagagaccgcgagcgagatcgagatcgtgacttg
ttgcccagatatcgatcgccagttagatcacctcccagatttcaaagagagagggatcgt
gagagagataggccgcgatcacgtgagcctcgagatggatacggtacttattatggcgat
tcaccagctcatgattatcaattccgtgatcgtgagcgcgatttaccgcctagggagagg
ccattgccgagatatcccataaggaaccagccgtcccaacataatataccgccgttgatg
tcacatctagtcactggaggtcatccaccaccgccgcttatgtcattgggacctccgcct
acggacaggaaagactattatgattcctacaacagatattctggaccacctccttcacag
cgtttcggtagtcctctgagggatcctccgcctcataagagattcgaagatgtcgcacca
cctggtactgaaggctattacgatctctcaccaccgggcgtcgagcattccgacagatcg
ttgagggaagatcgagagcggcagcgttccctgagagatcaagaagatcgagaacattcg
tcaaaggatcgtgacaatgaagagcgtgacagattaagagatgataggggtcgcgatcgt
gaagatcgtatgcgcgagagagatgacagagatcgtagaatcgtgaacagagatcgcgag
gatcgcgatagacaaatcccgccgagagatcacgaagacaggatacgagaaaaagatgaa
cgtgataggagagaaaaggaaaaagaacgagatgatagacatattcgcgatcgtcgagat
gatgatagacacattgagaagaaggattatgataaagatcgttacagagatgatcgagat
cgccatagacaagatgataagagccgactgcgagagaaggaaagacgcgagcgcgaatac
gaatccgaaagggagaaggatagagatcgtcacgagcgatacgaaagacgttcgctagag
cggaagaagggcagaaagagtttaagcccgtattcgcagaaatccagaggcgatcctaag
gatttatcgccagagcgaagtacaaagaagaaggaaaaggaacatgaggaaaaagtggaa
gaaaagaagaaagaaaagaaaataaaggaaaagaaaaagaagaaagatagtgacgaaaaa
gagaaaaagaagaaaaagaagaaggacaagaagtctagccagaaagaaacacccaaggat
gatacgatcaagatggaggatgcactattggtcgaagataaaacgacaaatgacacctcg
tcttcgccacttaataaacttgatgctgtgaaaacatgcaacgaggaggacaacattgag
aacaggatagaatgtatcgcgagtgaggcacctattgtaccaatcaaagaggaattcgag
gataaatctctggcgatgaatccagaaccgccagaattcaatgagctcagtcccggcagt
ggtcgtcttgatcgcgcagaatttggtactaatccaccgaatccgaatttcaaaccaatt
ccagaacttaaatcggacataaaaccaattgatagtctctatggcggactggatgacacg
gagatcaacactgtgatcacagaaaagtattctctattatcggaacattcgcagactgag
acgaaagaagtaaccaccatgttatcaacagaaaaatccccgaaaaaggatgaattcctg
gctcccatacccgagttatccaagtgggagagagacgacacaattgaaaagcccgatgac
aataatacgagtgaatcaccaacggagaaaatacagagagaggacgaaccgaagtcaatg
aagatggttacttcagaggttctaaagcgagcagaaaatgccatatttcagaaagctatc
aatgcgattcgaccaatcgagattaagaagattagcgaaagtaggaagatattatatcaa
aatcccgaacctaaagtattagaaacggtagaaccaacccctaaccgagaaccgcgaaag
agcgtcaatgtaacgattaatgttggcagaaacgagagaaatgtcgagatcacagagcca
gtaaagaaagctaagcttgaccgtaccaagttcaagcccgttccagagacagcttattca
ccaaccaggctgtccgccaaagaaagactaggtgagaagatcgaggagggtaaagagaga
aagatcagccctgtaaaaggatttctagagaggcgcgacatgaaaagtgagaatcagtcg
agaagtcgatcacctagaagagagaagaggatttctcctacgcttctagaacgacgtgta
gagccatcttcgttgggtttggctacaagcggcgaacgaaaggtatatctggatgagaga
aaacgggacaacaaagatagaggcgaccgatcgaaggaaaggtctgattttcgaggcgac
aggcacggtggcgatttgcggtcagagagagagagtagaattgattgtaggacagatttt
cgctcaaatagaaatgatatgaagggggaacgcgtggaaaaagatcgcgataaggagcga
gatcgtgaacgcagaggtagaacgcctcctccgtcttgcgctttcaaaagaacggatatg
acgaaaataagtttattaaaatcgaaagatgacgaagaagaaagaagacgtgataagaag
ccgcgagaagagaaaaagaggaaaaaggaacatcgtagcagaagtaaatctaaagaacac
aaaaagcgcaaagaaaagaaacataagaaagacaaagataagaatcaggaaaagaaacag
aagcacaaggaaggtgcaacttcaaaagatggaaagtcagatggcaacgagaccaaaatc
aattacgagaatatcgagccgcctctggcagagtcattgaagaaacagagaaagaatcca
agattggtatccgatcgcaagcgtagtatacttgacgaggcgagtttcgaacccgattac
tctgcctcggactcggaatcagatggtgaggatgggaaagggttgcaaccagcaaagaaa
ctgaaattggacgaaacggaattagacaaagagatagaaatgaagtccttgaagaagcga
tctaagtctagtagtagtgaggatacatccagcagttccgacacaacaagcagcgactcg
gacagtagcgatgagtcgcataagaagaagaaaaagaaacataaaaaacataagaaaaag
aagtcagctaagaaagatagtagctcagactcggacacttattcggactcgtctgacagc
agtagcgacgaggagaaacacaagaagaagtcaaaaaaatcaaagagcaggagcaagcaa
tcgaagaagaagaaaaaatctaagcataaatga
DBGET
integrated database retrieval system
