Camponotus floridanus (Florida carpenter ant): 105259054
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Entry
105259054 CDS
T03919
Name
(RefSeq) transcription elongation factor SPT6 isoform X2
KO
K11292
transcription elongation factor SPT6
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfo03021
]
105259054
03036 Chromosome and associated proteins [BR:
cfo03036
]
105259054
Transcription machinery [BR:
cfo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105259054
Chromosome and associated proteins [BR:
cfo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105259054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
HHH_9
HHH_3
SH2
Tex_YqgF
Spt6_S1
HTH_10
Tex_N
Motif
Other DBs
NCBI-GeneID:
105259054
NCBI-ProteinID:
XP_011269066
LinkDB
All DBs
Position
Unknown
AA seq
1769 aa
AA seq
DB search
MAQYLDSEADVSEGEEELDQNEKKKLKKLKAMEESDEEEEDDEDQLREELKDLIDDNPIE
ESEGEDSDGSDHHKKRKQSDDEDFDDRLEDEDYDLIEENLGVRLERKRFKRLRRIQDEES
EEEQEKEMDDERDAIANELFEGSGDERDLITEDERRSERSHRPEAETFEEGSDEGEYTDA
DDFIVDDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEEEEE
EDEYLDEDVDTERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEVRNTDIPERM
QLRSVPVTSVPEGSDELDLEAEWIYKQAFCKPTISIQDAHLNAEAKERARKGPQTIGKIK
KALDFMRNQHFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLFEKM
RNYQLDEIMKNPDAPLPDNIRLIKDDDIERLKNVQTSEELSDVYHHFMLYYSHQISAMQE
AVRQKEKEARREERIQRRKQQIAEAEENGEDPPEEEEAQEEEEADDTLKQAVRSGPYSIC
RKAGLDGLAKKFGLTPEHYAENLRDNYQRHEVDQEPTEPTTIANEYCSSRFKTAEEILKA
SQLMVAIQLAREPLVRKCVREMYMERAKISVKPTKKGIKEIDENHPIYTMKYLKDKPVRD
LVGVQFLNLVIAEDDKLITITLSDSIEGNTSSNYVDEMKQLYCRDEFSKLVQDWNALRVG
SVELALNRMVIPHLKKELRTNLIAEAKECVMRACCRKMYNWIKVAPYICEFPEEEDEEWD
TSKGLRVMGLAYVPDYSQAAFTCLVAADGECTDYLRLAHLMKRKNSYREDEKAMKEADLL
ALKNFIATKKPHVIVIAGESREANMIADDIRECITNLTGEEQFPSIQVEIYDNELAKIYS
NSNKGVSEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLRYHSLQDQLPKEEL
LENLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRLENR
TQLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDAL
EYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNSRYKD
LRVPYQSPNAEKLFDVLTKETPETFYVGKLVLATVVGISHRKPQGDQLDQANPVRNEETC
LWQCPFCLKNDFPELSEVWNHFDAGACPGKAVGVRLRLDNGISGYIHIKNLSDRHVANPC
ERVGMGQIIHCRIIKIEVDRFSVECTSKSSDLADKNHEWRPQRDPFYDTETEQKDMKVEE
DAKKAKQRQIYVKRVIVHPSFHNISFAETVKLMQTMKQGEAIVRPSSKGADHLTVTWKVT
DDILQHIDVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKYYKP
SVEGIKDKAEEILKEQKKENPGGIPYIISAARTYPGKFLLSYLPRTRCRHEYVTVTSEGF
KFRGQMFGRVSDLLRWFKEHFRDPVPGQSTPSTPRGAMTSRTPYTTTPGAVSGMNQEAIQ
RVAQNLPHHMLHSLSQVANQTPHHYPPHTPGTAGAAGYGGVHTYPNTPYTPSGQTPFMTP
YQTPHHTPHHGQPTPRYGQQTPSHHQGPFVHPPPPSMTPGHHRSAQSHRPTPPLSTPSGD
PTDWKKAAEAWARLKSNPRVSGSTPRYEESRKTPRNYEESVGRTTPSGRSRPSSARTPSY
KSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtacctggactctgaggcggacgtgagcgagggagaggaggaattggatcaa
aatgagaagaagaaactgaagaagctaaaggcgatggaggaaagcgacgaagaggaggaa
gatgatgaagatcaattacgtgaagaattgaaagatttgatagatgacaatcctatagag
gaaagtgaaggtgaagacagtgatggttcggatcatcataaaaaacgtaaacaaagtgat
gacgaggattttgatgatcgcttggaagatgaagattatgatttgattgaggaaaattta
ggtgttagacttgaaaggaaacgttttaaacgtcttcgaaggattcaggatgaagaatcg
gaagaagaacaagaaaaagaaatggatgatgaaagggatgccattgccaatgaattattt
gaaggttctggagatgaaagggatcttatcacggaggatgaaaggcgaagcgaacgtagt
catagaccagaggcagaaaccttcgaagaaggtagtgatgaaggagagtacactgacgca
gatgattttatcgttgacgacgatggcagacctattgcagagaaaaggaagaagaagaag
ccaatattttcggatgcagcgttacaggaagcgcaagatattttcggtgttgatttcgat
tacgatgaatttggtaagtacggcgaggaggattatgaggaggaagaagaggaggaggaa
gaggatgaatacttagatgaagatgtcgacaccgaacggccgcgacgacctaaaaagcag
ctgaagaaaaagacgacgagaaagagtatctttgagatttatgagcccagcgaattgaaa
cgtggtcactttactgatatggataacgaggtacgcaacacggatataccagaaagaatg
caactgcgatctgtaccagtcacatcagtcccagagggttccgacgaacttgatctcgag
gcggaatggatttacaagcaagcattttgcaagcctacaatttcgattcaagatgctcat
ttgaacgccgaagctaaggaacgagcgcgaaagggaccacaaactatcggcaaaatcaag
aaagccttagatttcatgcgcaatcaacactttgaggtcccttttatatctttttatagg
aaggaatacgtgttgcccgagttaaatattaatgatctgtggaaagtatacaagtttgat
gcgaaatggtgtcaattacgccaacggaaggaaaatttacttaaactgtttgaaaagatg
cgcaactatcaactggatgaaattatgaaaaatccggatgcgccgctgccggataacata
cgattgatcaaggatgatgacattgagcggctgaaaaatgtgcagacaagtgaggagctc
agtgatgtctatcatcatttcatgttgtattattctcaccagatttcagcgatgcaggaa
gccgtgcgacagaaggagaaagaggcacggcgtgaagaaaggattcagcggcgcaaacaa
caaattgccgaagcggaagaaaatggagaagatccgccggaagaagaagaggcgcaggag
gaagaggaagccgatgacacactgaagcaagcggtgagaagcggtccgtattccatctgc
cggaaagccggcctggatggtctggcgaagaaattcggcctgacacccgaacactacgcc
gagaatctacgcgacaattatcagcgtcacgaggtggatcaagagccaactgaaccaaca
acgatcgcaaacgaatactgtagttcacgattcaagaccgcagaggaaatattgaaagcc
tctcagttgatggtagcgattcagcttgcacgtgagccactcgtgcgtaaatgcgtacgc
gagatgtacatggaacgcgccaagatttctgtgaaaccgacgaaaaagggcatcaaggag
atcgacgaaaatcaccccatttacactatgaaatacttgaaggacaaaccagtacgtgat
cttgtgggtgttcaatttttgaatttagtgattgccgaagatgataaactcatcacgatt
actctcagtgactcgatcgaaggtaataccagcagcaattacgtagatgagatgaaacaa
ctctattgccgagatgagttcagcaaactcgtgcaggattggaatgcattacgcgttggt
agcgtcgagctcgcacttaatcgcatggtaataccgcatttgaagaaagagttacgcaca
aatttgattgctgaagcaaaggaatgcgtaatgcgcgcatgttgccgcaagatgtataat
tggatcaaagttgcaccatacatctgcgagtttcccgaggaagaggacgaagaatgggac
accagtaaaggtcttcgcgtcatgggtttggcttatgtgcccgattattctcaggcagcc
tttacctgtctggtcgcagctgatggcgaatgcacggattatttgcgtctggcgcatctg
atgaaacgcaaaaatagttatcgcgaggatgaaaaggcaatgaaggaagctgacttgctg
gcgctgaaaaacttcatagccacgaagaagccgcatgttatagtaatagccggcgagtcc
cgagaggcgaatatgattgctgatgacatcagggaatgcatcactaatttaacaggagag
gagcagtttccttctatccaagtagaaatctatgacaatgagcttgcaaagatctattcc
aacagtaacaagggtgtttcggaattccgggattatccagaactattacgtcaggccatt
tcattggcgagaagaatgcaggatccgttagtagaattttcgcaattatgcactgcggac
gaggaaattctttgcctcagatatcacagtctgcaggatcaactacccaaagaagagtta
ttggagaatttgtatttggagttcgtcaatcgtgtgaacgaggttggcgtagatgtgaac
aaagcagttcaacaagcatactgcggcaaccttgttcaattcgtttgcggtcttggcccg
cgaaaaggtcaagcgttaatcaaaatgctgaagcagacgaatcagcggctggagaacagg
acgcagttagttactgcgtgtcatatgggaccgaaagtatttatcaattgcgccggcttc
attaagatcgataccaatagtctgggcgacagtaccgaggcatatgtagaggtactcgat
ggctcacgtgtgcatcccgaaacttacgaatgggcgaggaaaatggcagttgacgcacta
gaatatgatgatgaagacgctaatcccgccggtgctcttgaggagatacttgaatcaccg
gaacgtctgaaggacttagatctagacgcttttgcggaggagcttgagcgacagggtttc
ggcaacaagtgtgtcactttatacgacatcagggccgagttgaatagtcgctacaaggat
ctccgtgtgccgtatcaatcgccaaacgcagaaaaattgtttgatgtcctgacgaaggag
acgccagagactttctatgtcggaaaactagtgctggccacagtggttggcatcagtcac
aggaaaccgcagggtgatcaactcgatcaggcaaatccggtgcgaaatgaagagacctgc
ttgtggcaatgtccgttctgcctgaaaaatgattttcccgaattatcagaggtgtggaat
cactttgacgctggcgcttgtccaggcaaggccgtcggtgtaagattgcgactggacaat
ggtatatctggctatattcatatcaaaaatttatccgatcgacacgttgcaaatccttgc
gaaagagtcggtatgggacaaatcattcattgccgtatcattaaaatcgaagtggatcga
ttcagtgttgagtgcactagcaagagtagtgatctagctgacaaaaatcatgaatggaga
ccgcaacgggatccattttacgatactgagactgaacagaaggatatgaaagtagaagag
gacgcgaagaaagcgaagcagcgacaaatttatgtgaagcgtgtaattgtccatccgtct
ttccataacattagttttgctgaaaccgtaaaactaatgcagacaatgaaacaaggcgaa
gcgatagtcagaccgagcagcaaaggtgccgatcatttaacagttacatggaaggtcacc
gatgatattctccaacacattgacgttcgcgaggagggcaaagaaaatgccttctcgttg
ggacaaagtctttggataggtaatgaggagttcgaggatctggatgaaataattgcccga
cacgttaatcccatggctgcttatgcctccgaattactagattttaagtattataagcca
tccgtggagggaatcaaagacaaagcggaagaaatattaaaggaacagaagaaggagaac
cctggtggaattccctatataatatcggcagctaggacctatcctgggaaattccttctc
tcgtatttgcctcgcactcgttgccgtcatgaatatgtcacagtgacgtccgaaggcttt
aaattccggggacaaatgtttggtagagtgagcgacttgttacgctggttcaaagaacat
ttcagagatccagtgcccggacaatccacacccagtacaccacgcggcgcgatgacttct
agaacaccttacactactacgccgggagcagtcagtggaatgaatcaagaggcaatccag
cgagtcgcacagaatcttccacatcacatgctgcattcgttgtcacaagtggcgaatcag
acaccgcatcactatccgccgcacaccccagggacggcgggtgctgccggttacggcgga
gtgcacacgtatccgaacacaccatatacgccgtctggtcagaccccgttcatgactcca
tatcaaacgcctcatcatacaccgcatcatggtcaacctactcctagatacggccaacaa
acaccaagccatcatcaaggacccttcgtgcatccgccgccaccctcgatgacacccggt
catcacagatccgctcaatcgcatagacctacgccacccttatccactccctccggcgat
ccaacagactggaaaaaagcggctgaagcgtgggcacgtctaaaaagtaatccccgagtc
tctggatcaacgcccagatacgaagaatctagaaaaaccccgcgtaattacgaagagtct
gtcggcagaacgacgccatctggaaggagcagaccttcgtctgcgcggactccttcgtat
aagtcaccacgaggtaccccacatacaaattctagtccacgaagtatgtccctcagcggg
gatggtactcctctgtatgatgaaagctaa
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integrated database retrieval system
