Camponotus floridanus (Florida carpenter ant): 105258484
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Entry
105258484 CDS
T03919
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03013
Nucleocytoplasmic transport
cfo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105258484
03015 mRNA surveillance pathway
105258484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105258484
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105258484
mRNA cycle factors
P-body specific factors
105258484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
105258484
NCBI-ProteinID:
XP_011268051
UniProt:
E2B289
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MTEETQQQTEGAAQNDSCSAQQNETQINSADIGKVKDNKKEKCRPMTKVVIRRLPPTMTQ
DQFLEQVSPLPEHDHLYFVKADMSLGQFAFSRAYINFIDQQDIFMFREKFDNYVFIDSKG
VEYPAVVEFAPFQRLPKKRVGKKKDLKCGTIESDLYFINFLEGLKNQEVDSSVTQSKTEY
SYQPPDNTAKKITTTPLLEYLKLRKQEKQRLRDEKREERRRRDIEKRRTRDDPVISKVLR
NPDLDKDSSKDDKENKEERDKLSPKELKNRHKRDEKIREKLSRDREIKPIIKGYRERIDD
RNKEIKHRRYDEKRPYGRRDDREGVREERRFDFKDDRRYEAKEEFRESRDRKVEERRGKS
YEKMRQEKKKLAETKKQIVDINGDDVNSKKIKEDYDIVREKEDGNGKESVHKEDEFKHAG
DNECTQHDTAEDRVTVDAMRNCEDETGEEGNGSSNPDANDEDESEEKESKVVKRRNSLES
GGEGGAGDGSCLRRHKSLDGDGESNLQKNEEKEKDKKDPRLERRIRNKDRPAMEIYRPGM
GKFSKQRLEREKSNNDERASLSQSPTPNPNTSSSVTGKSGKSGATEVRSMTFKRSVTRDA
V
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagaaacgcaacagcagaccgagggtgctgcgcagaacgatagctgttccgca
cagcagaacgaaacgcaaatcaattcggcagatatcggaaaagtcaaagacaacaaaaag
gaaaaatgtcgtcctatgacaaaggtggtgatcagaagattgcctccgacaatgactcag
gatcaattcttggagcaagtgtcaccattgccggaacatgatcatttgtacttcgtgaaa
gccgacatgtcgctcggccagttcgcgttttctcgcgcttatattaattttatagaccaa
caagatatctttatgtttcgggagaagtttgacaattacgtctttatagattccaaggga
gtggaatatcccgcagtagtagaattcgcgccttttcagagattaccaaagaaacgagtc
ggcaagaagaaggatctcaaatgtggcactatcgagagcgatttgtattttataaacttc
ctggaaggtttaaagaatcaggaggttgattcaagtgtaactcaatcgaaaactgaatac
tcttatcaaccaccagacaatacagcaaagaaaatcacaacaactccactacttgagtat
ctgaaacttcgtaaacaggagaagcaacgtcttagggatgagaaacgtgaggaaagacga
aggagagatatagaaaaacggagaacgagagatgatcctgttatttctaaggttttaaga
aatccggacttagataaagactcgagtaaggacgacaaagaaaataaagaggagagagat
aaactttcgccaaaggaattgaagaataggcacaaaagagatgaaaaaataagagaaaaa
ttatcgcgagaccgggagattaaacctattattaaagggtatagagagcgaatcgatgat
agaaacaaggaaataaagcatcgacgatatgatgagaagaggccttacggaagacgtgat
gatcgagagggagtaagagaggagagaagatttgattttaaagatgacagaagatacgag
gcgaaggaggagtttagagaatctagagacaggaaggtggaggaaagacgcggaaagagt
tacgagaaaatgagacaagagaagaagaagttagctgaaacgaagaaacagattgttgat
attaatggagatgatgtgaattcaaaaaagataaaagaggactacgatattgtacgagag
aaagaagatggaaatggcaaagaatctgtgcataaggaggatgaattcaaacatgccgga
gacaacgaatgcacgcaacatgatactgccgaggatcgagtaacagtggacgcgatgcga
aattgtgaggatgaaactggagaagagggaaatggttcatctaatcctgatgcaaacgat
gaggatgaatctgaggagaaagaatcaaaagtcgtgaagaggcgaaattcgctcgaaagt
ggcggcgaaggtggtgcaggcgacggtagctgtctgcgacgtcacaaatcgttagatgga
gatggtgaaagtaatttacagaaaaatgaagaaaaagaaaaggataaaaaagatccacga
ttggaacgcagaatacgaaataaggatcgtccagcaatggagatatatagacccggcatg
ggcaagttcagtaagcagcgactagaacgtgaaaaatccaacaacgatgaacgagcatct
ctttcccaaagtccgacgccaaatccaaatacttcttcctccgtgactggcaaatccggg
aaatctggagcgacagaagtacgctcgatgacattcaaacgcagtgtcactcgtgatgca
gtgtaa
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