Camponotus floridanus (Florida carpenter ant): 105258336
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Entry
105258336 CDS
T03919
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105258336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfo03021
]
105258336
03041 Spliceosome [BR:
cfo03041
]
105258336
03036 Chromosome and associated proteins [BR:
cfo03036
]
105258336
Transcription machinery [BR:
cfo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105258336
Spliceosome [BR:
cfo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
105258336
Complex B
105258336
Complex C
U2 SnRNP specific factors
105258336
Chromosome and associated proteins [BR:
cfo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
105258336
TFTC complex
105258336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
105258336
NCBI-ProteinID:
XP_011267849
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGATKDYIVVGSDSGRIVILEYIPAKNMFDKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFDNP
MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDT
PQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKEADNSEDSAPQQ
SSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSW
LSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LEYTPRKFAIHTDSAHLVIIETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAAVARELAE
AFLSEEPNEAVFGAPRAGPGLWASMLRIMAPTTGQTFEVHRFEQNLAALCLCLVKFANQG
DQLFLIVGVAKEFQLNPRVSNGGFLYTYKVNTECTSIELLHKSPLDEVPLAICPYQGRVL
VGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQ
LIVFADDTHPRFITTTCVLDYDTVATADKYGNIAVIRLATGINDDVDEDPTGNKALWDRG
LLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF
FQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPVKQKSISGDLERT
PSEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtacaatctgaccctacaacgcgccaccggcatcactcacgcggtgcacggg
aacttctccggcagcaagatgcaggagatcctcgtctctcgcggcaagtcgctggagctg
ctgcgaccggacccgaacacggggaaggttcacactctgctgactgttgaggtttttggc
attatcaggtctctgatggcattcagattgacgggagcaacgaaagattatatcgttgtt
ggttcggattccgggcgcatagtaattttggaatatattcctgccaagaatatgttcgat
aaggtacatcaagagacctttggcaagagtggttgtagacgcattgtacctggccagtat
ctagccattgatccaaaaggcagagcagttatgataggtgctattgaaaagcagaaactc
gtgtatatcctaaacagagatgcagaagcccgtttgacaatctcttctccattggaagct
cataagagcaacacactagtatatcacacggttggcgtcgatgttggctttgataatccc
atgtttgcatgtttagagatcgattatgaggaagcagacagcgatcctacaggtgatgca
gcggtgaagacgcagcaaactttgacgctgtacgagctcgatctcggtctaaatcacgta
gtgcgaaaatacagcgagccactggaagaacatgctaactttcttgtatctgtgccgggc
ggcaacgatggtccaagcggtgtactaatttgctccgaaaactatctcacctacaagaat
ctcggtgatcagcacgatattcgttgtccgatcccacgacgtcgtaacgacctggacgat
cccgaaagaggaatgatatttgtgtgttctgctactcacaagacaaaaagcatgttcttt
ttcctggcgcaaacagaacaaggggacattttcaaaatcactctcgagacagacgaggac
atggttactgagatcaagctcaagtacttcgatacggtacctgttgcagcgagtatgtgt
gtcctgaaaacgggtttcctgtttgttgcctcggaatttggcaatcattacctctatcaa
atagcgcatctcggcgatgacgacgatgaacccgaattcagctcagcgatgccgctcgag
gaaggcgataccttcttcttcgcgccacgaccgcttcgaaatttagtgctagtcgatgaa
atggacagtctctcacccataatggcttgtcaggtggcagatttggcaaacgaagatacg
ccgcaattatacattgcttgtggtcgaggaccgcgatctacgctgcgcgtgctacgccac
ggtctcgaggtttctgaaatggccgtgagcgaattgcctggtaacccaaatgccgtatgg
accgtgaaaagaagaatcgatgaggaatatgatgcatacatcatagtgtccttcgtgaat
gccacgctcgtactcagtatcggcgagactgtcgaggaagtgacggactcgggttttctt
ggtacgacaccaaccttgagttgctcagcattgggcgaggatgcattggtgcaggtatat
cctgacggtatacgtcacatccgtgcagataaacgtgtcaatgaatggaaggctcctggc
aagaagaccatcgtaaagtgcgcggtaaatcaacgtcaagttgtgatcgctctcactgga
ggggaactcgtctactttgaaatggatcccactggacaattgaatgaatatacggaaaga
aagaagatgccatcagaagtaatgtgcatggctctcggaaatgttgctgtgggcgaacaa
cgctcgtggttccttgccgttggcctacaggataatacagtgaggataatatcattggat
ccctcggactgtttagcaccgaggagtatgcaagcgttaccggctgctgcggagagtcta
tgtatcgtggaaatgggtgcaaaggaggccgacaattccgaggattcagcgccacaacaa
tccagtttgtatttaaacataggtttgcaaaacggcgtattactcaggacagtattagat
ccgatttctggcgatctcgcggatacgagaacacgctacttgggttcccgtcctgtcaag
cttttcagaatacgtatgcagggtaatcaagctgtattggcgatgagcagtcgatcgtgg
ctgagttactatcatcagaaccgctttcatcttacgcctttgtcgtacgagagtttagaa
tttgcatctggcttcagttctgaacagtgtccagaaggtatcgtcgccatatcgaccaat
accttgaggattctggcactcgaaaaactcggtgccgtattcaatcaagtgagctttccg
ctggagtatacgccgcggaagtttgccattcacaccgattctgcgcacctagtaatcatc
gagaccgaacacaacgcttacacggaagagacgaagcaacagagaagattacaaatggcg
gaggaaatgcaggaagcagccggcgctgaggaggctgctgtcgcccgtgaattggcagaa
gcgttcctatcggaggagccgaatgaggcagttttcggtgccccgcgtgcgggaccaggc
ctttgggcctcgatgctgagaataatggcaccgactactggccaaacattcgaggtgcat
cgtttcgagcaaaatctagctgcattatgtctctgtctcgtgaagtttgccaatcaagga
gatcaactgttcctcatcgttggagtcgcaaaagagtttcaattaaatcccagagttagc
aacggcggtttcctttatacatacaaagtaaatacggagtgtactagtatcgaattgttg
cacaaatctccgttggacgaggtaccattggccatttgtccgtatcagggccgagtactg
gtcggcgtaggcaggatgctacggctttacgacatgggtaaaaagaagttattgcgcaag
tgcgagaacaagcatatacccaatgccgtggtctcgatcaacgccatcggtcaacggatt
tacgtcagcgatgtgcaggagtccgtatacgccgtgagatacaaacgccaggagaatcaa
ttaatcgttttcgcagacgatacacatcctagatttatcacaaccacgtgcgtgttggat
tacgatactgttgctaccgccgataaatatgggaacatagctgtgatacggttggcgacc
ggtattaacgacgacgtggacgaggatcctacagggaataaggctctgtgggatcgagga
ttgctgaacggcgctagccagaaagcggacacggttgcgtgttttcacgtaggcgagacg
gtaatgtccctgcaaaaggcgactctcatacccggcggttccgagagtttggtctacacg
actctcagcggaacggtgggcgttctcgtgccgttcaccagtcacgaagatcacgatttc
tttcaacatctggagatgcacatgcgatccgagcacccgcccctatgcggtagggatcat
ctgtccttccgatcgtattattatcctgtgaagaacgtcatcgatggcgatctctgcgag
caattcaattcgatcgaacccgttaagcagaagagcatctctggcgatctcgagagaaca
ccgtctgaagtgtcgaagaaactggaagacatacgtacgcgttacgcgttctaa
DBGET
integrated database retrieval system
