Camponotus floridanus (Florida carpenter ant): 105258926
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Entry
105258926 CDS
T03919
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfo03041
]
105258926
Enzymes [BR:
cfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105258926
Spliceosome [BR:
cfo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105258926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
MOEP19
KH_KhpA-B
KH_2
CMS1
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
105258926
NCBI-ProteinID:
XP_011268812
UniProt:
E2A0G5
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MSHRWESNRTSSRYDQSSQRYDQNSSQRYDQNSSQRYDQNSSQRYDQNSSQRYDQNSSQR
YDQNSRNWGGTNRDRRDSQRHYNRSSSDNWNSDSNTQIYSNSSRKRSNDDSNDTNELVMY
IDANNVGRLIGKGGSKIKALQDESNAKINIDKQSSENGQTAVKLIGTDEAQQRAKNLIEE
LLIDRNISHQNVESDQRRETNFEQKKQEIDWNSFDWTKANEEYENRQKERWATLPPIIKN
FYKEDPAVANMSKAKIAELKKINNNIEVKYVFENEEGSDEIKIPNLIETFEQAFQNYPEI
LREIQKQGFTKPSPIQCQAWPILLSGQDLIGIAQTGTGKTLAFLLPALIHIDGQITPRDE
RPGPNVLVMAPTRELALQIEKEVGKYSYRGIKAVCVYGGGNRKEQINIVTKGVQIVIATP
GRLNDLVQAGVLNVSAVTYLILDEADRMLDMGFEPQIRKTLLGVRPDRQTVMTSATWPQG
VRRLAQSYMKNPIQVCVGSLDLAAVHTVTQKICMINEDEKLDMMHQFFREMGSYDKVIVF
FGKKAKVDDISSDLALSKIDCQSIHGDREQADREQALEDLKTGAVQILLATDVASRGIDI
EDITHVLNYDFPKDIEEYVHRVGRTGRAGRTGESITFMTRQDWHHAKELINILEEANQEV
PEELYKMAERYEVWKQKKDSERSYLRNSRDGNRSRDGNRSRQGYNRSRW
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacaggtgggaaagtaacagaacatcatcaagatatgatcaatcatcacaaaga
tatgatcaaaattcatcgcaaagatatgatcaaaattcatcgcaaagatatgatcaaaat
tcatcgcaaagatatgatcaaaattcatcgcaaagatatgatcaaaattcatcgcaaaga
tatgatcaaaattctcgcaattggggaggaaccaatagagacagaagagacagtcagaga
cactataatagatcgtccagtgataactggaatagtgactcaaatactcaaatctatagt
aatagttcacgtaagaggagtaatgatgattcaaatgatacaaatgaacttgttatgtac
attgatgccaacaatgttggaagacttatcggaaagggtggcagcaaaattaaagctctg
caagatgaaagcaatgctaagatcaatattgacaaacaatcaagtgaaaatggacagact
gctgtgaaattaattggtacagatgaagcgcagcaacgagctaaaaatttaatagaggaa
ctattaattgatagaaatatttcacatcaaaatgtagaatctgatcaaaggagagaaact
aattttgaacaaaagaagcaagaaattgattggaatagttttgattggaccaaagccaat
gaagaatatgaaaatcgtcagaaggaaagatgggcaactttgcctcctattataaagaac
ttttacaaagaagatccagctgttgctaatatgtcaaaagcgaaaatagccgaactaaaa
aaaatcaacaataatatagaagttaaatatgttttcgaaaacgaagaaggttctgacgag
ataaaaataccgaatcttattgaaacttttgaacaagctttccaaaattatccagaaatc
cttagagaaatacaaaaacagggatttacaaaaccaagtcctatacaatgtcaagcatgg
cctattttattgagtggtcaagatcttatcgggatagcgcaaactggaactggaaaaact
cttgcttttttactgcctgctttgatccatatcgatgggcaaataactccacgcgacgag
cgccctgggccaaatgttctcgttatggcaccgacgagagaattggcgttgcaaattgag
aaagaagtaggaaaatattcttatcgcggcattaaagcggtgtgcgtatacggtggcgga
aatcgcaaagaacaaatcaatattgtaacaaaaggcgtgcaaatagtaattgcgactcct
gggagattaaatgacttggtacaagcaggagtgttgaatgtatcagctgtaacatatctc
atacttgacgaagccgatcgtatgctggatatgggttttgaaccacaaattcgtaaaacc
ttactgggtgtgcgaccagatagacaaactgttatgacaagcgctacatggcctcaaggt
gtaagacgcttagctcaatcatacatgaaaaatccgattcaagtatgtgttggatcactt
gatttagcagctgttcacactgtaacacaaaagatttgtatgattaatgaagatgaaaaa
ttagatatgatgcatcagttctttcgtgagatgggctcttatgataaggtgatagtattt
tttggtaaaaaggcaaaagtggacgatatctctagtgatctagctttgtcgaaaatagat
tgtcaaagcattcacggtgatagagagcaagcagacagagaacaagcattagaagatcta
aaaactggggcggttcagattcttcttgcgaccgatgtagcaagtcgaggaatcgatatt
gaagacattacacatgtattaaattatgattttccaaaagatatagaggaatacgttcac
agagttggacgtactggacgcgcgggtcgaacaggtgaaagtatcactttcatgacaaga
caagactggcatcatgctaaggaacttatcaatattcttgaagaggctaatcaagaagta
cctgaagaattatacaaaatggctgaaagatatgaagtgtggaagcagaagaaagattca
gaacgatcctatttaagaaatagtagagatggaaacagaagtagagatggcaacagaagt
agacaaggctacaatcgtagccgatggtaa
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integrated database retrieval system
